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1.
Sci. agric ; 79(02): 1-10, 2022. ilus, tab
Artigo em Inglês | VETINDEX | ID: biblio-1498031

RESUMO

Common bean is a worldwide important crop. The development of varieties with durable resistance to diseases is a major challenge in common bean breeding. The present study aimed at evaluating the phenotypic and molecular selection of anthracnose resistance in a population obtained by assisted backcrossing from IAC Formoso (resistant, donor parent) × BRS Pérola (susceptible, recurrent parent). Nine microsatellites (SSRs) and one Sequence Tagged Sites (STS) markers previously linked to ANT resistance were used to genotype this progeny, and the results showed that the selection of the genotypes closest to the donor parent in the BC1F1 population decreased the number of backcrossing cycles necessary to obtain advanced isogenic lines, potentiating the use of this tool for early selection of resistant cultivars. A total of 31 % of the BC1F1 progeny was selected and backcrossed again. The progeny derived from the second backcross (BC2F3) was selected for the Carioca grain ideotype, and 42 % of the genotypes showed high resistance to anthracnose under controlled conditions of infection for races 65 and 81. Superior resistant plants were selected and evaluated under natural conditions of infection to fusarium wilt and angular leaf spot, allowing the selection of two inbred lines with higher resistance to anthracnose, fusarium wilt, angular leaf spot and postharvest quality traits such as yield, 100 seed weight, L value at seed harvest grain darkening and cooking time. The approach outlined in this paper proved to be effective to simultaneously select for disease resistance without losing technological quality aspects of the bean.


Assuntos
Colletotrichum/patogenicidade , Phaseolus/genética , Repetições de Microssatélites/genética , Resistência à Doença
2.
Sci. agric ; 79(2): e20200233, 2022. tab, ilus
Artigo em Inglês | VETINDEX | ID: biblio-1290186

RESUMO

Common bean is a worldwide important crop. The development of varieties with durable resistance to diseases is a major challenge in common bean breeding. The present study aimed at evaluating the phenotypic and molecular selection of anthracnose resistance in a population obtained by assisted backcrossing from IAC Formoso (resistant, donor parent) × BRS Pérola (susceptible, recurrent parent). Nine microsatellites (SSRs) and one Sequence Tagged Sites (STS) markers previously linked to ANT resistance were used to genotype this progeny, and the results showed that the selection of the genotypes closest to the donor parent in the BC1F1 population decreased the number of backcrossing cycles necessary to obtain advanced isogenic lines, potentiating the use of this tool for early selection of resistant cultivars. A total of 31 % of the BC1F1 progeny was selected and backcrossed again. The progeny derived from the second backcross (BC2F3) was selected for the Carioca grain ideotype, and 42 % of the genotypes showed high resistance to anthracnose under controlled conditions of infection for races 65 and 81. Superior resistant plants were selected and evaluated under natural conditions of infection to fusarium wilt and angular leaf spot, allowing the selection of two inbred lines with higher resistance to anthracnose, fusarium wilt, angular leaf spot and postharvest quality traits such as yield, 100 seed weight, L value at seed harvest grain darkening and cooking time. The approach outlined in this paper proved to be effective to simultaneously select for disease resistance without losing technological quality aspects of the bean.


Assuntos
Phaseolus/genética , Endogamia , Repetições de Microssatélites , Fusarium
3.
Sci. agric ; 79(4): e20210016, 2022. tab, graf
Artigo em Inglês | VETINDEX | ID: biblio-1290215

RESUMO

Water deficit can alter the morphological, agronomic, physiological, and technological traits of the common bean plant, affecting bean grain yield. In addition to yield aspects, the grain post-harvest quality is a decisive factor for the adoption of a new cultivar. Thus, this study evaluated the effect of water deficit on the physiological, morphoagronomic, and technological traits of common bean. The experiment was carried out at in a greenhouse in a randomized block design with a 30 × 2 factorial arrangement, consisting of 30 carioca common bean genotypes and two water regimes (with and without water stress), with three replications. The water deficit affected most morphological, agronomic, and physiological traits; however, it was not significant on the darkening of the seed coat. Cultivars IAC 1849 Polaco, ANFc 5, ANFc 9, BRSMG Madrepérola, IAC Carioca Aruã, TAA Dama, and Branquinho exhibited high yield potential under water stress treatment as well as slow seed coat darkening during nine months of storage. The selection of bean genotypes with slow seed coat darkening could be performed at 30 days of storage.


