Dysregulation of DGCR6 and DGCR6L: psychopathological outcomes in chromosome 22q11.2 deletion syndrome.

Chromosome 22q11.2 deletion syndrome (22q11DS) is the most common microdeletion syndrome in humans. It is typified by highly variable symptoms, which might be explained by epigenetic regulation of genes in the interval. Using computational algorithms, our laboratory previously predicted that DiGeorge critical region 6 (DGCR6), which lies within the deletion interval, is imprinted in humans. Expression and epigenetic regulation of this gene have not, however, been examined in 22q11DS subjects. The purpose of this study was to determine if the expression levels of DGCR6 and its duplicate copy DGCR6L in 22q11DS subjects are associated with the parent-of-origin of the deletion and childhood psychopathologies. Our investigation showed no evidence of parent-of-origin-related differences in expression of both DGCR6 and DGCR6L. However, we found that the variability in DGCR6 expression was significantly greater in 22q11DS children than in age and gender-matched control individuals. Children with 22q11DS who had anxiety disorders had significantly lower DGCR6 expression, especially in subjects with the deletion on the maternal chromosome, despite the lack of imprinting. Our findings indicate that epigenetic mechanisms other than imprinting contribute to the dysregulation of these genes and the associated childhood psychopathologies observed in individuals with 22q11DS. Further studies are now needed to test the usefulness of DGCR6 and DGCR6L expression and alterations in the epigenome at these loci in predicting childhood anxiety and associated adult-onset pathologies in 22q11DS subjects.

Phylogeography and molecular epidemiology of Papaya ringspot virus.

Papaya ringspot virus (PRSV) is the most important virus affecting papaya and cucurbit plants in tropical and subtropical areas. PRSV isolates are divided into biotypes P and W: both the P and W types naturally infect plants in the family Cucurbitaceae, whereas the P type naturally infects papaya (Carica papaya). Understanding the origin and nature of the PRSV genetic diversity and evolution is critical for the implementation of control strategies based on cross-protection and the deployment of transgenic plants that show resistance to virus isolates highly similar to the transgene. The molecular epidemiology of PRSV was evaluated by analyzing the nucleotide sequence of the capsid protein (CP) and helper component-proteinase (HC-Pro) genes of isolates from around the world, including newly characterized ones from Colombia and Venezuela, using a relaxed molecular clock-based approach and a phylogeographic study. Our results confirm previous estimates on the origin of PRSV around 400 years ago and suggest distinct dispersion events from the Indian Peninsula to the rest of Asia, via Thailand, and subsequently to the Americas. A historical reconstruction of the P- and W-type characters in the phylogenetic study supports the need to revise the hypothesis that PRSV-P derives from PRSV-W since our results suggest that the ancestral state could be either of the two biotypes. Moreover, estimates of epidemic growth predict an increasing genetic diversity of the virus over time that has direct implications for control strategies of PRSV based on cross-protection and the use of transgenic plants.

First Report of Late Blight Caused by Phytophthora infestans on Cape Gooseberry (Physalis peruviana) in Colombia.

Late blight caused by Phytophthora infestans is the most limiting disease for several species of the Solanaceae family in Colombia. A potential host for P. infestans is Cape gooseberry (Physalis peruviana), a species belonging to the Solanaceae family. Its center of origin is the highlands of Peru and it is grown at approximately 1,500 to 3,000 m above sea level. Cape gooseberry has become an important export fruit in Colombia. Consequently, in the last few years, the area cultivated with Physalis peruviana has increased dramatically. P. infestans was isolated from this crop in the province of Cundinamarca, Colombia. Symptoms caused by this oomycete appeared initially on the leaf margins as small, irregular, necrotic spots that expanded and merged, increasing the necrotic area. These spots had a soft texture resulting from the degradation of plant tissue by the pathogen. On old lesions, white mycelia and sporangia were observed. Affected plants were rarely killed, but under favorable conditions, severe symptoms were observed in leaves and yield was reduced. Ten isolates were obtained from infected tissue by placing a lesion directly on a potato slice in a moist chamber (2). Mycelia grown on the potato slice were then transferred to rye agar. Identification of the pathogen was performed based on morphological characteristics, specifically, sporangiophores of P. infestans are compoundly branched and develop sympodially, with swellings at the points where sporangia were attached (1). Further confirmation was obtained by sequencing the internal transcribed spacer (ITS) regions (GenBank Accession Nos. EF173467-EF173476). Koch's postulates were completed in the laboratory by spray inoculating detached leaves of Cape gooseberry with a zoospore suspension obtained from each of the 10 isolates. Inoculum was prepared by flooding 10-day-old cultures with sterile distilled water to obtain a 104/ml sporangial suspension followed by zoospore induction at 4°C. Leaves were sprayed with this suspension, placed in moist chambers, and incubated at 20°C in the dark. Control leaves were sprayed with sterile distilled water. Two separate leaves were inoculated with each isolate. The pathogen was reisolated from leaf lesions in all cases. The period between infection and the appearance of symptoms ranged from 5 to 7 days. To our knowledge, this is the first report of P. infestans causing damage on Cape gooseberry in Colombia. Chemical control measures are to some extent successfully applied in most regions where solanaceous crops are grown in Colombia. Nevertheless, suitable disease management for Physalis peruviana has not been achieved and further studies on the epidemiology of the disease on this new host are needed. References: (1) D. C. Erwin and O. K. Ribeiro. Phytophthora Diseases Worldwide. The American Phytopathological Society. St. Paul, MN, 1996. (2) G. A. Forbes et al. Phytopathology 87:375, 1997.

avrPto enhances growth and necrosis caused by Pseudomonas syringae pv.tomato in tomato lines lacking either Pto or Prf.

AvrPto was introduced into three tomato genotypes with two biotic agents to study its role in compatible interactions. avrPto enhanced the capacity of the Pseudomonas syringae pv. tomato strain T1 to induce necrotic symptoms on tomato plants that lacked either Pto or Prf genes. The enhanced necrosis correlated with a small increase in bacterial growth. In planta expression of avrPto in isolation did not elicit necrosis in the absence of a functional Prf gene.