Pointers toward the occurrence of C-F...F-C interaction: Experimental charge density analysis of 1-(4-fluorophenyl)-3,6,6-trimethyl-2-phenyl-1,5,6,7-tetrahydro-4H-indol-4-one and 1-(4-fluorophenyl)-6-methoxy-2-phenyl-1,2,3,4-tetrahydroisoquinoline.

A charge density study of crystalline 1-(4-fluorophenyl)-3,6,6-trimethyl-2-phenyl-1,5,6,7-tetrahydro-4H-indol-4-one (A) and 1-(4-fluorophenyl)-6-methoxy-2-phenyl-1,2,3,4-tetrahydroisoquinoline (B) has been carried out using high-resolution X-ray diffraction data collected at 113(2) K. Weak intermolecular interactions of the type C-H...O, C-H...pi, and pi...pi hold the molecules together in the crystal lattice along with interactions of the type C-H...F and unusual C-F...F-C examined via charge density analysis. The topological features are evaluated in terms of Bader's theory of atoms in molecules through the first four criteria of Koch and Popelier. The C-F...F-C contact is observed to be across the center of symmetry in B and not in A, and further, this interaction appears to possess a certain correlation with the electron density properties at the critical point which suggests that such an interaction fits into the hierarchy of weak interactions.

Generation of azines by the reaction of a nucleophilic carbene with diazoalkanes: a synthetic and crystallographic study.

Reactions of the nucleophilic carbene 1,3-dimesityl-imidazol-2-ylidene (1) with diazofluorene, diphenyldiazomethane, and azidotrimethylsilane were examined. Specifically, carbene 1 reacts with diazofluorene and diphenyldiazomethane to give addition products (azines: 3 and 4, respectively). Compounds 3 and 4 were further characterized in the solid-state by single-crystal X-ray crystallographic studies. [3 (a = 9.7936(6) A, b = 10.0529(7) A, c = 16.251(1) A, alpha = 75.765(1) degrees, beta = 79.711(1) degrees, gamma = 64.321(1) degrees, Z = 2, space group P1); 4 (a = 11.681(3) A, b = 11.861(4) A, c = 21.186(3) A, alpha = 90 degrees, beta = 97.05(2) degrees, gamma = 90 degrees, Z = 4, space group P2(1)/n)]. The structural parameters of 3 and 4 are discussed with reference to previously characterized symmetrical and unsymmetrical azines. Structural data suggest that charge separation is possible in 3.

Bonding, structure, and energetics of gaseous E8(2+) and of solid E8(AsF6)2 (E = S, Se).

The attempt to prepare hitherto unknown homopolyatomic cations of sulfur by the reaction of elemental sulfur with blue S8(AsF6)2 in liquid SO2/SO2ClF, led to red (in transmitted light) crystals identified crystallographically as S8(AsF6)2. The X-ray structure of this salt was redetermined with improved resolution and corrected for librational motion: monoclinic, space group P2(1)/c (No. 14), Z = 8, a = 14.986(2) A, b = 13.396(2) A, c = 16.351(2) A, beta = 108.12(1) degrees. The gas phase structures of E8(2+) and neutral E8 (E = S, Se) were examined by ab initio methods (B3PW91, MPW1PW91) leading to delta fH theta[S8(2+), g] = 2151 kJ/mol and delta fH theta[Se8(2+), g] = 2071 kJ/mol. The observed solid state structures of S8(2+) and Se8(2+) with the unusually long transannular bonds of 2.8-2.9 A were reproduced computationally for the first time, and the E8(2+) dications were shown to be unstable toward all stoichiometrically possible dissociation products En+ and/or E4(2+) [n = 2-7, exothermic by 21-207 kJ/mol (E = S), 6-151 kJ/mol (E = Se)]. Lattice potential energies of the hexafluoroarsenate salts of the latter cations were estimated showing that S8(AsF6)2 [Se8(AsF6)2] is lattice stabilized in the solid state relative to the corresponding AsF6- salts of the stoichiometrically possible dissociation products by at least 116 [204] kJ/mol. The fluoride ion affinity of AsF5(g) was calculated to be 430.5 +/- 5.5 kJ/mol [average B3PW91 and MPW1PW91 with the 6-311 + G(3df) basis set]. The experimental and calculated FT-Raman spectra of E8(AsF6)2 are in good agreement and show the presence of a cross ring vibration with an experimental (calculated, scaled) stretching frequency of 282 (292) cm-1 for S8(2+) and 130 (133) cm-1 for Se8(2+). An atoms in molecules analysis (AIM) of E8(2+) (E = S, Se) gave eight bond critical points between ring atoms and a ninth transannular (E3-E7) bond critical point, as well as three ring and one cage critical points. The cage bonding was supported by a natural bond orbital (NBO) analysis which showed, in addition to the E8 sigma-bonded framework, weak pi bonding around the ring as well as numerous other weak interactions, the strongest of which is the weak transannular E3-E7 [2.86 A (S8(2+), 2.91 A (Se8(2+)] bond. The positive charge is delocalized over all atoms, decreasing the Coulombic repulsion between positively charged atoms relative to that in the less stable S8-like exo-exo E8(2+) isomer. The overall geometry was accounted for by the Wade-Mingos rules, further supporting the case for cage bonding. The bonding in Te8(2+) is similar, but with a stronger transannular E3-E7 (E = Te) bonding. The bonding in E8(2+) (E = S, Se, Te) can also be understood in terms of a sigma-bonded E8 framework with additional bonding and charge delocalization occurring by a combination of transannular n pi *-n pi * (n = 3, 4, 5), and np2-->n sigma * bonding. The classically bonded S8(2+) (Se8(2+) dication containing a short transannular S(+)-S+ (Se(+)-Se+) bond of 2.20 (2.57) A is 29 (6) kJ/mol higher in energy than the observed structure in which the positive charge is delocalized over all eight chalcogen atoms.