Assuntos
Estresse Fisiológico/fisiologia , Phaseolus/anatomia & histologia , Phaseolus/fisiologia , Melhoramento Vegetal
4.
Sci. agric. ; 79(2)2022.
Artigo em Inglês | VETINDEX | ID: vti-762546

RESUMO

ABSTRACT: Common bean is a worldwide important crop. The development of varieties with durable resistance to diseases is a major challenge in common bean breeding. The present study aimed at evaluating the phenotypic and molecular selection of anthracnose resistance in a population obtained by assisted backcrossing from IAC Formoso (resistant, donor parent) × BRS Pérola (susceptible, recurrent parent). Nine microsatellites (SSRs) and one Sequence Tagged Sites (STS) markers previously linked to ANT resistance were used to genotype this progeny, and the results showed that the selection of the genotypes closest to the donor parent in the BC1F1 population decreased the number of backcrossing cycles necessary to obtain advanced isogenic lines, potentiating the use of this tool for early selection of resistant cultivars. A total of 31 % of the BC1F1 progeny was selected and backcrossed again. The progeny derived from the second backcross (BC2F3) was selected for the Carioca grain ideotype, and 42 % of the genotypes showed high resistance to anthracnose under controlled conditions of infection for races 65 and 81. Superior resistant plants were selected and evaluated under natural conditions of infection to fusarium wilt and angular leaf spot, allowing the selection of two inbred lines with higher resistance to anthracnose, fusarium wilt, angular leaf spot and postharvest quality traits such as yield, 100 seed weight, L value at seed harvest grain darkening and cooking time. The approach outlined in this paper proved to be effective to simultaneously select for disease resistance without losing technological quality aspects of the bean.

5.
J Appl Genet ; 62(4): 585-600, 2021 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-34386968

RESUMO

Brazil is among the largest producers and consumers of common bean (Phaseolus vulgaris L.) and can be considered a secondary center of diversity for the species. The aim of this study was to estimate the genetic diversity, population structure, and relationships among 288 common bean accessions in an American Diversity Panel (ADP) genotyped with 4,042 high-quality single nucleotide polymorphisms (SNPs). The results showed inter-gene pool hybridization (hybrids) between the two main gene pools (i.e., Mesoamerican and Andean), based on principal component analysis (PCA), discriminant analysis of principal components (DAPC), and STRUCTURE analysis. The genetic diversity parameters showed that the Mesoamerican group has higher values of diversity and allelic richness in comparison with the Andean group. Considering the optimal clusters (K), clustering was performed according to the type of grain (i.e., market group), the institution of origin, the period of release, and agronomic traits. A new subset was selected and named the Mesoamerican Diversity Panel (MDP), with 205 Mesoamerican accessions. Analysis of molecular variance (AMOVA) showed low genetic variance between the two panels (i.e., ADP and MDP) with the highest percentage of the limited variance among accessions in each group. The ADP showed occurrence of high genetic differentiation between populations (i.e., Mesoamerican and Andean) and introgression between gene pools in hybrids based on a set of diagnostic SNPs. The MDP showed better linkage disequilibrium (LD) decay. The availability of genetic variation from inter-gene pool hybridizations presents a potential opportunity for breeders towards the development of superior common bean cultivars.


