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J Biomol Struct Dyn ; 20(5): 693-702, 2003 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-12643772

RESUMO

The telomeric DNA oligomers, d(TTAGGG)(n), where n=1, 2, 4, could self-associate into the multi-stranded structures in appropriate condition, exhibited different CD spectra. The presense of Na(+) was more advantage to facilitate the formation of anti-parallel conformation, but the presense of K(+) enhanced their thermal stability. Spectroscopic analysis of 3, 3'-diethyloxadicarbocyanine (DODC) showed the formation of hairpin quadruplex structures for d(TTAGGG)(2) and d(TTAGGG)(4), but d(TTAGGG) could not. The four-stranded tetraplexes and branched nanowire formed in the presense of K(+) or Na(+) alone were observed by atomic force microscopy (AFM). The ability of d(TTAGGG)(n) to self-assemble into four-stranded tetraplexes and nanowires depends strongly on the number of repeating units and ionic environment. A model to explain how these structures formed is proposed.


Assuntos
DNA/química , Potássio/farmacologia , Sódio/farmacologia , Telômero/química , Cátions Monovalentes/química , Dicroísmo Circular , Quadruplex G , Microscopia de Força Atômica , Modelos Químicos , Oligonucleotídeos/química , Sequências de Repetição em Tandem
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