Changes in phosphorus mobilization and community assembly of bacterial and fungal communities in rice rhizosphere under phosphate deficiency.

Rhizosphere microorganisms are closely associated with phosphorus (P) uptake in plants and are considered potential agents to mitigate P shortage. However, the mechanisms of rhizospheric microbial community assembly under P deficiency have yet to be elucidated. In this study, bacterial and fungal communities in rice rhizosphere and their P mobilization potential under high (+P) and low (-P) concentrations of P were investigated. Bacterial and fungal community structures were significantly different between -P and +P treatments. And both bacterial and fungal P-mobilizing taxa were enriched in-P treatment; however, the proportion of P-mobilizing agents in the fungal community was markedly greater than that in the bacterial community. A culture experiment confirmed that microbial phosphate solubilizing capacity was significantly higher in -P treatment compared with that in +P treatment. -P treatment lowered bacterial diversity in rice rhizosphere but increased fungal diversity. Further analysis demonstrated that the contribution of deterministic processes in governing bacterial community assembly was strengthened under P deficiency but was largely weakened in shaping the fungal community. These results highlighted that enriching P-mobilizing microbes in the rhizosphere is a vital way for rice to cope with P deficiency, and that fungi contribute considerably to P mobilization in rice rhizosphere. Findings from the study provide novel insights into the assembly of the rhizosphere microbiome under P deficiency and this will facilitate the development of rhizosphere microbial regulation strategies to increase nutrient uptake in plants.

Linking chemical structure of dissolved organic carbon and microbial community composition with submergence-induced soil organic carbon mineralization.

Much research has been devoted to investigating how water-extractable organic carbon (DOC) concentration and microbial activity regulate soil organic carbon (SOC) mineralization when soils are saturated with water. However, the relationships of DOC chemical structure and microbial community composition with SOC mineralization, as well as the relative contributions of microbial decomposers and their substrates on the mineralization rate have rarely been examined. In a laboratory experiment, we incubated two typical cropland soils (an Entisol and a Mollisol) of China for 360 days under submerged and non-submerged conditions, and we evaluated the concentration and chemical structure of soil DOC, soil microbial metabolic potential and community composition by using total C/N analysis, solution-state 1H NMR, Biolog EcoPlates, and 16S rRNA amplicon sequencing, respectively. The results showed that submergence significantly increased DOC concentration (P < 0.01) and microbial activity (P < 0.001) and changed DOC chemical structure in the Entisol (P < 0.01). In the Mollisol, it significantly increased the rate (P < 0.01) and cumulative extent (P < 0.001) of SOC mineralization and DOC concentration (P < 0.01) as well as altering the composition of the microbial community (P < 0.001). Moreover, the SOC mineralization rate was better explained by microbial community composition (Entisol: SPC = -0.71, P < 0.001; Mollisol: SPC = 0.92, P < 0.001) than by DOC concentration (Entisol: SPC = 0.21, P > 0.05; Mollisol: SPC = 0.30, P < 0.05) or DOC chemical structure (Entisol: SPC = 0.12, P > 0.05; Mollisol: SPC = -0.45, P < 0.001). Our study revealed that the bacterial community composition had a close relationship to the rate of submergence-induced SOC mineralization in both soils, but only DOC concentration and chemical structure were effective predictors of mineralization rate in the low-pH Mollisol.

The influence of a year-round tillage and residue management model on soil N fractions in a wheat-maize cropping system in central China.

Tillage practice and residue management play important roles in N pool in soils. This study determined the impacts of tillage practice and residue management on crop yield. It also investigated the distribution, fractionation, and stratification of N at soil at depths ranging from 0 to 60 cm under wheat-maize cropping systems. Three treatments were established in 2009: no-tillage with straw removal for winter wheat and summer maize (NT), no-tillage with straw mulching for winter wheat and summer maize (NTS), no-tillage with straw mulching for summer maize and plow tillage with straw incorporation for winter wheat (NPTS). After 8 years, soil total nitrogen (TN) content in NTS was greater than in NT, but only in 0-10 cm layer. NPTS treatment increased TN content over NT and NTS in 10-20 cm layer by 18.0% and 13.9%, and by 16.8% and 18.1% in 20-30 cm layer, respectively. Particulate organic N, microbial biomass N and water-extractable organic N levels were the greatest in 0-10 cm layer under NTS treatment; and in 10-30 cm layer, the corresponding values were the highest under NPTS treatment. NPTS treatment could immobilize the mineral N in 10-30 cm layer, and reduced leaching losses into deeper soil layers (40-60 cm). Furthermore, total yield increased by 14.7% and 8.5% in NPTS treatment compared to NT and NTS treatments, respectively. These results indicate that NPTS is an effective and sustainable management practice, which will improve soil fertility, sustainable crop production, and environmental quality in low-productivity soils in central China.

