Pollen production in olive cultivars and its interannual variability.

BACKGROUND AND AIMS: Olive (Olea europaea subsp. europaea var. europaea) is the most extensively cultivated fruit crop worldwide. It is considered a wind-pollinated and strictly outcrossing crop. Thus, elevated pollen production is crucial to guarantee optimum fruit set and yield. Despite these facts, the variability of pollen production within the cultivated olive has been scarcely studied. This study aimed to characterize this feature by analysing a representative set of worldwide olive cultivars. METHODS: We evaluated the average number of pollen grains per anther in 57 principal cultivars over three consecutive years. We applied a standard generalized linear model (GLM) approach to study the influence of cultivar, year and the previous year's fruit load on the amount of pollen per anther. Additionally, the K-means method was used for cluster analysis to group cultivars based on their pollen production capacity. KEY RESULTS: Pollen production per anther was highly variable among olive cultivars. The cultivar significantly accounted for 51.3 % of the variance in pollen production and the year for 0.3 %. The interaction between the two factors explained 8.4 % of the variance, indicating that not all cultivars were equally stable in producing pollen across the years. The previous year's fruit load and its interaction with the year were significant, but barely accounted for 1.5 % of the variance. Olive cultivars were classified into four clusters according to their capacity to produce pollen. Interestingly, the fourth cluster was composed of male-sterile cultivars, which presumably share this character by inheritance. CONCLUSIONS: Pollen production per anther varied extensively within the cultivated olive. This variation was mainly driven by the cultivar and its interaction with the year. The differential capacity of olive cultivars to produce pollen should be considered not only for designing new orchards but also gardens where this species is used as an ornamental.

Graft Survival in Patients Who Received Second Allograft, Comparing Those With or Without Previous Failed Allograft Nephrectomy.

INTRODUCTION: Nowadays, the number of patients receiving a second graft is growing, and the management of failed grafts is still controversial. OBJECTIVE: Our objective was to analyze the influence of graft nephrectomy on graft and patient survival. MATERIALS AND METHODS: We retrospectively evaluated the demographic features and graft outcomes of 63 recipients who received second allografts between August 1985 and April 2013. They were divided into two groups: group A, those who underwent nephrectomy of failed graft (n = 21, 33.3%), and group B, those whose failed graft was retained (n = 42, 66.6%). χ2 and Mann-Whitney U tests were used to compare demographic characteristics and graft features in both groups. Kaplan-Meier test was used to analyze graft and patient survival. Finally, univariate and multivariate analysis was done using Cox regression. RESULTS: Demographic characteristics of donor and receptors were similar in both groups. Overall panel-reactive antibody (P = .040) showed statistically significant differences between groups (72.0 ± 25.3 in group A and 54.8 ± 30.0 in group B). Hemodialysis duration was longer in group A (P = .023, 112.2 ± 72.8 vs 70.9 ± 66.9 months). The percentage of patients who had delayed graft function was higher in group A (58.8% vs 27.3%, P = .029). Kaplan-Meier test found no differences between groups (P = .344); group A, 107.4 months (95% confidence interval [CI] 74.0 to 140.8) and group B, 82.7 months (95% CI 62.5 to 102.8). We found no differences in terms of patient survival (P = .798) with the Kaplan-Meier test. In group A, patient survival was 164.5 months (CI 137.7 to 191.31) and in group B, 152.0 months (95% CI 125.5 to 178.5). CONCLUSIONS: Failed graft nephrectomy did not show a negative impact on graft and patient survival.

A simple, fast, and inexpensive CTAB-PVP-silica based method for genomic DNA isolation from single, small insect larvae and pupae.

In this study, we report a modified CTAB-PVP method combined with silicon dioxide (silica) treatment for the extraction of high quality genomic DNA from a single larva or pupa. This method efficiently obtains DNA from small specimens, which is difficult and challenging because of the small amount of starting tissue. Maceration with liquid nitrogen, phenol treatment, and the ethanol precipitation step are eliminated using this methodology. The A260/A280 absorbance ratios of the isolated DNA were approximately 1.8, suggesting that the DNA is pure and can be used for further molecular analysis. The quality of the isolated DNA permits molecular applications and represents a fast, cheap, and effective alternative method for laboratories with low budgets.

Macaria mirthae Vargas et al (Lepidoptera: Geometridae): Confirmation of the Use of an Invasive Host Plant in the Northern Atacama Desert of Chile Based on DNA Barcodes.

