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1.
J Comput Chem ; 2024 Jul 06.
Artigo em Inglês | MEDLINE | ID: mdl-38970347

RESUMO

In this study, nanocomposites of g-C3N4/MN4 (where M is Mn, Fe and Co) have been designed using advanced density functional theory (DFT) calculations. A comprehensive analysis was conducted on the geometry, electronic, optical properties, work function, charge transfer interaction and adhesion energy of the g-C3N4/MN4 heterostructures and concluded that g-C3N4/FeN4 and g-C3N4/CoN4 heterojunctions exhibit higher photocatalytic performance than individual units. The better photocatalytic activity can be attributed mainly by two facts; (i) the visible light absorption of both g-C3N4/FeN4 and g-C3N4/CoN4 interfaces are higher compared to its isolated analogs and (ii) a significant enhancement of band gap energy in g-C3N4/FeN4 and g-C3N4/CoN4 heterostructures limited the electron-hole recombination significantly. The potential of the g-C3N4/MN4 heterojunctions as a photocatalyst for the water splitting reaction was assessed by examining its band alignment for water splitting reaction. Importantly, while the electronic and magnetic properties of MN4 systems were studied, this is the first example of inclusion of MN4 on graphene-based material (g-C3N4) for studying the photocatalytic activity. The state of the art DFT calculations emphasis that g-C3N4/FeN4 and g-C3N4/CoN4 heterojunctions are half metallic photocatalysts, which is limited till date.

2.
Phys Chem Chem Phys ; 22(4): 2142-2156, 2020 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-31912070

RESUMO

There are several important phenomena in chemistry, biology, and physics where molecules (or parts of a molecule) having charges of the same sign come closer together and become stable. DNA condensation, RNA folding, colloid-colloid interactions are some of the examples of this kind. In the current work, we have investigated how ß-lactoglobulin, a protein found in milk, in spite of carrying +13 charge, favors the homodimer formation in the presence of salt. We have focussed on calculating the protein-protein binding free energy in the presence of salt and identifying the thermodynamic and microscopic mechanism of the process. Estimation of binding free energy of this salt-dependent process is done by combining molecular dynamics simulation with statistical mechanical theory of three-dimensional reference interaction site model (3D-RISM). Binding free energy is evaluated from the chemical potential of the solutes as opposed to potential of mean force calculation, which gives only a constrained free energy. Our calculated values semi-quantitatively match with the experimental results. By examining the different components of binding free energy, we have found that the role of salt ions (especially of Cl-) is to shift the equilibrium towards the dimer. Non-polar (Lennard-Jones) interactions between the monomers is also favorable to the binding free energy. However, water slightly disfavors the dimer formation. For the microscopic mechanism, heterogeneous of both Na+ and Cl- near the charged residues at the binding interface and change of this charge distribution on dimer formation contribute to the stability. A fine-tuning of enthalpic and entropic effects of salt ions is found to operate at different salt concentrations. Both thermodynamic and microscopic mechanism of dimer formation gives detailed insight into the complex electrostatics of charged protein-protein binding.


Assuntos
Lactoglobulinas/química , Modelos Moleculares , Simulação de Dinâmica Molecular , Sais/química , Dimerização , Lactoglobulinas/metabolismo , Ligação Proteica , Estrutura Terciária de Proteína
3.
Acc Chem Res ; 47(5): 1604-12, 2014 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-24758397

RESUMO

The two-photon absorption (TPA) process is the simplest and hence the most studied nonlinear optical phenomenon, and various aspects of this process have been explored in the past few decades, experimentally as well as theoretically. Previous investigations have shown that the two-photon (TP) activity of a molecular system can be tuned, and at present, performance-tailored TP active materials are easy to develop by monitoring factors such as length of conjugation, dimensionality of charge-transfer network, strength of donor-acceptor groups, polarity of solvents, self-aggregation, H-bonding, and micellar encapsulation to mention but a few. One of the most intriguing phenomena affecting the TP activity of a molecule is channel interference. The phrase "channel interference" implies that if the TP transition from one electronic state to another involves more than one optical pathway or channel, characterized by the corresponding transition dipole moment (TDM) vectors, the channels may interfere with each other depending upon the angles between the TDM vectors and hence can either increase (constructive interference) or decrease (destructive interference) the overall TP activity of a system to a significant extent. This phenomenon was first pointed out by Cronstrand, Luo, and Ågren [Chem. Phys. Lett. 2002, 352, 262-269] in two-dimensional systems (i.e., only involving two components of the transition moment vectors). For three-dimensional molecules, an extended version of this idea was required. In order to fill this gap, we developed a generalized model for describing and exploring channel interference, valid for systems of any dimensionality. We have in particular applied it to through-bond (TB) and through-space (TS) charge-transfer systems both in gas phase and in solvents with different polarities. In this Account, we will, in addition to briefly describing the concept of channel interference, discuss two key findings of our recent work: (1) how to control the channel interference by chemical means, and (2) the role of channel interference in the anomalous solvent dependence of certain TP chromophores. For example, we will show that simple structurally induced changes in certain dihedral angles of the well-known betaine dye (TB type) will help fine-tune the constructive channel interference and hence increase the overall TP activity of molecules with this general TP channel structure. Another intriguing result we will discuss is observed for a tweezer-trinitrofluorinone complex (TS type) where, on moving from polar to essentially nonpolar solvents, the nature of the channel interference switches from destructive to constructive, leading to a net abnormal solvent dependence of the TP activity of the system. The present Account highlights the usefulness of the channel interference effect and establishes it as a new and unique way of controlling the TP transition probability in different types of three-dimensional molecules.