Assuntos
Pool Gênico , Phaseolus , Variação Genética , Genótipo , Repetições de Microssatélites , Phaseolus/genética
6.
BMC Plant Biol ; 21(1): 343, 2021 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-34284717

RESUMO

BACKGROUND: Common bean (Phaseolus vulgaris L.) is a legume whose grain can be stored for months, a common practice among Brazilian growers. Over time, seed coats become darker and harder to cook, traits that are undesirable to consumers, who associate darker-colored beans with greater age. Like commercial pinto and cranberry bean varieties, carioca beans that have darker seeds at harvest time and after storage are subject to decreased market values. RESULTS: The goal of our study was to identify the genetic control associated with lightness of seed coat color at harvest (HL) and with tolerance to post-harvest seed coat darkening (PHD) by a genome-wide association study. For that purpose, a carioca diversity panel previously validated for association mapping studies was used with 138 genotypes and 1,516 high-quality SNPs. The panel was evaluated in two environments using a colorimeter and the CIELAB scale. Shelf storage for 30 days had the most expressive results and the L* (luminosity) parameter led to the greatest discrimination of genotypes. Three QTL were identified for HL, two on chromosome Pv04 and one on Pv10. Regarding PHD, results showed that genetic control differs for L* after 30 days and for the ΔL* (final L*-initial L*); only ΔL* was able to properly express the PHD trait. Four phenotypic classes were proposed, and five QTL were identified through six significant SNPs. CONCLUSIONS: Lightness of seed coat color at harvest showed an oligogenic inheritance corroborated by moderate broad-sense heritability and high genotypic correlation among the experiments. Only three QTL were significant for this trait - two were mapped on Pv04 and one on Pv10. Considering the ΔL, six QTL were mapped on four different chromosomes for PHD. The same HL QTL at the beginning of Pv10 was also associated with ΔL* and could be used as a tool in marker-assisted selection. Several candidate genes were identified and may be useful to accelerate the genetic breeding process.


Assuntos
Phaseolus/crescimento & desenvolvimento , Phaseolus/genética , Pigmentação/genética , Sementes/crescimento & desenvolvimento , Sementes/genética , Brasil , Mapeamento Cromossômico , Produtos Agrícolas/genética , Produtos Agrícolas/crescimento & desenvolvimento , Cruzamentos Genéticos , Frutas , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Variação Genética , Estudo de Associação Genômica Ampla , Genótipo , Fenótipo , Melhoramento Vegetal , Locos de Características Quantitativas , Fatores de Tempo
7.
Genes (Basel) ; 12(5)2021 05 18.
Artigo em Inglês | MEDLINE | ID: mdl-34069884

RESUMO

Fusarium wilt (Fusarium oxysporum f. sp. phaseoli, Fop) is one of the main fungal soil diseases in common bean. The aim of the present study was to identify genomic regions associated with Fop resistance through genome-wide association studies (GWAS) in a Mesoamerican Diversity Panel (MDP) and to identify potential common bean sources of Fop's resistance. The MDP was genotyped with BARCBean6K_3BeadChip and evaluated for Fop resistance with two different monosporic strains using the root-dip method. Disease severity rating (DSR) and the area under the disease progress curve (AUDPC), at 21 days after inoculation (DAI), were used for GWAS performed with FarmCPU model. The p-value of each SNP was determined by resampling method and Bonferroni test. For UFV01 strain, two significant single nucleotide polymorphisms (SNPs) were mapped on the Pv05 and Pv11 for AUDPC, and the same SNP (ss715648096) on Pv11 was associated with AUDPC and DSR. Another SNP, mapped on Pv03, showed significance for DSR. Regarding IAC18001 strain, significant SNPs on Pv03, Pv04, Pv05, Pv07 and on Pv01, Pv05, and Pv10 were observed. Putative candidate genes related to nucleotide-binding sites and carboxy-terminal leucine-rich repeats were identified. The markers may be important future tools for genomic selection to Fop disease resistance in beans.


Assuntos
Resistência à Doença/genética , Fusarium/genética , Genes de Plantas/genética , Phaseolus/genética , Mapeamento Cromossômico/métodos , Cromossomos de Plantas/genética , Estudo de Associação Genômica Ampla/métodos , Genômica/métodos , Genótipo , Doenças das Plantas/genética , Polimorfismo de Nucleotídeo Único/genética
8.
PLoS One ; 16(5): e0251745, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34010322