Macaria mirthae Vargas et al (Lepidoptera: Geometridae) is a geometrid moth native to the northern Atacama Desert of Chile. Its oligophagous larvae are associated with native hosts of the plant family Fabaceae, the most important of which is Acacia macracantha. The invasive tree Leucaena leucocephala (Fabaceae) was recently recorded as a host plant for M. mirthae based on morphology. The taxonomic status of larvae collected on A. macracantha and L. leucocephala was assessed using sequences of the DNA barcode fragment of the cytochrome c oxidase subunit I (COI) gene. Genetic divergence between samples from the host plants was found to be 0%-0.8% (Kimura 2-parameter model). Neighbor-joining and maximum likelihood analyses were also performed, including additional barcode sequences of Neotropical geometrid moths from GenBank and BOLD databases. Sequences of the larvae from both host plants clustered in a single clade with high statistical support in both analyses. Based on these results, it is concluded that M. mirthae has effectively expanded its host range and its larvae are currently feeding on the exotic tree L. leucocephala. Additionally, the importance of this new host association in a highly disturbed habitat is briefly discussed in terms of the field biology of this native geometrid moth.

Novel anti-fatty acid synthase compounds with anti-cancer activity in HER2+ breast cancer.

Fatty acid synthase (FASN) expression and activity has emerged as a common phenotype in most human carcinomas, including breast cancer, and its expression is tightly linked to HER2 signaling pathways. The development of inhibitors of FASN activity has consequently appeared as a novel antitarget modality for treating cancer. However, the clinical use of FASN inhibitors, such as cerulenin, C75, and epigallocatechin 3-gallate (EGCG), is limited by anorexia and induced body weight loss or by its low in vivo potency and stability. Here, we summarize the design and development of G28UCM, the lead-compound of a novel family of synthetic FASN inhibitors, with both in vitro and in vivo activity in a human breast cancer model of FASN(+) and HER2(+) .

Population dynamics of the rat Microryzomys minutus (Rodentia: Muridae) in the Venezuelan Andes

The population dynamics of the small forest rice rat Microryzomys minutus, a murid rodent that occurs in the high altitudes of the northern and central Andes, was studied in disturbed and primary environments in a cloud forest of the Venezuelan Andes (Juan Pablo Peñaloza National Park, 8 degrees 11'N, 71 degrees 49'W). We collected 121 animals (66 female female and 55 male male) between 1995 and 1998, using pitfall traps with formalin. Adult males were heavier than adult females. Relative abundance was much greater in the disturbed environments (over 10 individuals in some periods) than in the primary cloud forest: 4-8 individuals. In the disturbed environments, the rats were extremely abundant in the first sampling period, and less frequent afterwards. In the cropland, abundance showed some fluctuations during the study and displayed two small abundance peaks in March-June 1997 and 1998. In the mined area, the rats had irregular fluctuations until March-June 1997 and were not recorded in July-October 1997. The occurrence of this rat in both disturbed and natural habitats confirms the wide ecological tolerance of this species.

Se analizó la dinámica poblacional de las pequeñas ratas silvestres del arroz Microryzomys minutus en ambientes alterados y primarios, en un bosque nublado de los Andes venezolanos. El estudio fue basado en 121 animales(66 [hembra hembra] y 55 [macho macho] ) recolectados entre 1995 y 1998, usando trampas que contenían formalina. Esta especie está presente en ambos hábitats lo que confirma su ampliatolerancia ecológica. La abundancia poblacional fue mayor en ambientes alterados que en los no alterados. M. minutus presenta dimorfismo sexual en el peso: los machos son más pesados que las hembras.

Discriminant snakes for 3D reconstruction of anatomical organs.

In this work a new statistic deformable model for 3D segmentation of anatomical organs in medical images is proposed. A statistic discriminant snake performs a supervised learning of the object boundary in an image slice to segment the next slice of the image sequence. Each part of the object boundary is projected in a feature space generated by a bank of Gaussian filters. Then, clusters corresponding to different boundary pieces are constructed by means of linear discriminant analysis. Finally, a parametric classifier is generated from each contour in the image slice and embodied into the snake energy-minimization process to guide the snake deformation in the next image slice. The discriminant snake selects and classifies image features by the parametric classifier and deforms to minimize the dissimilarity between the learned and found image features. The new approach is of particular interest for segmenting 3D images with anisotropic spatial resolution, and for tracking temporal image sequences. In particular, several anatomical organs from different imaging modalities are segmented and the results compared to expert tracings.

