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1.
Appl Environ Microbiol ; 73(24): 7934-46, 2007 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-17965213

RESUMO

Edwardsiella ictaluri is the leading cause of mortality in channel catfish culture, but little is known about its pathogenesis. The use of signature-tagged mutagenesis in a waterborne infection model resulted in the identification of 50 mutants that were unable to infect/survive in catfish. Nineteen had minitransposon insertions in miscellaneous genes in the chromosome, 10 were in genes that matched to hypothetical proteins, and 13 were in genes that had no significant matches in the NCBI databases. Eight insertions were in genes encoding proteins associated with virulence in other pathogens, including three in genes involved in lipopolysaccharide biosynthesis, three in genes involved in type III secretion systems (TTSS), and two in genes involved in urease activity. With the use of a sequence from a lambda clone carrying several TTSS genes, Blastn analysis of the partially completed E. ictaluri genome identified a 26,135-bp pathogenicity island containing 33 genes of a TTSS with similarity to the Salmonella pathogenicity island 2 class of TTSS. The characterization of a TTSS apparatus mutant indicated that it retained its ability to invade catfish cell lines and macrophages but was defective in intracellular replication. The mutant also invaded catfish tissues in numbers equal to those of invading wild-type E. ictaluri bacteria but replicated poorly and was slowly cleared from the tissues, while the wild type increased in number.


Assuntos
Proteínas de Transporte/genética , Edwardsiella ictaluri/genética , Edwardsiella ictaluri/patogenicidade , Ilhas Genômicas , Mutagênese Insercional/métodos , Fatores de Virulência/genética , Animais , Proteínas de Bactérias/genética , Linhagem Celular , Contagem de Colônia Microbiana , Elementos de DNA Transponíveis/genética , Infecções por Enterobacteriaceae/microbiologia , Ictaluridae/microbiologia , Rim/microbiologia , Macrófagos/microbiologia , Salmonella/genética
2.
Science ; 307(5713): 1311-3, 2005 Feb 25.
Artigo em Inglês | MEDLINE | ID: mdl-15731455

RESUMO

The genomic diversity and relative importance of distinct genotypes within natural bacterial populations have remained largely unknown. Here, we analyze the diversity and annual dynamics of a group of coastal bacterioplankton (greater than 99% 16S ribosomal RNA identity to Vibrio splendidus). We show that this group consists of at least a thousand distinct genotypes, each occurring at extremely low environmental concentrations (on average less than one cell per milliliter). Overall, the genomes show extensive allelic diversity and size variation. Individual genotypes rarely recurred in samples, and allelic distribution did not show spatial or temporal substructure. Ecological considerations suggest that much genotypic and possibly phenotypic variation within natural populations should be considered neutral.


Assuntos
Ecossistema , Variação Genética , Plâncton/genética , Água do Mar/microbiologia , Vibrio/genética , Alelos , Chaperonina 60/genética , Eletroforese em Gel de Campo Pulsado , Genoma Bacteriano , Genótipo , Dados de Sequência Molecular , Plâncton/classificação , Plâncton/crescimento & desenvolvimento , Plâncton/isolamento & purificação , Reação em Cadeia da Polimerase , Ribotipagem , Fatores de Tempo , Vibrio/classificação , Vibrio/isolamento & purificação
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