RESUMO

Brazil is the largest consumer of dry edible beans (Phaseolus vulgaris L.) in the world, 70% of consumption is of the carioca variety. Although the variety has high yield, it is susceptible to several diseases, among them, anthracnose (ANT) can lead to losses of up to 100% of production. The most effective strategy to overcome ANT, a disease caused by the fungus Colletotrichum lindemuthianum, is the development of resistant cultivars. For that reason, the selection of carioca genotypes resistant to multiple ANT races and the identification of loci/markers associated with genetic resistance are extremely important for the genetic breeding process. Using a carioca diversity panel (CDP) with 125 genotypes and genotyped by BeadChip BARCBean6K_3 and a carioca segregating population AM (AND-277 × IAC-Milênio) genotyped by sequencing (GBS). Multiple interval mapping (MIM) and genome-wide association studies (GWAS) were used as mapping tools for the resistance genes to the major ANT physiological races present in the country. In general, 14 single nucleotide polymorphisms (SNPs) showed high significance for resistance by GWAS, and loci associated with multiple races were also identified, as the Co-3 locus. The SNPs ss715642306 and ss715649427 in linkage disequilibrium (LD) at the beginning of chromosome Pv04 were associated with all the races used, and 16 genes known to be related to plant immunity were identified in this region. Using the resistant cultivars and the markers associated with significant quantitative resistance loci (QRL), discriminant analysis of principal components (DAPC) was performed considering the allelic contribution to resistance. Through the DAPC clustering, cultivar sources with high potential for durable anthracnose resistance were recommended. The MIM confirmed the presence of the Co-14 locus in the AND-277 cultivar which revealed that it was the only one associated with resistance to ANT race 81. Three other loci were associated with race 81 on chromosomes Pv03, Pv10, and Pv11. This is the first study to identify new resistance loci in the AND-277 cultivar. Finally, the same Co-14 locus was also significant for the CDP at the end of Pv01. The new SNPs identified, especially those associated with more than one race, present great potential for use in marker-assisted and early selection of inbred lines.


Assuntos
Cromossomos de Plantas/genética , Colletotrichum , Resistência à Doença/genética , Phaseolus , Doenças das Plantas , Polimorfismo de Nucleotídeo Único , Brasil , Marcadores Genéticos , Estudo de Associação Genômica Ampla , Desequilíbrio de Ligação , Phaseolus/genética , Phaseolus/microbiologia , Doenças das Plantas/genética , Doenças das Plantas/microbiologia
9.
Front Plant Sci ; 12: 647043, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33927738

RESUMO

Angular leaf spot (ALS) is a disease that causes major yield losses in the common bean crop. Studies based on different isolates and populations have already been carried out to elucidate the genetic mechanisms of resistance to ALS. However, understanding of the interaction of this resistance with the reproductive stages of common bean is lacking. The aim of the present study was to identify ALS resistance loci at different plant growth stages (PGS) by association and linkage mapping approaches. An BC2F3 inter-gene pool cross population (AND 277 × IAC-Milênio - AM population) profiled with 1,091 SNPs from genotyping by sequencing (GBS) was used for linkage mapping, and a carioca diversity panel (CDP) genotyped by 5,398 SNPs from BeadChip assay technology was used for association mapping. Both populations were evaluated for ALS resistance at the V2 and V3 PGSs (controlled conditions) and R8 PGS (field conditions). Different QTL (quantitative trait loci) were detected for the three PGSs and both populations, showing a different quantitative profile of the disease at different plant growth stages. For the three PGS, multiple interval mapping (MIM) identified seven significant QTL, and the Genome-wide association study (GWAS) identified fourteen associate SNPs. Several loci validated regions of previous studies, and Phg-1, Phg-2, Phg-4, and Phg-5, among the 5 loci of greatest effects reported in the literature, were detected in the CDP. The AND 277 cultivar contained both the Phg-1 and the Phg-5 QTL, which is reported for the first time in the descendant cultivar CAL143 as ALS10.1UC. The novel QTL named ALS11.1AM was located at the beginning of chromosome Pv11. Gene annotation revealed several putative resistance genes involved in the ALS response at the three PGSs, and with the markers and loci identified, new specific molecular markers can be developed, representing a powerful tool for common bean crop improvement and for gain in ALS resistance.