4.
Chemphyschem ; 15(9): 1747-51, 2014 Jun 23.
Artigo em Inglês | MEDLINE | ID: mdl-24764056

RESUMO

The generation of spin-based multi-qubit entangled states in the presence of an electric field is one of the most challenging tasks in current quantum-computing research. Such examples are still elusive. By using non-equilibrium Green's function-based quantum-transport calculations in combination with non-collinear spin density functional theory, we report that an eight-spin-qubit entangled state can be generated with the high-spin state of a dinuclear Fe(II) complex when the system is placed in a molecular break junction. The possible gate operation scheme, gating time, and decoherence issues have been carefully addressed. Furthermore, our calculations reveal that the preservation of the high spin state of this complex is possible if the experimentalists keep the electric-field strength below 0.78 V nm(-1). In brief, the present study offers a unique way to realize the first example of a multi-qubit entangled state by electrical means only.

5.
Phys Chem Chem Phys ; 16(17): 8030-5, 2014 May 07.
Artigo em Inglês | MEDLINE | ID: mdl-24647899

RESUMO

In the present work, we report the mechanism of a very large increase in the two-photon (TP) activity of squaraine based molecules upon changing the substituents. The replacement of a specific fused ring by ethylene or ethyne moieties enhances the TP transition strength of these molecules up to the order of 10(13) au (∼10(10) GM), both in the gas phase as well as in dichloromethane solvent. Our calculations decisively establish that the reason for this large enhancement in the TP activity of the studied systems is the severe decrease in the corresponding detuning energies. We explain this fact using damped response theory calculations and provide a novel design strategy to control the detuning energy of such molecules. The results are benchmarked against the available experimental findings.

6.
Phys Chem Chem Phys ; 15(40): 17570-6, 2013 Oct 28.
Artigo em Inglês | MEDLINE | ID: mdl-24036953

RESUMO

We study the effect of donor-acceptor orientation on solvent-dependent three-photon transition probabilities (δ(3PA)) of representative through-space charge-transfer (TSCT) systems, namely, doubly positively charged [2,2]-paracyclophane derivatives. Our cubic response calculations reveal that the value of δ(3PA) may be as high as 10(6) a.u., which can further be increased by a specific orientation of the donor-acceptor moieties. To explain the origin of the solvent cum orientation dependency of δ(3PA), we have calculated different three-photon tensor components using a two-state model, noting that only a few tensor elements contribute significantly to the overall δ(3PA) value. We show that this dependence is due to the large dipole moment difference between the ground and excited states of the systems. The dominance of a few tensor elements indicates a synergistic involvement of π-conjugation and TSCT in the large δ(3PA) of these systems.

7.
J Phys Chem A ; 116(45): 11034-40, 2012 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-23092388

RESUMO

In this work, using the quadratic response theory and two-state model approach, we have explained the origin of high two-photon activity and the corresponding solvent dependence of 4,4'-dimethyl-amino-nitro-stilbene (DANS) molecule. For this purpose, we have made two structural modifications in the DANS molecule (1) at the donor-acceptor part and (2) at the unsaturated bridge between the two rings and calculated the one- and two-photon (OP and TP) absorption parameters of all the systems in gas phase and in three different solvents, viz., MeCN, THF, and toluene. We found that the removal of donor-acceptor groups from the original DANS molecule vanishes the transition moment between the ground and excited states and also the corresponding dipole moment difference, and the saturation of the π-conjugation bridge between the two rings keeping the donor-acceptor groups intact causes a large decrease in the ground to excited state transition moment. These changes, in turn, decrease the overall TP activity of the molecules as compared to DANS. On the basis of our analysis, we have concluded that neither the donor-acceptor pair nor the π-conjugation bridge between the two, rather their cooperative involvement leads to a large overlap between the ground and virtual and also the virtual and charge-transfer states, which are eventually responsible for the very large TP activity of DANS.

