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1.
Mol Phylogenet Evol ; 178: 107631, 2023 01.
Artigo em Inglês | MEDLINE | ID: mdl-36162736

RESUMO

Even though the monophyletic status of Achiridae has been supported by morphological and molecular data, the interrelationships within the representatives of this family are poorly resolved. In the present study, we carried out the most complete molecular phylogenetic analysis of this group, encompassing all genera and employing both nuclear (Rhodopsin, Recombination activator [Rag 1], Mixed - lineage Leukemia [MLL] and Early Growth Response Protein 3 [EGR3]) and mitochondrial (Cytochrome C Oxidase Subunit I [COI], Cytochrome B [CytB], ATPase 6.8, 16S and 12S RNAr) genes. All topologies based on Maximum Likelihood, Bayesian inferences and Bayesian Inference of the Multispecies Coalescent confirmed the monophyletism of Achiridae, in spite of some incongruences in relation to Achirus mucuri, A. lineatus, Apionichthys finis and Trinectes microphthalmus. In fact, Achirus and Trinectes proved to be non-monophyletic genera while Hypoclinemus mentalis was closely related to A. achirus, suggesting this species should be reevaluated. We provided evidence that Achiridae has first arisen in estuaries (about 23.5 million years ago) and some lineages have evolved independently to either marine or freshwater habitats. Furthermore, we propose a diversification scenario of New World soles involving at least two events of marine incursions during Miocene and Pliocene - Pleistocene associated with natural geographic barriers (Victoria-Trindade chain), the width and exposure of continental shelf and headwater capture along the Amazon basin. Finally, the evolutionary dependence of Achirid soles on estuaries, characterized as highly dynamic environments, has probably driven the recent divergence of many species of Achiridae.


Assuntos
Linguados , Linguado , Animais , Filogenia , Linguados/genética , Teorema de Bayes , Citocromos b/genética , Ecossistema
2.
Genet Mol Biol ; 44(4): e20200068, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34821336

RESUMO

Doradinae (Siluriformes: Doradidae) is the most species-rich subfamily among thorny catfishes, encompassing over 77 valid species, found mainly in Amazon and Platina hydrographic basins. Here, we analyzed seven Doradinae species using combined methods (e.g., cytogenetic tools and Mesquite ancestral reconstruction software) in order to scrutinize the processes that mediated the karyotype diversification in this subfamily. Our ancestral reconstruction recovered that 2n=58 chromosomes and simple nucleolar organizer regions (NOR) are ancestral features only for Wertheimerinae and the most clades of Doradinae. Some exceptions were found in Trachydoras paraguayensis (2n=56), Trachydoras steindachneri (2n=60), Ossancora punctata (2n=66) and Platydoras hancockii whose karyotypes showed a multiple NOR system. The large thorny catfishes, such as Pterodoras granulosus, Oxydoras niger and Centrodoras brachiatus share several karyotype features, with subtle variations only regarding their heterochromatin distribution. On the other hand, a remarkable karyotypic variability has been reported in the fimbriate barbells thorny catfishes. These two contrasting karyoevolution trajectories emerged from a complex interaction between chromosome rearrangements (e.g., inversions and Robertsonian translocations) and mechanisms of heterochromatin dispersion. Moreover, we believe that biological features, such as microhabitats preferences, populational size, low vagility and migratory behavior played a key role during the origin and maintenance of chromosome diversity in Doradinae subfamily.

3.
J Hered ; 108(3): 239-253, 2017 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-28182237

RESUMO

The wrasses (family Labridae) represent a suitable model to understand chromosomal evolution and to test the efficacy of cytotaxonomy since they display a remarkable karyotypic variation, rarely reported in marine Perciformes, as well as a high number of species and complex systematics. Therefore, we provided new chromosomal data in 5 labrids from South Atlantic (Doratonotus megalepis, Halichoeres dimidiatus, Halichoeres penrosei, Thalassoma noronhanum, and Xyrichtys novacula) and carried out a detailed comparative analysis of karyotypic data in Labridae using multivariate approaches. Basal diploid values (2n = 48) were observed in most of species studied in the present work but D. megalepis (2n = 46), along with distinct karyotype formulae. Single 18S rDNA sites interspersed with GC-rich heterochromatin were also commonly reported except for both Halichoeres species (2 18S rDNA-bearing pairs), following a species-specific pattern. These data show the high rates of chromosomal evolution in wrasses, ranging from microstructural rearrangements to centric fusions. A revision of chromosomal data in Labridae based on multivariate analysis of 74 taxa allowed inferring karyoevolutionary trends within tribes and genera of wrasses. The dendrogram obtained was in agreement with recent systematic hypotheses. In spite of the independent occurrence of some chromosomal rearrangements, karyoevolutionary trends could be identified within tribes of Labridae. Moreover, the karyotypic features are also suitable as cytotaxonomic markers of wrasses.


Assuntos
Cromossomos , Classificação , Perciformes , Animais , Evolução Biológica , Perciformes/genética
4.
Zebrafish ; 14(1): 90-95, 2017 02.
Artigo em Inglês | MEDLINE | ID: mdl-27676413

RESUMO

American soles (family Achiridae) have been characterized by remarkable chromosomal variation even though several species lack basic cytogenetic information. This trend indicates that chromosomal traits can be useful to taxonomy once the morphological identification of some taxa in this family (e.g., Achirus species) is controversial. In this work, we expand the cytogenetic data in Achiridae by providing the first karyotypic analysis of Achirus achirus. An unusual multiple sex chromosome system (X1X1X2X2/X1X2Y) was detected, once males presented 2n = 33 with three unpaired chromosomes (X1X2Y) while females presented 2n = 34 with two acrocentric pairs (X1X1 and X2X2) found in hemizygosis in males. The 18S rDNA clusters were observed interspersed with GC-rich sites in a single pair. However, the 5S rRNA genes were dispersed through the genome of A. achirus in a sex-specific manner (10 clusters in males and 12 in females), as a result of the presence of ribosomal cistrons in X1 and X2 chromosomes. This pattern allowed us to infer that Y chromosome has evolved by partial deletion followed by fusion of proto-X1 and proto-X2 homologous chromosomes. The high rate of genomic evolution in Achiridae could have favored their reproductive isolation and speciation even in sympatric conditions.


Assuntos
DNA Ribossômico/genética , Linguados/genética , Fluxo Gênico , Cariotipagem/métodos , Proteínas Ribossômicas/genética , Cromossomos Sexuais , Animais , Evolução Biológica , Feminino , Linguados/classificação , Heterocromatina , Masculino
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