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2.
Sci Rep ; 5: 8397, 2015 Feb 23.
Artigo em Inglês | MEDLINE | ID: mdl-25703686

RESUMO

Asia differs substantially among and within its regions populated by diverse ethnic groups, which maintain their own respective cultures and dietary habits. To address the diversity in their gut microbiota, we characterized the bacterial community in fecal samples obtained from 303 school-age children living in urban or rural regions in five countries spanning temperate and tropical areas of Asia. The microbiota profiled for the 303 subjects were classified into two enterotype-like clusters, each driven by Prevotella (P-type) or Bifidobacterium/Bacteroides (BB-type), respectively. Majority in China, Japan and Taiwan harbored BB-type, whereas those from Indonesia and Khon Kaen in Thailand mainly harbored P-type. The P-type microbiota was characterized by a more conserved bacterial community sharing a greater number of type-specific phylotypes. Predictive metagenomics suggests higher and lower activity of carbohydrate digestion and bile acid biosynthesis, respectively, in P-type subjects, reflecting their high intake of diets rich in resistant starch. Random-forest analysis classified their fecal species community as mirroring location of resident country, suggesting eco-geographical factors shaping gut microbiota. In particular, children living in Japan harbored a less diversified microbiota with high abundance of Bifidobacterium and less number of potentially pathogenic bacteria, which may reflect their living environment and unique diet.


Assuntos
Bacteroides/isolamento & purificação , Bifidobacterium/isolamento & purificação , Biodiversidade , Trato Gastrointestinal/microbiologia , Prevotella/isolamento & purificação , Ásia , Bacteroides/classificação , Bacteroides/genética , Bifidobacterium/classificação , Bifidobacterium/genética , Ácidos e Sais Biliares/biossíntese , Metabolismo dos Carboidratos , Criança , Análise por Conglomerados , DNA Bacteriano/análise , Fezes/microbiologia , Humanos , Metagenoma , Filogenia , Prevotella/classificação , Prevotella/genética , Análise de Componente Principal , Reação em Cadeia da Polimerase em Tempo Real , Análise de Sequência de DNA
3.
Int J Exp Pathol ; 91(1): 34-43, 2010 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-19878356

RESUMO

The differential diagnosis of soft tissue tumours poses a considerable challenge for pathologists, especially adipocytic tumours, as these may show considerable overlap in clinical presentation and morphological features with many other mesenchymal neoplasms. Hence, a specific and reliable marker that identifies adipocytic differentiation is much sought. We investigated the immunohistochemical expression of PIM-1 kinase in 35 samples of soft tissue tumours using tissue microarray technology and 49 full sections of adipocytic (n = 26) and non-adipocytic tumours (n = 23). Benign and malignant adipocytic tumours showed strong expression of PIM-1 while the non-adipocytic tumours were either negative or showed only weak staining for the protein. In myxoid liposarcomas, PIM-1 showed a distinct, unique vacuolar staining pattern, clearly outlining fine cytoplasmic lipid vacuoles. By contrast, non-adipocytic myxoid tumours (myxoma, chordoma and myxoid chondrosarcoma) did not show this vacuolar pattern of PIM-1 staining, although vacuolated cells were present on H&E. This differential expression was confirmed at a gene expression level in selected cases. Our results indicate that the expression of PIM-1 in adipose tissue may be a useful marker of adipocytic differentiation, in particular if the staining is both of high intensity and present in a unique, vacuolar pattern.


Assuntos
Adipócitos/enzimologia , Biomarcadores Tumorais/análise , Neoplasias Lipomatosas/enzimologia , Proteínas Proto-Oncogênicas c-pim-1/análise , Sarcoma/enzimologia , Adipócitos/patologia , Biomarcadores Tumorais/genética , Diferenciação Celular , Diagnóstico Diferencial , Regulação Enzimológica da Expressão Gênica , Regulação Neoplásica da Expressão Gênica , Humanos , Imuno-Histoquímica , Neoplasias Lipomatosas/genética , Neoplasias Lipomatosas/patologia , Reação em Cadeia da Polimerase , Valor Preditivo dos Testes , Proteínas Proto-Oncogênicas c-pim-1/genética , RNA Mensageiro/análise , Sarcoma/genética , Sarcoma/patologia , Análise Serial de Tecidos , Vacúolos/enzimologia
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