Greenhouse gas emissions from synthetic nitrogen manufacture and fertilization for main upland crops in China.

BACKGROUND: A significant source of greenhouse gas (GHG) emissions comes from the manufacture of synthetic nitrogen (N) fertilizers consumed in crop production processes. And the application of synthetic N fertilizers is recognized as the most important factor contributing to direct N2O emissions from agricultural soils. Based on statistical data and relevant literature, the GHG emissions associated with synthetic N manufacture and fertilization for wheat and maize in different provinces and agricultural regions of China were quantitatively evaluated in the present study. RESULTS: During the 2015-2017 period, the average application rates of synthetic N for wheat and maize in upland fields of China were 222 and 197 kg ha-1, respectively. The total consumption of synthetic N on wheat and maize was 12.63 Mt year-1. At the national scale, the GHG emissions associated with the manufacture of synthetic N fertilizers were estimated to be 41.44 and 59.71 Mt CO2-eq year-1 for wheat and maize in China, respectively. And the direct N2O emissions derived from synthetic N fertilization were estimated to be 35.82 and 69.44 Gg N2O year-1 for wheat and maize, respectively. In the main wheat-cultivating regions of China, area-scaled GHG emissions were higher for Inner Mongolia, Jiangsu and Xinjiang provinces. And for maize, Gansu, Xinjiang, Yunnan, Shannxi and Jiangsu provinces had higher area-scaled GHG emissions. Higher yield-scaled GHG emissions for wheat and maize mainly occured in Yunnan and Gansu provinces. CONCLUSIONS: The manufacture and application of synthetic N fertilizers for wheat and maize in Chinese croplands is an important source of agricultural GHG emissions. The current study could provide a scientific basis for establishing an inventory of upland GHG emissions in China and developing appropriate mitigation strategies.

Influence of aspartic acid and lysine on the uptake of gold nanoparticles in rice.

The interactions between plants and nanomaterials (NMs) can shed light on the environmental consequences of nanotechnology. We used the major crop plant rice (Oryza sativa L.) to investigate the uptake of gold nanoparticles (GNPs) coated with either negatively or positively charged ligands, over a 5-day period, in the absence or presence of one of two amino acids, aspartic acid (Asp) or lysine (Lys), acting as components of rice root exudates. The presence of Asp or Lys influenced the uptake and distribution of GNPs in rice, which depended on the electrical interaction between the coated GNPs and each amino acid. When the electrical charge of the amino acid was the same as that of the surface ligand coated onto the GNPs, the GNPs could disperse well in nutrient solution, resulting in increased uptake of GNPs into rice tissue. The opposite was true where the charge on the surface ligand was different from that on the amino acid, resulting in agglomeration and reduced Au uptake into rice tissue. The behavior of GNPs in the hydroponic nutrient solution was monitored in terms of agglomeration, particle size distribution, and surface charge in the presence and absence of Asp or Lys, which depended strongly on the electrostatic interaction. Results from this study indicated that the species of root exudates must be taken into account in assessing the bioavailability of nanomaterials to plants.

Amendment damages the function of continuous flooding in decreasing Cd and Pb uptake by rice in acid paddy soil.

Combinations of remediation technologies are needed to solve the problem of soil contamination in paddy rice, due to multiple potential toxic elements (PTEs). Two potential mitigation methods, water management and in-situ remediation by soil amendment, have been widely used in treatment of PTE-polluted paddy soil. However, the interactive relationship between soil amendment and water management, and its influence on the accumulation of PTEs in rice are poorly understood. Greenhouse pot experiments were conducted to examine the effects of phosphate amendment on Cd and Pb availability in soil and their influence on Cd and Pb uptake into rice, on Fe and P availability in soil, and on the alteration of Fe amount and compartment on root surface among different water management strategies. Results indicated that Cd and Pb content in the shoot and grain were significantly affected by the different water management strategies in nonamended soils, and followed the order: wetting irrigation > conventional irrigation > continuous flooding. The application of phosphate amendment significantly decreased the variations of Cd and Pb absorption in shoot and grain of rice among different water treatments. The reasons may be attributed to the enhancement of P availability and the decrease of Fe availability in soil, and the decreased variations of Fe2+/Fe3+ content in root coating after the application of phosphate amendment. These results suggested that the simultaneous use of phosphate amendment and continuous flooding to immobilize Cd and Pb, especially in acid paddy soils, should be avoided.