Biology of Triatoma flavida Neiva, 1911 (Hemiptera: Reduviidae) under laboratory conditions.

The complete life cycle of Triatoma flavida, weekly fed on hens, was studied at 28+/-2 degrees C and 80+/-10% RH. Aspects related to hatching, life span, mortality and feeding behavior for each stage of its life cycle were evaluated. The hatching rate observed for 100 eggs was 93% with an average incubation period of 27.2 days. Sixty-two nymphs completed the cycle and the mean egg to adult development time was 230.4 days. Mean duration of 1st, 2nd, 3rd, 4th and 5th instar nymphs was 22.1, 25.3, 36.7, 49.7 and 69.4 days, respectively. The number of blood meals on each nymphal stage varied from 1 to 7. The mortality rate was 6.5% for NI, 23% for NIII and 7.5% for NV nymphs. Mean number of laid eggs per female was 283.1. Adult survival rates were 344.8 +/- 256.4 days for males and 285.3 +/- 201.8 days for females.

Resistance to starvation of Rhodnius neivai Lent, 1953 (Hemiptera: Reduviidae: Triatominae) under experimental conditions.

The period of resistance to starvation and the loss of weight until death of Rhodnius neivai in all stages of development were studied. Work was based on experiments conducted under controlled laboratory conditions. One hundred specimens of each nymphal instar were observed: 50 were fed on chicken and 50 on rabbit. Adult females and males were kept together and fed on each host. All bugs were weighed weekly until death. Laid eggs were collected weekly and observed during five weeks to obtain hatchability. Resistance to starvation was similar with both hosts and increased with the evolutionary stage, excepting the 5th nymphal instar and adults. With both hosts, loss of weight was abrupt in the first week and steady in the following weeks. In adults, on the first weeks after eating, there was little or no mortality, after which mortality increased rapidly with the starving time. Reproductive output was higher in the bugs fed on rabbit. R. neivai is among the least resistant triatomine species.

Effects of environmental temperature on life tables of Rhodnius neivai Lent, 1953 (Hemiptera: Reduviidae) under experimental conditions.

Changes in life tables of Rhodnius neivai due to variations of environmental temperature were studied, based on nine cohorts. Three cohorts were kept at 22 degrees C, three at 27 degrees C and three at 32 degrees C. Cohorts were censused daily during nymphal instars and weekly in adults. Nine complete horizontal life tables were built. A high negative correlation between temperature and age at first laying was registered (r=-0,84). Age at maximum reproduction was significantly lower at 32 degrees C. Average number of eggs/female/week and total eggs/female on its life time were significantly lower at 22 degrees C. Total number of egg by cohort and total number of reproductive weeks were significantly higher at 27 degrees C. At 32 degrees C, generational time was significantly lower. At 27 degrees C net reproductive rate and total reproductive value were significantly higher. At 22 degrees C, intrinsic growth, finite growth and finite birth rates were significantly lower. At 22 degrees C, death instantaneous rate was significantly higher.

Automatic segmentation of lung fields on chest radiographic images.

In this work we have implemented a system for the automatic segmentation of lung fields in chest radiographic images. The image analysis process is carried out in three levels. In the first one we perform operations on the image that are independent from domain knowledge. This knowledge is implicitly and not very elaborately used in the intermediate level and used in an explicit manner in the high level block, globally corresponding to the idea of progressive segmentation. The representation of knowledge in the high level block is in the form of production rules. The control structure is in general bottom-up but there are certain hybrid control stages, in which the control is driven by the region model (main organs) we are seeking. We have applied the global system to a set of 45 posteroanterior (PA) chest radiographs, obtaining a mean degree of overlap with contours drawn by radiologists of 87%.

Computer-aided diagnoses: automatic detection of lung nodules.

This work describes a computational scheme for automatic detection of suspected lung nodules in a chest radiograph. A knowledge-based system extracts the lung masks over which we will apply the nodule detection process. First we obtain the normalized cross-correlation image. Next we detect suspicious regions by assuming a threshold. We examine the suspicious regions using a variable threshold which results in the growth of the suspicious areas and an increase in false positives. We reduce the large number of false positives by applying the facet model to the suspicious regions of the image. An algorithmic classification process gives a confidence factor that a suspicious region is a nodule. Five chest images containing 30 known nodules were used as a training set. We evaluated the system by analyzing 30 chest images with 40 confirmed nodules of varying contrast and size located in various parts of the lungs. The system detected 100% of the nodules with a mean of six false positives per image. The accuracy and specificity were 96%.

