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1.
Theor Biol Med Model ; 12: 18, 2015 Sep 17.
Artigo em Inglês | MEDLINE | ID: mdl-26376851

RESUMO

BACKGROUND: Functional information is normally communicated using specific, context-dependent strings of symbolic characters. This is true within the human realm (texts and computer programs), and also within the biological realm (nucleic acids and proteins). In biology, strings of nucleotides encode much of the information within living cells. How do such information-bearing nucleotide strings arise and become established? METHODS: This paper uses comprehensive numerical simulation to understand what types of nucleotide strings can realistically be established via the mutation/selection process, given a reasonable timeframe. The program Mendel's Accountant realistically simulates the mutation/selection process, and was modified so that a starting string of nucleotides could be specified, and a corresponding target string of nucleotides could be specified. We simulated a classic pre-human hominin population of at least 10,000 individuals, with a generation time of 20 years, and with very strong selection (50% selective elimination). Random point mutations were generated within the starting string. Whenever an instance of the target string arose, all individuals carrying the target string were assigned a specified reproductive advantage. When natural selection had successfully amplified an instance of the target string to the point of fixation, the experiment was halted, and the waiting time statistics were tabulated. Using this methodology we tested the effect of mutation rate, string length, fitness benefit, and population size on waiting time to fixation. RESULTS: Biologically realistic numerical simulations revealed that a population of this type required inordinately long waiting times to establish even the shortest nucleotide strings. To establish a string of two nucleotides required on average 84 million years. To establish a string of five nucleotides required on average 2 billion years. We found that waiting times were reduced by higher mutation rates, stronger fitness benefits, and larger population sizes. However, even using the most generous feasible parameters settings, the waiting time required to establish any specific nucleotide string within this type of population was consistently prohibitive. CONCLUSION: We show that the waiting time problem is a significant constraint on the macroevolution of the classic hominin population. Routine establishment of specific beneficial strings of two or more nucleotides becomes very problematic.


Assuntos
Biologia Computacional/métodos , Hominidae/genética , Modelos Biológicos , Animais , Simulação por Computador , Taxa de Mutação , Nucleotídeos/genética , Densidade Demográfica , Fatores de Tempo
2.
Nature ; 421(6919): 143-6, 2003 Jan 09.
Artigo em Inglês | MEDLINE | ID: mdl-12520295

RESUMO

Although the Moon currently has no internally generated magnetic field, palaeomagnetic data, combined with radiometric ages of Apollo samples, provide evidence for such a magnetic field from approximately 3.9 to 3.6 billion years (Gyr) ago, possibly owing to an ancient lunar dynamo. But the presence of a lunar dynamo during this time period is difficult to explain, because thermal evolution models for the Moon yield insufficient core heat flux to power a dynamo after approximately 4.2 Gyr ago. Here we show that a transient increase in core heat flux after an overturn of an initially stratified lunar mantle might explain the existence and timing of an early lunar dynamo. Using a three-dimensional spherical convection model, we show that a dense layer, enriched in radioactive elements (a 'thermal blanket'), at the base of the lunar mantle can initially prevent core cooling, thereby inhibiting core convection and magnetic field generation. Subsequent radioactive heating progressively increases the buoyancy of the thermal blanket, ultimately causing it to rise back into the mantle. The removal of the thermal blanket, proposed to explain the eruption of thorium- and titanium-rich lunar mare basalts, plausibly results in a core heat flux sufficient to power a short-lived lunar dynamo.

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