Degradation of Tetracyclines in Pig Manure by Composting with Rice Straw.

A holistic approach was followed for utilizing tetracyclines (TCs)-contaminated pig manure, by composting this with rice straw in a greenhouse for CO2 fertilization and composted residue application. After composting, the composted residues can be applied to cropland as a supplemental source of synthetic fertilizers. The objective of this study was to determine the effect of pig manure-rice straw composting on the degradation of TCs in pig manure. The results showed that greenhouse composting significantly accelerated the degradation of TCs. Contents (150 mg·kg(-1)) of oxytetracycline (OTC), tetracycline (TC) and chlortetracycline (CTC) in the composting feedstock could be completely removed within 42 days for OTC and TC, and 14 days for CTC. However, in the control samples incubated at 25 °C in the dark, concentrations of OTC, TC and CTC only decreased 64.7%, 66.7% and 73.3%, respectively, after 49 days. The degradation rates of TCs in the composting feedstock were in the order of CTC > TC > OTC. During the composting process, CTC dissipated rapidly with the time required for 50% degradation (DT50) and 90% degradation (DT90) of 2.4 and 7.9 days, but OTC was more persistent with DT50 and DT90 values of 5.5 and 18.4 days. On the basis of the results obtained in this study, it could be concluded that pig manure-rice straw composting in a greenhouse can help to accelerate the degradation of TCs in pig manure and make composted residues safer for field application. This technology could be an acceptable practice for greenhouse farmers to utilize TCs-contaminated pig manure.

Bioorganic fertilizer enhances soil suppressive capacity against bacterial wilt of tomato.

Tomato bacterial wilt caused by Ralstonia solanacearum is one of the most destructive soil-borne diseases. Many strategies have been taken to improve soil suppressiveness against this destructive disease, but limited success has been achieved. In this study, a novel bioorganic fertilizer revealed a higher suppressive ability against bacterial wilt compared with several soil management methods in the field over four growing seasons from March 2011 to July 2013. The application of the bioorganic fertilizer significantly (P<0.05) reduced disease incidence of tomato and increased fruit yields in four independent trials. The association among the level of disease incidence, soil physicochemical and biological properties was investigated. The soil treated with the bioorganic fertilizer increased soil pH value, electric conductivity, organic carbon, NH4+-N, NO3--N and available K content, microbial activities and microbial biomass carbon content, which were positively related with soil suppressiveness. Bacterial and actinomycete populations assessed using classical plate counts were highest, whereas R. solanacearum and fungal populations were lowest in soil applied with the bioorganic fertilizer. Microbial community diversity and richness were assessed using denaturing gel gradient electrophoresis profile analysis. The soil treated with the bioorganic fertilizer exhibited higher bacterial community diversity but lower fungal community diversity. Redundancy analysis showed that bacterial community diversity and richness negatively related with bacterial wilt suppressiveness, while fungal community richness positively correlated with R. solanacearum population. We concluded that the alteration of soil physicochemical and biological properties in soil treated with the bioorganic fertilizer induced the soil suppressiveness against tomato bacterial wilt.

Magnesium availability regulates the development of root hairs in Arabidopsis thaliana (L.) Heynh.

Root hairs are reported to be plastic in response to nutrient supply, but relatively little is known about their development in response to magnesium (Mg) availability. Here, we showed that development of root hairs of Arabidopsis decreased progressively with increasing Mg supply, which was related to the initiation of new trichoblast files and likelihood of trichoblasts to form hairs. Tip-focused reactive oxygen species (ROS) and cytosolic Ca(2+) concentrations [(Ca(2+) )c] during elongation of root hairs were enhanced under low Mg but decreased under high Mg. Under low Mg, application of diphenylene iodonium (DPI) or BAPTA [1,2-bis(o-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid] blocked the enhanced development of root hairs and the opposite was true when the plants under high Mg were treated with phenazine methosulphate (PMS), methyl viologen (MV) or CaCl2 . Furthermore, Mg availability did not alter root hair growth in rhd2-1 mutant that contains lower levels of ROS and cytosolic [Ca(2+) ]c. Transcriptome data and qPCR results revealed a greater fraction of morphogenetic H-genes, and cell wall organization genes were up-regulated by low Mg but down-regulated by high Mg. Our data suggest a profound effect of Mg supply on the development of root hairs in Arabidopsis, through the characterized Ca(2+) and ROS signals that modulate the elongation of root hairs and the expression of root-hair morphogenetic genes.

Cross-talk between nitric oxide and Ca (2+) in elevated CO 2-induced lateral root formation.