Preparation, X-ray crystal structure determination, lattice potential energy, and energetics of formation of the salt S4(AsF6)2.AsF3 containing the lattice-stabilized tetrasulfur [2+] cation. Implications for the understanding of the stability of M(4)2+ and M2+ (M = S, Se, and Te) crystalline salts.

S4(AsF6)2.AsF3 was prepared by the reaction of sulfur with arsenic pentafluroide in liquid AsF3 (quantitatively) and in anhydrous HF in the presence of trace amounts of bromine. A single-crystal X-ray structure of the compound has been determined: monoclinic, space group P2(1)/c, Z = 4, a = 7.886(1) A, b = 9.261(2) A, c = 19.191(3) A, beta = 92.82(1) degrees, V = 1399.9(4) A3, T = 293 K, R1 = 0.052 for 1563 reflections (I > 2 sigma (I) 1580 total and 235 parameters). We report a term-by-term calculation of the lattice potential energy of this salt and also use our generalized equation, which estimates lattice energies to assist in probing the homopolyatomic cation thermochemistry in the solid and the gaseous states. We find S4(AsF6)2.AsF3 to be more stable (delta fH degree [S4(AsF6)2.AsF3,c] approximately -4050 +/- 105 kJ/mol) than either the unsolvated S4(AsF6)2 (delta fH degree [S4(AsF6)2,c] approximately -3104 +/- 117 kJ/mol) by 144 kJ/mol or two moles of S2AsF6 (c) and AsF3 (1) by 362 kJ/mol. The greater stability of the S(4)2+ salt arises because of the greater lattice potential energy of the 1:2 solvated salt (1734 kJ/mol) relative to twice that of the 1:1 salt (2 x 541 = 1082 kJ/mol). The relative lattice stabilization enthalpies of M(4)2+ ions relative to two M2+ ions (i.e., in M4(AsF6)2 (c) with respect to two M2AsF6 (c) (M = S, Se, and Te)) are found to be 218, 289, and 365 kJ/mol, respectively. Evaluation of the thermodynamic data implies that appropriate presently available anions are unlikely to stabilize M2+ in the solid phase. A revised value for delta fH degree [Se4(AsF6)2,c] = -3182 +/- 106 kJ/mol is proposed based on estimates of the lattice energy of Se4(AsF6)2 (c) and a previously calculated gasphase dimerization energy of 2Se2+ to Se(4)2+.

Molecular geometries of dibenzothiazepinone and dibenzoxazepinone calcium antagonists.

A number of dibenzothiazepinones and dibenzoxazepinones have been designed, synthesized and evaluated as calcium antagonists. Molecular geometries of these dibenzotricyclic calcium antagonists have been studied using X-ray crystallography, molecular modeling and two-dimensional NMR spectroscopy. X-Ray diffraction reveals dibenzothiazepinone 1 and dibenzoxazepinone 2 to have, respectively, flexure angles of 108 degrees and 116.9 degrees between the two benzene rings. The molecular mechanics-optimized geometry of dibenzothiazepinone 1 shows a 7 degrees smaller flexure angle than the X-ray crystallographic result, while that of dibenzoxazepinone 2 has an angle only 2 degrees smaller than the X-ray result. AM1 and ab initio calculations show that the side chains can affect the geometry of the tricyclic nucleus and both 1 and 2 have negative electrostatic potentials around the bridged portion of the tricyclics. Two-dimensional NOESY NMR spectroscopy supports the extended geometry of the 6 carbon spacer as obtained from X-ray crystallography and molecular mechanics calculations. Vasorelaxation properties among these compounds appear to be relatively insensitive to the flexure angle and to chain length. Vasorelaxation is profoundly influenced by the nature of the basic terminal moiety.

Proline-containing beta-turns. IV. Crystal and solution conformations of tert.-butyloxycarbonyl-L-prolyl-D-alanine and tert.-butyloxycarbonyl-L-prolyl-D-alanyl-L-alanine.

The conformations of the dipeptide t-Boc-Pro-DAla-OH and the tripeptide t-Boc-Pro-DAla-Ala-OH have been determined in the crystalline state by X-ray diffraction and in solution by CD, n.m.r. and i.r. techniques. The unit cell of the dipeptide crystal contains two independent molecules connected by intermolecular hydrogen bonds. The urethane-proline peptide bond is in the cis orientation in both the molecular forms while the peptide bond between Pro and DAla is in the trans orientation. The single dipeptide molecule exhibits a "bent" structure which approximates to a partial beta-turn. The tripeptide adopts the 4----1 hydrogen-bonded type II beta-turn with all trans peptide bonds. In solution, the CD and i.r. data on the dipeptide indicate an ordered conformation with an intramolecular hydrogen bond. N.m.r. data indicate a significant proportion of the conformer with a trans orientation at the urethane-proline peptide bond. The temperature coefficient of the amide proton of this conformer in DMSO-d6 points to a 3----1 intramolecular hydrogen bond. Taken together, the data on the dipeptide in solution indicate the presence (in addition to the cis conformer) of a C7 conformation which is absent in the crystalline state. The spectral data on the tripeptide indicate the presence of the type II beta-turn in solution in addition to the nonhydrogen-bonded conformer with the cis peptide bond between the urethane and proline residues. The relevance of these data to studies on the substrate specificity of collagen prolylhydroxylase is pointed out.