8.
J Phys Chem A ; 116(30): 8067-73, 2012 Aug 02.
Artigo em Inglês | MEDLINE | ID: mdl-22779774

RESUMO

Herein, we show that the two-photon (TP) transition probability (δTP) of o-betaine system will reach its maximum value at a twist angle around 65°. However, the potential energy scan with respect to the twist angle between its two rings indicates that the molecule in its ground state is quite unstable at this twist angle. Out of the different possibilities, the one having a single methyl group at the ortho position of the pyridinium ring is found to attain the optimum twist angle between the two rings, and interestingly, this particular substituted o-betaine has larger δTP value than any other substituted or pristine o-betaine. The twist angle dependent variation of δTP has been explained by employing the generalized-few-state-model formula for 3D molecules. The results clearly reveal that the magnitude of ground to excited state and excited state dipole moment vectors as well as the angle between them are strongly in favor of maximizing the overall δTP values at the optimum twist angle. The constructive interference between the optical channels at the optimum twist angle also plays an important role to achieve the maximum δTP value. Furthermore, to give proper judgment on our findings, we have also performed solvent phase calculations on all the model systems in nonpolar solvents, namely, cyclohexane and n-hexane, and the results are quite consistent with the gas phase findings. The present study will definitely offer a new way to synthesize novel two-photon active material based on o-betaine.

9.
Phys Chem Chem Phys ; 14(26): 9439-43, 2012 Jul 14.
Artigo em Inglês | MEDLINE | ID: mdl-22648003

RESUMO

Herein, we predict that graphene nanoribbons will be nonplanar under the influence of a critical perpendicular field. Our investigation demonstrates that the perpendicular field induces mixing of σ and π orbitals in graphene nanoribbons through the second order Stark effect which eventually modulates the electron-nuclear interaction strongly in favor of a bent structure.

10.
J Chem Phys ; 136(9): 094904, 2012 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-22401470

RESUMO

Ab initio relativistic density functional theoretical calculations have been carried out on π-conjugated oligomers of increasing length with S, Se, and Te as heteroatoms. The band gap of the corresponding polymers has been obtained by plotting lowest unoccupied molecular orbital (LUMO)-highest occupied molecular orbital (HOMO)gap against the reciprocal of the number of monomer units (1/N) and extrapolating the curve to 1/N = 0. With B3LYP functional, we predict that role of relativistic correction terms is not very significant in the determination of final band gap of thiophene, selenophene, and tellurophene polymer. The origin of this observation is provided through the density of states (DOS) analysis which manifests that DOS contribution across the Fermi level of these polymers is mostly governed by C atoms and as a consequence relativistic correction terms due to heavy heteroatom remain insignificant to the band gap modification. We also inspected the role of inter-chain interaction in determining the net LUMO-HOMO gap of π-stacked double chain oligomers of increasing length. We have found that due to the exciton splitting in the stacked configurations, the LUMO-HOMO gap decreases steadily. Furthermore, we have noticed that dispersion force has important role in the reduction of the LUMO-HOMO gap of the oligomers studied.

11.
Phys Chem Chem Phys ; 14(3): 1156-65, 2012 Jan 21.
Artigo em Inglês | MEDLINE | ID: mdl-22127437

RESUMO

For the first time, we report the effect of interference between different optical channels on the two-photon absorption (TPA) process in three dimensions. We have employed response theory as well as a sum-over-states (SOS) approach involving few intermediate states to calculate the TPA parameters like transition probabilities (δ(TP)) and TPA tensor elements. In order to use the limited SOS approach, we have derived a new formula for a generalized few-state-model (GFSM) in three dimensions. Due to the presence of additional terms related to the angle between different transition moment vectors, the channel interference associated with the TPA process in 3D is significantly different and much more complicated than that in 1D and 2D cases. The entire study has been carried out on the two simplest Reichardt's dyes, namely 2- and 4-(pyridinium-1-yl)-phenolate (ortho- and para-betain) in gas phase, THF, CH(3)CN and water solvents. We have meticulously inspected the effect of the additional angle related terms on the overall TPA transition probabilities of the two 3D isomeric molecules studied and found that the interfering terms involved in the δ(TP) expression contribute both constructively and destructively as well to the overall δ(TP) value. Moreover, the interfering term has a more conspicuous role in determining the net δ(TP) associated with charge transfer transition in comparison to that of π-π* transition of the studied systems. Interestingly, our model calculations suggest that, for o- and p-betain, the quenching of destructive interference associated with a particular two-photon process can be done with high polarity solvents while the enhancement of constructive interference will be achieved in solvents having relatively small polarity. All the one- and two-photon parameters are evaluated using a range separated CAMB3LYP functional.

