Potentially pathogenic bacteria in the plastisphere from water, sediments, and commercial fish in a tropical coastal lagoon: An assessment and management proposal.

Microplastics in aquatic ecosystems harbor numerous microorganisms, including pathogenic species. The ingestion of these microplastics by commercial fish poses a threat to the ecosystem and human livelihood. Coastal lagoons are highly vulnerable to microplastic and microbiological pollution, yet limited understanding of the risks complicates management. Here, we present the main bacterial groups, including potentially pathogenic species, identified on microplastics in waters, sediments, and commercial fish from Ciénaga Grande de Santa Marta (CGSM), the largest coastal lagoon in Colombia. DNA metabarcoding allowed identifying 1760 bacterial genera on microplastics, with Aeromonas and Acinetobacter as the most frequent and present in all three matrices. The greatest bacterial richness and diversity were recorded on microplastics from sediments, followed by waters and fish. Biochemical analyses yielded 19 species of potentially pathogenic culturable bacteria on microplastics. Aeromonas caviae was the most frequent and, along with Pantoea sp., was found on microplastics in all three matrices. Enterobacter roggenkampii and Pseudomonas fluorescens were also found on microplastics from waters and fish. We propose management strategies for an Early Warning System against microbiological and microplastic pollution risks in coastal lagoons, illustrated by CGSM. This includes forming inter-institutional alliances for research and monitoring, accompanied by strengthening governance and health infrastructures.

OCURRENCIA Y DISTRIBUCIÓN DE Vibrio cholerae CULTIVABLE EN LA CIÉNAGA GRANDE DE SANTA MARTA, CARIBE COLOMBIANO / Occurrence and distribution of cultivable Vibrio cholerae in Ciénaga Grande De Santa Marta, Colombian Caribbean

RESUMEN Vibrio cholerae es un potencial patógeno humano que habita ambientes acuáticos, aunque su presencia y abundancia se ha asociado al aumento de la temperatura del agua, poco se ha investigado sobre su ecología en ambientes estuarinos tropicales, donde los cambios de salinidad suelen ser más importantes. El presente estudio evaluó la distribución de V. cholerae en la Ciénaga Grande de Santa Marta, Colombia y su relación con la temperatura y la salinidad. Para ello, entre 2016 y 2018 se cuantificó bimestralmente esta especie en muestras de agua superficial, usando agar TCBS y pruebas bioquímicas. V. cholerae se detectó en 57 de 198 muestras (28,8 %), variando en densidad entre 5 y 54 800 UFC por 100 mL. Entre enero y septiembre de 2016 se presentó una alta salinidad promedio mensual (≥ 28,7) y una baja detección de la bacteria (0,01 %). La salinidad promedio se redujo drásticamente en noviembre de 2016 (9,6), coincidiendo con una proliferación de V. cholerae (promedio geométrico 36,4 UFC/100 mL). Durante 2017 y 2018 la salinidad promedio se mantuvo por debajo de 15,2 y la detección de V. cholerae fue mayor (39,4 %) que, en 2016, presentándose mayores densidades en los meses con menor salinidad. En las estaciones denominadas BVA y NVE, donde se ubican poblaciones palafíticas, se registraron las densidades promedio (geométrico) más altas, 25,3 UFC/100 mL y 15,4 UFC/ 100 mL, respectivamente. Los resultados de este estudio demuestran que la salinidad juega un papel determinante en la ocurrencia y abundancia de V. cholerae en esta laguna tropical.

ABSTRACT Vibrio cholerae is a potential human pathogen that inhabits aquatic environments, although its presence and abundance have been associated with increased water temperature, little research has been done on its ecology in tropical estuarine environments, where salinity changes tend to be more important. The present study evaluated the distribution of V. cholerae in the Ciénaga Grande de Santa Marta and its relationship with temperature and salinity; For this, between 2016 and 2018 this microorganism was quantified bimonthly in surface water samples, using TCBS agar and biochemical tests. V. cholerae was detected in 57 of 198 samples (28.8 %), varying in density between 5 CFU / 100 mL and 54,800 CFU / 100 mL. Between January and September 2016 there was a high average monthly salinity (≥ 28.7 °C) and a low detection of the bacteria (0.01 %). Average salinity dropped drastically in November 2016 (9.6), coinciding with a proliferation of V. cholerae (geometric average 36.4 CFU / 100 mL). During 2017 and 2018, the average salinity remained below 15.2 and the detection of V. cholerae was higher (39.4 %) than in 2016, with higher densities in the months with lower salinity. At the BVA and NVE stations, where palaphytic populations are located, the highest average (geometric) densities were recorded, 25.3 CFU / 100mL and 15.4 CFU / 100mL, respectively. The results of this study show that salinity plays a determining role in the occurrence and abundance of V. cholerae in this tropical lagoon.

Microplastic pollution in water, sediments and commercial fish species from Ciénaga Grande de Santa Marta lagoon complex, Colombian Caribbean.

Microplastics are emerging pollutants that have been found in different environmental matrices of marine and coastal ecosystems, where they can generate harmful ecological impacts. Little is known about the current state of microplastic pollution in fragile tropical lagoon ecosystems, such as Ciénaga Grande de Santa Marta (CGSM) in the Caribbean coast of Colombia. This study assesses microplastic pollution in surface waters and sediments, and the occurrence of microplastic ingestion in commercially important fish species from CGSM. In waters, microplastic abundances ranged from 0.0 to 0.3 items L-1 while in sediments they varied from 0.0 to 3.1 items kg-1. The most abundant types of microplastics are fibers and fragments, with polypropylene, polyethylene and high-density polyethylene as the most abundant polymers. Also, 100 (i.e. 21.1%) out of 474 individuals from nine fish species had microplastics in their digestive tracts. Microplastics present in water and sediments and in the digestive tract of the analyzed fish species have similar characteristics, also showing a moderate and statistically significant association. Microplastic abundances are higher near river mouths and in urban areas with a high density of fishing activities and aquaculture infrastructures, which are important sources of contaminants. Microplastic pollution in CGSM represents a threat to the lagoon ecosystem and to local people depending on artisanal fishing. Consequently, effective actions to reduce pollution and its socio-environmental impacts are urgently required.

Comparative Genomics of Clinical and Environmental Isolates of Vibrio spp. of Colombia: Implications of Traits Associated with Virulence and Resistance.

There is widespread concern about the increase in cases of human and animal infections caused by pathogenic Vibrio species due to the emergence of epidemic lineages. In Colombia, active surveillance by the National Institute of Health (INS) has confirmed the presence of Vibrio; however, in routine surveillance, these isolates are not genomically characterized. This study focused on the pangenome analysis of six Vibrio species: V. parahaemolyticus, V. vulnificus, V. alginolyticus, V. fluvialis, V. diabolicus and V. furnissii to determine the genetic architectures of potentially virulent and antimicrobial resistance traits. Isolates from environmental and clinical samples were genome sequenced, assembled and annotated. The most important species in public health were further characterized by multilocus sequence typing and phylogenomics. For V. parahaemolyticus, we found the virulent ST3 and ST120 genotypes. For V. vulnificus, we identified isolates belonging to lineages 1 and 2. Virulence gene homologues between species were found even in non-pathogenic species such as V. diabolicus. Annotations related to the mobilome, integrative mobile and conjugative elements and resistance genes were obtained from environmental and clinical isolates. This study contributes genomic information to the intensified surveillance program implemented by the INS to establish potential sources of vibriosis in Colombia.