Vital statistics of Panstronglus geniculatus (Latreille 1811) (Hemiptera: Reduviidae) under experimental conditions.

A statistical evaluation of the population dynamics of Panstrongylus geniculatus is based on a cohort experiment conducted under controlled laboratory conditions. Animals were fed on hen every 15 days. Egg incubation took 21 days; mean duration of 1st, 2nd, 3rd, 4th, and 5th instar nymphs was 25, 30, 58, 62, and 67 days, respectively; mean nymphal development time was 39 weeks and adult longevity was 72 weeks. Females reproduced during 30 weeks, producing an average of 61.6 eggs for female on its lifetime; the average number of eggs/female/week was 2.1. Total number of eggs produced by the cohort was 1379. Average hatch for the cohort was 88.9%; it was not affected by age of the mother. Age specific survival and reproduction tables were constructed. The following population parameters were evaluated, generation time was 36.1 weeks; net reproduction rate was 89.4; intrinsic rate of natural increase was 0.125; instantaneous birth and death rates were 0.163 and 0.039 respectively; finite rate of increase 1.13; total reproductive value was 1196 and stable age distribution was 31.2% eggs, 64.7% nymphs and 4.1% adults. Finally the population characteristics of P. geniculatus lead to the conclusion that this species is a K strategist.

A Markov random field model for bony tissue classification.

3D biomedical images are a valuable source of information for clinical diagnosis. In areas such as bone remodeling, fracture prediction and prosthesis design, the external geometry of the bones needs to be precisely defined and injuries identified. A system that automatically interprets and presents a 3D reconstruction of the bone can be very useful, although this task cannot be carried out without specific knowledge of the domain. This knowledge may be represented by a set of constraints over properties and relationships between regions. In this work we present a Markov random field model for identification of injuries in the proximal tibia.

Computer-aided diagnosis: a neural-network-based approach to lung nodule detection.

In this work, we have developed a computer-aided diagnosis system, based on a two-level artificial neural network (ANN) architecture. This was trained, tested, and evaluated specifically on the problem of detecting lung cancer nodules found on digitized chest radiographs. The first ANN performs the detection of suspicious regions in a low-resolution image. The input to the second ANN are the curvature peaks computed for all pixels in each suspicious region. This comes from the fact that small tumors possess and identifiable signature in curvature-peak feature space, where curvature is the local curvature of the image data when viewed as a relief map. The output of this network is thresholded at a chosen level of significance to give a positive detection. Tests are performed using 60 radiographs taken from routine clinic with 90 real nodules and 288 simulated nodules. We employed free-response receiver operating characteristics method with the mean number of false positives (FP's) and the sensitivity as performance indexes to evaluate all the simulation results. The combination of the two networks provide results of 89%-96% sensitivity and 5-7 FP's/image, depending on the size of the nodules.

Fuzzy K-nearest neighbor classifiers for ventricular arrhythmia detection.

We report a study of the efficiency of 4 classifiers (the K-nearest-neighbor and single-nearest-prototype algorithms, each as parametrized by both Fuzzy C-Means and Fuzzy Covariance clustering) in the detection of ventricular arrhythmias in ECG traces characterized by 4 features derived from 7 spectral parameters. Principal components analysis was used in conjunction with a cardiologist's deterministic classification of 90 ECG traces to fix the number of trace classes to 5 (ventricular fibrillation/flutter, sinus rhythm, ventricular rhythms with aberrant complexes and 2 classes of artefact). Forty of the 90 traces were then defined as a test set; 5 different learning sets (numbering 25, 30, 35, 40 and 45 traces) were randomly selected from the remaining 50 traces; each learning set was used to parametrize both the classification algorithms using both fuzzy clustering algorithms and the parametrized classification algorithms were then applied to the test set. Optimal K for K-nearest-neighbor algorithms and optimal cluster volumes for Fuzzy Covariance algorithms were sought by trial and error to minimize classification differences with respect to the cardiologist's classification. Fuzzy Covariance clustering afforded significantly better perception of cluster structure than the Fuzzy C-Means algorithm, and the classifiers performed correspondingly with an overall empirical error ratio of just 0.10 for the K-nearest-neighbor algorithm parametrized by Fuzzy Covariance.