12.
J Phys Chem Lett ; 3(8): 961-6, 2012 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-26286556

RESUMO

In the Letter, we address the question as to why larger two-photon absorption cross sections are observed in nonpolar than in polar solvents for through-space charge-transfer (TSCT) systems such as [2,2]-paracyclophane derivatives. In order to answer this question, we have performed ab initio calculations on two well-known TSCT systems, namely, a [2.2]-paracyclophane derivative and a molecular tweezer-trinitrofluorinone complex, and found that the two-photon transition probability values of these systems decreases with increasing solvent polarity. To rationalize this result, we have analyzed the role of different optical channels associated with the two-photon process and noticed that, in TSCTs, the interference between the optical channels is mostly destructive and that its magnitude increases with increasing solvent polarity. Moreover, it is also found that a destructive interference may sometimes even become a constructive one in a nonpolar solvent, making the two-photon activity of TSCTs in polar solvents less than that in nonpolar solvents.

13.
Phys Rev Lett ; 109(25): 257204, 2012 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-23368493

RESUMO

Herein, we predict that a 1D chain of Ti@C(32) - C(2) - Ti@C(32) (TEMF) will act as a spin switch in the presence of an electric field. The spin resolved density of states analyses reveal that, surprisingly, both the low- and high-spin states of TEMF are half-metal; however, the metallic density of states comes from the opposite spin channels of the two spin states. More remarkably, it is found that the electric field driven spin crossover between the low and high state in TEMF is achievable at field strength 1.04 V/nm, which eventually leads to the realization of the first ever electrically operated spin switch device.

14.
Phys Chem Chem Phys ; 13(20): 9285-92, 2011 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-21475766

RESUMO

In the present work, we have studied the two-photon absorption (TPA) properties of some selective molecules containing triarylborane and 1-naphthylphenylamine as the acceptor and donor moiety, respectively. The calculations are performed by using the state-of-the-art linear and quadratic response theory in the framework of the time dependent density functional theoretical method. The TPA parameters are calculated with CAMB3LYP functional and the cc-pVDZ basis set. The one-photon results indicate that both the electronic transitions (S(0)-S(1) and S(0)-S(2)) are associated with the charge transfer interaction between the donor and acceptor moieties along with the reorganization of the π-electron density. All these chromophores are found to have very strong two-photon active modes. In order to find out the origin of large TP transition probability of these molecules, we have performed two-state model (TSM) and sum-over-states (SOS) calculations. We have found that the TSM failed to reproduce the correct trend of the TP transition probability of the molecules obtained from the response theory, while SOS is quite successful in doing so. The whole study indicates that the transition moments between the excited states play a pivotal role in controlling the TP transition probabilities of these molecules. The role of solvent in the TP transition probability of these molecules has meticulously been scrutinized within the polarized continuum model (PCM). Further more, we have benchmarked our theoretical findings by calculating the TPA cross-section of a boron and nitrogen containing a charge transfer molecule for which the experimental result is available and we found that our theoretical result is in good agreement with the experimental one which definitely demonstrates the potential of all these light-emitting diode molecules as TP active materials too.

15.
J Phys Chem A ; 115(12): 2607-14, 2011 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-21375281

RESUMO

In the present work, we have critically examined the origin of strong two-photon transition probability of a donor-acceptor substituted bisanthene molecule that imitates a small piece of edge passivated (4, 4) graphene nanoribbon. In our calculations, we have considered -OMe, and -NH(2) as donors and -NO(2) as an acceptor. The one- and two-photon absorption parameters are evaluated using state-of-the-art linear and quadratic response theory, respectively, and all these calculations are carried out within the framework of time dependent density functional theory. To give a proper judgment on our findings, we have used the long-range corrected CAMB3LYP functional for all of the time dependent calculations. The present investigation reveals that the bisanthene molecule with three pairs of donor/acceptor moiety has a lower two-photon transition probability than that of a suitably designed bisanthene with only a single pair of donor/acceptor moiety. This in silico observation is consistent for all of the donor/acceptor moieties chosen in the present work. A comprehensive analysis at the two state model level of theory clearly offers us a verdict that by placing the donor/acceptor moiety in a suitable position of bisanthene, we can create a significant asymmetry in the electron density in the first excited state, which eventually leads to a significant difference in the ground and excited state dipole moment and is attributed to the higher two-photon transition probability of a particular bisanthene with a single pair of donor/acceptor moiety than bisanthene with three pairs of donor/acceptor.

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