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1.
Biophys J ; 81(6): 3442-55, 2001 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11721006

RESUMO

The structure of an early M-intermediate of the wild-type bacteriorhodopsin photocycle formed by actinic illumination at 230 K has been determined by x-ray crystallography to a resolution of 2.0 A. Three-dimensional crystals were trapped by illuminating with actinic light at 230 K, followed by quenching in liquid nitrogen. Amide I, amide II, and other infrared absorption bands, recorded from single bacteriorhodopsin crystals, confirm that the M-substate formed represents a structure that occurs early after deprotonation of the Schiff base. Rotation about the retinal C13-C14 double bond appears to be complete, but a relatively large torsion angle of 26 degrees is still seen for the C14-C15 bond. The intramolecular stress associated with the isomerization of retinal and the subsequent deprotonation of the Schiff base generates numerous small but experimentally measurable structural changes within the protein. Many of the residues that are displaced during the formation of the late M (M(N)) substate formed by three-dimensional crystals of the D96N mutant (Luecke et al., 1999b) are positioned, in early M, between their resting-state locations and the ones which they will adopt at the end of the M phase. The relatively small magnitude of atomic displacements observed in this intermediate, and the well-defined positions adopted by nearly all of the atoms in the structure, may make the formation of this structure favorable to model (simulate) by molecular dynamics.


Assuntos
Bacteriorodopsinas/fisiologia , Luz , Bacteriorodopsinas/química , Sítios de Ligação , Cristalografia por Raios X , Halobacterium/metabolismo , Modelos Moleculares , Fotoquímica , Conformação Proteica , Estrutura Secundária de Proteína , Espectroscopia de Infravermelho com Transformada de Fourier , Difração de Raios X/instrumentação , Difração de Raios X/métodos
2.
Biochim Biophys Acta ; 1460(1): 106-18, 2000 Aug 30.
Artigo em Inglês | MEDLINE | ID: mdl-10984594

RESUMO

In the photocycle of bacteriorhodopsin (bR), light-induced transfer of a proton from the Schiff base to an acceptor group located in the extracellular half of the protein, followed by reprotonation from the cytoplasmic side, are key steps in vectorial proton pumping. Between the deprotonation and reprotonation events, bR is in the M state. Diverse experiments undertaken to characterize the M state support a model in which the M state is not a static entity, but rather a progression of two or more functional substates. Structural changes occurring in the M state and in the entire photocycle of wild-type bR can be understood in the context of a model which reconciles the chloride ion-pumping phenotype of mutants D85S and D85T with the fact that bR creates a transmembrane proton-motive force.


Assuntos
Bacteriorodopsinas/química , Bombas de Íon/química , Cinética , Luz , Fotoquímica , Conformação Proteica , Bombas de Próton/química , Bases de Schiff/química , Espectrofotometria Infravermelho , Terminologia como Assunto
3.
J Reconstr Microsurg ; 14(5): 313-6, 1998 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-9714036

RESUMO

The time at which critical thrombosis occurred was assessed in a group of 63 patients (76 digits) following replantation surgery. The influence of smoking and mechanism of injury were examined with respect to the risk of thrombosis. The highest risk of critical thrombosis after replantation occurred in the first 3 days after surgery, although some risk remained up to 2 weeks. The higher risk of late failure in smokers may represent the effects of a return to smoking after discharge. Mechanism of injury did not appear to affect the timing of critical thrombosis. This report should help surgeons plan the timing of discharge against the known ongoing risk of replantation failure. Strong advice against resumption of smoking seems to be appropriate.


Assuntos
Traumatismos dos Dedos/cirurgia , Reimplante , Trombose/etiologia , Adolescente , Adulto , Idoso , Amputação Traumática/complicações , Amputação Traumática/cirurgia , Criança , Bases de Dados como Assunto , Feminino , Traumatismos dos Dedos/etiologia , Dedos/irrigação sanguínea , Seguimentos , Sobrevivência de Enxerto , Humanos , Isquemia/etiologia , Masculino , Pessoa de Meia-Idade , Necrose , Alta do Paciente , Reimplante/efeitos adversos , Fatores de Risco , Fumar/efeitos adversos , Fatores de Tempo , Resultado do Tratamento , Ferimentos não Penetrantes/complicações , Ferimentos não Penetrantes/cirurgia
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