10.
Sci. agric ; 77(3): e20180233, 2020. tab, ilus
Artigo em Inglês | VETINDEX | ID: biblio-1497854

RESUMO

The aim of this study was to investigate the effect of heat stress on 12 bean genotypes through the analysis of their reproductive biology in terms of flowering, pollen viability, meiotic behavior, and production. Plants were grown in a climate chamber at 25-20 °C (day and night) and at a high temperature treatment 37-26 °C (day and night) from the vegetative (V4) development stage to physiological maturity. The experimental design was 2 × 12 factorial arrangement with six replications and the factors consisted of heat treatments and genotypes. In three replications, the number of newly opened flowers was checked daily. At physiological maturity, the following traits were evaluated: percentage of pod set, number of pods, number of viable seeds, number of aborted seeds, 100 seed weight, and seed yield (g per plant). The other three replications were used to collect flowers to create slides to study viability of the pollen grain and analyze the meiotic behavior. The heat treatment factor significantly affected the following traits: total number of pollen grains, number of flowers, number of pods, pod set, number of viable seeds, 100 seed weight, and seed yield. The raised temperature reduced these variables, except for percentage of pod set, and increased meiotic irregularities. The mean values regarding seed yield were 16.39 g per plant for the control treatment and 7.46 g per plant under high temperature. IAC Imperador, FT Nobre, Pérola, BRS Estilo, and IAC Diplomata stood out for higher bean seed yield under increased temperature.


Assuntos
Phaseolus , Pólen , Polinização
11.
Sci. agric. ; 77(3): e20180233, 2020. tab, ilus
Artigo em Inglês | VETINDEX | ID: vti-25046

RESUMO

The aim of this study was to investigate the effect of heat stress on 12 bean genotypes through the analysis of their reproductive biology in terms of flowering, pollen viability, meiotic behavior, and production. Plants were grown in a climate chamber at 25-20 °C (day and night) and at a high temperature treatment 37-26 °C (day and night) from the vegetative (V4) development stage to physiological maturity. The experimental design was 2 × 12 factorial arrangement with six replications and the factors consisted of heat treatments and genotypes. In three replications, the number of newly opened flowers was checked daily. At physiological maturity, the following traits were evaluated: percentage of pod set, number of pods, number of viable seeds, number of aborted seeds, 100 seed weight, and seed yield (g per plant). The other three replications were used to collect flowers to create slides to study viability of the pollen grain and analyze the meiotic behavior. The heat treatment factor significantly affected the following traits: total number of pollen grains, number of flowers, number of pods, pod set, number of viable seeds, 100 seed weight, and seed yield. The raised temperature reduced these variables, except for percentage of pod set, and increased meiotic irregularities. The mean values regarding seed yield were 16.39 g per plant for the control treatment and 7.46 g per plant under high temperature. IAC Imperador, FT Nobre, Pérola, BRS Estilo, and IAC Diplomata stood out for higher bean seed yield under increased temperature.(AU)


Assuntos
Phaseolus , Pólen , Polinização
12.
Sci. agric ; 76(5): 389-397, Sept.-Oct. 2019. tab, graf
Artigo em Inglês | VETINDEX | ID: biblio-1497805

RESUMO

Whitefly Bemisia tabaci (Gennadius) biotype B is the major pest of common bean (Phaseolus vulgaris L.) in Brazil and other countries. Host plant resistance is one of the cornerstones of Integrated Pest Management (IPM), and assessment of cultivars for insect resistance is fundamental to provide farmers options for pest control. This study evaluated common bean resistance to whitefly in the winter and rainy seasons in Jaboticabal, Brazil, and correlated the infestation with climatic factors. The plant part and development period of common bean that are more susceptible to whitefly infestation were also examined for potential use in IPM. Field experiments were carried out using 18 and 19 commercial cultivars in the winter and rainy seasons, respectively. Whitefly eggs, nymphs, and adults in the upper part and lower part of plants were sampled from 25 to 60 days after emergence (DAE). Cultivars IAC-Una and IAC-Eldorado had less oviposition and the former also showed lower adult infestation in the winter season. In the rainy season, cultivars IAPAR-81 and Guará had a smaller number of eggs, whereas IAC-Centauro was less infested by nymphs. The number of nymphs and adults was similar among cultivars in the winter and rainy seasons, respectively. The upper part of plants had a greater number of eggs and adults, while, the lower part harbored larger numbers of nymphs. Common bean was more susceptible to whitefly at 25-32 DAE in both seasons. These results add useful information to IPM of whitefly in common bean.