This study demonstrates a potential signaling pathway of CO 2-dependent stimulation in lateral root (LR) formation. Elevated CO 2 increases production of nitric oxide (NO), which subsequently stimulates the generation of cytosolic Ca (2+) concentration by activating plasma membrane and/or intracellular Ca (2+)-permeable channels. Meanwhile, nitric oxide synthase (NOS), as one of the main NO source, requires Ca (2+) and CaM as cofactors. This complex interaction involves transduction cascades of multiple signals that lead to the LR formation and development. Finally, this review highlights the the role of Ca (2+) in the process that elevated CO 2 enhances the development of LRs through increased NO level.

Nitric oxide enhances development of lateral roots in tomato (Solanum lycopersicum L.) under elevated carbon dioxide.

Elevated carbon dioxide (CO2) has been shown to enhance the growth and development of plants, especially of roots. Amongst them, lateral roots play an important role in nutrient uptake, and thus alleviate the nutrient limitation to plant growth under elevated CO2. This paper examined the mechanism underlying CO2 elevation-induced lateral root formation in tomato. The endogenous nitric oxide (NO) in roots was detected by the specific probe 4-amino-5-methylamino-2',7'-difluorofluorescein diacetate (DAF-FM DA). We suggest that CO2 elevation-induced NO accumulation was important for lateral root formation. Elevated CO2 significantly increased the activity of nitric oxide synthase in roots, but not nitrate reductase activity. Moreover, the pharmacological evidence showed that nitric oxide synthase rather than nitrate reductase was responsible for CO2 elevation-induced NO accumulation. Elevated CO2 enhanced the activity of nitric oxide synthase and promoted production of NO, which was involved in lateral root formation in tomato under elevated CO2.

Effect of elevated CO2 on phosphorus nutrition of phosphate-deficient Arabidopsis thaliana (L.) Heynh under different nitrogen forms.

Phosphorus (P) nutrition is always a key issue regarding plants responses to elevated CO(2). Yet it is unclear of how elevated CO(2) affects P uptake under different nitrogen (N) forms. This study investigated the influence of elevated CO(2) (800 µl l(-1)) on P uptake and utilization by Arabidopsis grown in pH-buffered phosphate (P)-deficient (0.5 µM) hydroponic culture supplying with 2mM nitrate (NO(3)(-)) or ammonium (NH(4)(+)). After 7 d treatment, elevated CO(2) enhanced the biomass production of both NO(3)(-)- and NH(4) (+)-fed plants but decreased the P amount absorbed per weight of roots and the P concentration in the shoots of plants supplied with NH(4)(+). In comparison, elevated CO(2) increased the amount of P absorbed per weight of roots, as well as the P concentration in plants and alleviated P deficiency-induced symptoms of plants supplied with NO(3)(-). Elevated CO(2) also increased the root/shoot ratio, total root surface area, and acid phosphatase activity, and enhanced the expression of genes or transcriptional factors involving in P uptake, allocation and remobilization in P deficient plants. Furthermore, elevated CO(2) increased the nitric oxide (NO) level in roots of NO(3)(-)-fed plants but decreased it in NH(4)(+)-fed plants. NO scavenger 2-(4-carboxyphenyl)-4,4,5,5-tetramethylimidazoline-1-oxyl-3-oxide (cPTIO) inhibited plant P acquisition by roots under elevated CO(2). Considering all of these findings, this study concluded that a combination of elevated CO(2) and NO(3)(-) nutrition can induce a set of plant adaptive strategies to improve P status from P-deficient soluble sources and that NO may be a signalling molecule that controls these processes.

[Effects of elevated CO2 concentration on the quality of agricultural products: a review].

The increasing concentration of atmospheric CO2 and the nutritional quality of human diets are the two important issues we are facing. At present, the atmospheric CO2 concentration is about 380 micromol mol(-1), and to be reached 550 micromol mol(-1) by 2050. A great deal of researches indicated that the quality of agricultural products is not only determined by inherited genes, but also affected by the crop growth environmental conditions. This paper summarized the common methods adopted at home and abroad for studying the effects of CO2 enrichment on the quality of agricultural products, and reviewed the research advances in evaluating the effects of elevated CO2 on the quality of rice, wheat, soybean, and vegetables. Many experimental results showed that elevated CO2 concentration causes a decrease of protein content in the grains of staple food crops and an overall decreasing trend of trace elements contents in the crops, but improves the quality of vegetable products to some extent. Some issues and future directions regarding the effects of elevated CO2 concentration on the quality of agricultural products were also discussed, based on the present status of related researches.