Algorithmic sequential decision-making in the frequency domain for life threatening ventricular arrhythmias and imitative artefacts: a diagnostic system.

A preliminary study to approach the problem of reliably detecting life threatening ventricular arrhythmias in real time is described. An algorithm (DIAGNOSIS) has been developed in order to classify ECG signal records on the basis of the computation of four simple parameters calculated from a representation in the frequency domain. This algorithm uses a set of rules constituting an operative classification scheme based on the comparison of the parameters with a set of pre-established thresholds. This allows us to differentiate four general categories: ventricular fibrillation-flutter, ventricular rhythms, imitative artefacts and predominant sinus rhythm.

Efecto de la frequencia alimentaria sobre algunos parametros poblacionales de Rhodnius neivai / The effect of feeding frequency on some population parameters of Rhodnius neivai

Modificando la frecuencia de oferta de alimento a semanal y quincenal se evaluó estadisticamente la variación de algunos parámetros poblacionales y reproductivos en cuatro cohortes de R. neivai alimentadas en gallina o conejo. Se encontró una relación directa entre la frecuencia de oferta de snagre y la longevidad media, longevidad máxima y esperanza de vida de los adultos en los ejemplares que se alimentaron en gallina. En cambio, en los animales a los cuales se ofreció sangre de conejo quincenalmente, los valores de longevidad media, longevidad máxima y esperanza de vida de los adultos fueron altos, y algo menores en los alimentados semanalmente. El rendimiento reproductivo aumentó y la fertilidad edad-específica mostró una cierta disminución cuando la frecuencia de oferta de alimento fue semanal. Todos los parámetros poblacionales, menos el tiempo generacional, fueron mayores en los ejemplares alimentados semanalmente

[The effect of feeding frequency on some population parameters of Rhodnius neivai]. / Efecto de la frecuencia alimentaria sobre algunos parametros poblacionales de Rhodnius neivai.

After changing feeding frequency to a weekly and biweekly basis, a statistical evaluation of the variation of some population and reproductive parameters was conducted. It was based on four cohorts experiments of Rhodnius neivai fed on hen or rabbit. We found a direct relationship between blood feeding frequency and the parameters adult average longevity, maximum longevity and life expectancy in the animals fed on hen. On the other hand, in the insect fed biweekly on rabbit, these three values were higher than the registered in the cohorts fed weekly. Reproductive output got bigger and age-specific fertility showed a small decrease when feeding frequency was weekly. Every population parameter, except generation time, was greater in the individuals fed weekly.

Estadisticas vitales de Rhodnius neivai Lent, 1953 (Hemiptera: Reduviidae) en condiciones experimentales / Vital statistic of Rhodnius neivai Lent, 1953 (Hemiptera: Reduviidae) under experimental conditions

Seguimos seis linhagens de Rhodmius neivai em laboratório para avaliar estatisticamente sua dinâmica populacional. Utilizamos duas fontes de alimentos: galinha e coelho. Determinam a porcentagem de eclosäo dos ovos, mortalidade e tempo de desenvolvimento ninfal, mortalidade idade-específica dos adultos, fecundidade e fertilidade idade-específica das fêmeas. Avaliamos, também, alguns parâmetros populacionais, como expectativa de vida, taxa de reproduçäo, taxa finita de crescimento, valor reprodutivo e distribuiçäo estável de idades. A duraçäo do ciclo de vida foi maior nos alimentados em coelho. A sobrevivência ninfal foi ligeiramente maior nos indivíduos alimentados em galinha. A reproduçäo começou antes nos exemplares alimentados em galinha, mas o rendimento reprodutivo e a duraçäo da oviposiçäo foram maiores nos alimentados em coelho. As taxas intrínseca e finita de crescimento foram maiores nos triatomíneos alimentados em galinha. O tempo geracional foi ligeiramente maior nas linhagens alimentadas em coelho. A taxa de reproduçäo foi muito semelhante com ambas as fontes alimentares, embora ligeiramente maior nos exemplares alimentados em coelho. O valor reprodutivo nos alimentos em coelho foi o dobro do obtivo para os que se alimentavam em galinha