Assuntos
Controle de Pragas , Hemípteros , Phaseolus , Pragas da Agricultura
13.
Sci. agric. ; 76(5): 389-397, Sept.-Oct. 2019. tab, graf
Artigo em Inglês | VETINDEX | ID: vti-24485

RESUMO

Whitefly Bemisia tabaci (Gennadius) biotype B is the major pest of common bean (Phaseolus vulgaris L.) in Brazil and other countries. Host plant resistance is one of the cornerstones of Integrated Pest Management (IPM), and assessment of cultivars for insect resistance is fundamental to provide farmers options for pest control. This study evaluated common bean resistance to whitefly in the winter and rainy seasons in Jaboticabal, Brazil, and correlated the infestation with climatic factors. The plant part and development period of common bean that are more susceptible to whitefly infestation were also examined for potential use in IPM. Field experiments were carried out using 18 and 19 commercial cultivars in the winter and rainy seasons, respectively. Whitefly eggs, nymphs, and adults in the upper part and lower part of plants were sampled from 25 to 60 days after emergence (DAE). Cultivars IAC-Una and IAC-Eldorado had less oviposition and the former also showed lower adult infestation in the winter season. In the rainy season, cultivars IAPAR-81 and Guará had a smaller number of eggs, whereas IAC-Centauro was less infested by nymphs. The number of nymphs and adults was similar among cultivars in the winter and rainy seasons, respectively. The upper part of plants had a greater number of eggs and adults, while, the lower part harbored larger numbers of nymphs. Common bean was more susceptible to whitefly at 25-32 DAE in both seasons. These results add useful information to IPM of whitefly in common bean.(AU)


Assuntos
Phaseolus , Pragas da Agricultura , Controle de Pragas , Hemípteros
14.
Genet. mol. biol ; Genet. mol. biol;40(4): 813-823, Oct.-Dec. 2017. tab, graf
Artigo em Inglês | LILACS | ID: biblio-892451

RESUMO

Abstract The common bean is characterized by high sensitivity to drought and low productivity. Breeding for drought resistance in this species involves genes of different genetic groups. In this work, we used a SEA 5 x AND 277 cross to map quantitative trait loci associated with drought tolerance in order to assess the factors that determine the magnitude of drought response in common beans. A total of 438 polymorphic markers were used to genotype the F8 mapping population. Phenotyping was done in two greenhouses, one used to simulate drought and the other to simulate irrigated conditions. Fourteen traits associated with drought tolerance were measured to identify the quantitative trait loci (QTLs). The map was constructed with 331 markers that covered all 11 chromosomes and had a total length of 1515 cM. Twenty-two QTLs were discovered for chlorophyll, leaf and stem fresh biomass, leaf biomass dry weight, leaf temperature, number of pods per plant, number of seeds per plant, seed weight, days to flowering, dry pod weight and total yield under well-watered and drought (stress) conditions. All the QTLs detected under drought conditions showed positive effects of the SEA 5 allele. This study provides a better understanding of the genetic inheritance of drought tolerance in common bean.

15.
Genet Mol Biol ; 40(4): 813-823, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-29064511

RESUMO

The common bean is characterized by high sensitivity to drought and low productivity. Breeding for drought resistance in this species involves genes of different genetic groups. In this work, we used a SEA 5 x AND 277 cross to map quantitative trait loci associated with drought tolerance in order to assess the factors that determine the magnitude of drought response in common beans. A total of 438 polymorphic markers were used to genotype the F8 mapping population. Phenotyping was done in two greenhouses, one used to simulate drought and the other to simulate irrigated conditions. Fourteen traits associated with drought tolerance were measured to identify the quantitative trait loci (QTLs). The map was constructed with 331 markers that covered all 11 chromosomes and had a total length of 1515 cM. Twenty-two QTLs were discovered for chlorophyll, leaf and stem fresh biomass, leaf biomass dry weight, leaf temperature, number of pods per plant, number of seeds per plant, seed weight, days to flowering, dry pod weight and total yield under well-watered and drought (stress) conditions. All the QTLs detected under drought conditions showed positive effects of the SEA 5 allele. This study provides a better understanding of the genetic inheritance of drought tolerance in common bean.

16.
PLoS One ; 11(3): e0150506, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-26930078

RESUMO

The common bean (Phaseolus vulgaris L.) is the world's most important legume for human consumption. Anthracnose (ANT; Colletotrichum lindemuthianum) and angular leaf spot (ALS; Pseudocercospora griseola) are complex diseases that cause major yield losses in common bean. Depending on the cultivar and environmental conditions, anthracnose and angular leaf spot infections can reduce crop yield drastically. This study aimed to estimate linkage disequilibrium levels and identify quantitative resistance loci (QRL) controlling resistance to both ANT and ALS diseases of 180 accessions of common bean using genome-wide association analysis. A randomized complete block design with four replicates was performed for the ANT and ALS experiments, with four plants per genotype in each replicate. Association mapping analyses were performed for ANT and ALS using a mixed linear model approach implemented in TASSEL. A total of 17 and 11 significant statistically associations involving SSRs were detected for ANT and ALS resistance loci, respectively. Using SNPs, 21 and 17 significant statistically associations were obtained for ANT and angular ALS, respectively, providing more associations with this marker. The SSR-IAC167 and PvM95 markers, both located on chromosome Pv03, and the SNP scaffold00021_89379, were associated with both diseases. The other markers were distributed across the entire common bean genome, with chromosomes Pv03 and Pv08 showing the greatest number of loci associated with ANT resistance. The chromosome Pv04 was the most saturated one, with six markers associated with ALS resistance. The telomeric region of this chromosome showed four markers located between approximately 2.5 Mb and 4.4 Mb. Our results demonstrate the great potential of genome-wide association studies to identify QRLs related to ANT and ALS in common bean. The results indicate a quantitative and complex inheritance pattern for both diseases in common bean. Our findings will contribute to more effective screening of elite germplasm to find resistance alleles for marker-assisted selection in breeding programs.


Assuntos
Resistência à Doença/genética , Genoma de Planta/genética , Phaseolus/genética , Doenças das Plantas/genética , Ascomicetos/fisiologia , Mapeamento Cromossômico , Cromossomos de Plantas/genética , Colletotrichum/fisiologia , Frequência do Gene , Genes de Plantas/genética , Marcadores Genéticos/genética , Genótipo , Interações Hospedeiro-Patógeno , Padrões de Herança/genética , Desequilíbrio de Ligação , Repetições de Microssatélites/genética , Phaseolus/microbiologia , Doenças das Plantas/microbiologia , Polimorfismo de Nucleotídeo Único , Locos de Características Quantitativas/genética
17.
Genet Mol Biol ; 38(1): 67-78, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25983627

RESUMO

Because of the continuous introduction of germplasm from abroad, some collections have a high number of accessions, making it difficult to explore the genetic variability present in a germplasm bank for conservation and breeding purposes. Therefore, the aim of this study was to quantify and analyze the structure of genetic variability among 500 common bean accessions to construct a core collection. A total of 58 SSRs were used for this purpose. The polymorphism information content (PIC) in the 180 common bean accessions selected to compose the core collection ranged from 0.17 to 0.86, and the discriminatory power (DP) ranged from 0.21 to 0.90. The 500 accessions were clustered into 15 distinct groups and the 180 accessions into four distinct groups in the Structure analysis. According to analysis of molecular variance, the most divergent accessions comprised 97.2% of the observed genetic variability present within the base collection, confirming the efficiency of the selection criterion. The 180 selected accessions will be used for association mapping in future studies and could be potentially used by breeders to direct new crosses and generate elite cultivars that meet current and future global market needs.

18.
Sci. agric ; 72(1): 34-40, Jan.-Feb. 2015. tab
Artigo em Inglês | VETINDEX | ID: biblio-1497462

RESUMO

Value for Cultivation and Use (VCU) trials are undertaken when evaluating improved common bean (Phaseolus vulgaris L.) lines, and knowledge of agronomic and market-related traits and disease reaction is instrumental in making cultivar recommendations. This study evaluates the yield, cooking time, grain color and reaction to anthracnose (Colletotrichum lindemuthianum), Fusarium wilt (Fusarium oxysporum f. sp. phaseoli) and Curtobacterium wilt (Curtobacterium flaccumfaciens pv. flaccumfaciens) of 25 common bean genotypes derived from the main common bean breeding programs in Brazil. Seventeen VCU trials were carried out in the rainy season, dry season and winter season from 2009 to 2011 in the state of São Paulo. Analyses of grain color and cooking time were initiated 60 days after harvest, and disease reaction analyses were performed in the laboratory under controlled conditions. In terms of yield, no genotype superior to the controls was observed for any of the seasons under consideration. Grains from the dry season exhibited better color, while the rainy season led to the shortest cooking times. The following genotypes BRS Esteio, BRS Esplendor and IAC Imperador were resistant to anthracnose, Fusarium wilt and Curtobacterium wilt and, in general, genotypes with lighter-colored grains were more susceptible to anthracnose and Fusarium wilt.


Assuntos
Doenças das Plantas , Genótipo , Melhoramento Vegetal , Phaseolus/anatomia & histologia , Phaseolus/genética
19.
Sci. agric. ; 72(1): 34-40, Jan.-Feb. 2015. tab
Artigo em Inglês | VETINDEX | ID: vti-30098

RESUMO

Value for Cultivation and Use (VCU) trials are undertaken when evaluating improved common bean (Phaseolus vulgaris L.) lines, and knowledge of agronomic and market-related traits and disease reaction is instrumental in making cultivar recommendations. This study evaluates the yield, cooking time, grain color and reaction to anthracnose (Colletotrichum lindemuthianum), Fusarium wilt (Fusarium oxysporum f. sp. phaseoli) and Curtobacterium wilt (Curtobacterium flaccumfaciens pv. flaccumfaciens) of 25 common bean genotypes derived from the main common bean breeding programs in Brazil. Seventeen VCU trials were carried out in the rainy season, dry season and winter season from 2009 to 2011 in the state of São Paulo. Analyses of grain color and cooking time were initiated 60 days after harvest, and disease reaction analyses were performed in the laboratory under controlled conditions. In terms of yield, no genotype superior to the controls was observed for any of the seasons under consideration. Grains from the dry season exhibited better color, while the rainy season led to the shortest cooking times. The following genotypes BRS Esteio, BRS Esplendor and IAC Imperador were resistant to anthracnose, Fusarium wilt and Curtobacterium wilt and, in general, genotypes with lighter-colored grains were more susceptible to anthracnose and Fusarium wilt.(AU)


Assuntos
Genótipo , Melhoramento Vegetal , Phaseolus/anatomia & histologia , Phaseolus/genética , Doenças das Plantas
20.
J Agric Food Chem ; 62(40): 9699-704, 2014 Oct 08.
Artigo em Inglês | MEDLINE | ID: mdl-25268033

RESUMO

Common bean (Phaseolus vulgaris) is present in the daily diet of various countries and, as for other legumes, has been investigated for its nutraceutical potential. Thus, 16 genotypes from different gene pools, representing seven types of seed coats and different responses to pathogens and pests, were selected to verify their isoflavone contents. The isoflavonoids daidzein and genistein and the flavonols kaempferol, myricetin, and quercetin were found. Grains of the black type showed the highest concentrations of isoflavonoids and were the only ones to exhibit daidzein. IAC Formoso, with high protein content and source of resistance to anthracnose, showed the greatest concentration of genistein, representing around 11% of the content present in soybean, as well as high levels of kaempferol. Arc 1, Raz 55, and IAC Una genotypes showed high content of coumestrol. The results suggest the use of IAC Formoso to increase the nutraceutical characteristics in common bean.


Assuntos
Flavonoides/análise , Phaseolus/química , Sementes/química , Brasil , Cor , Cumestrol/análise , Genótipo , Isoflavonas/análise , Quempferóis/análise , Phaseolus/genética
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