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1.
Sports (Basel) ; 12(3)2024 Mar 06.
Artigo em Inglês | MEDLINE | ID: mdl-38535737

RESUMO

Kicking strikes are fundamental in combat sports such as Taekwondo, karate, kickboxing, Muay Thai, and mixed martial arts. This review aimed to explore the measurement methods, kinematics such as velocities, kinetics such as impact force, determinants, and injury potential of kicking strikes in combat sports. Searches of Academic Search Premier, The Allied and Complementary Medicine Database, CINAHL Plus, MEDLINE, SPORTDiscus, Scopus, and Web of Science databases were conducted for studies that measured kicking velocity and impact force. A total of 88 studies were included in the review. Studies most frequently involved only male participants (49%) aged between 18 and 30 years of age (68%). Studies measuring velocity predominantly implemented camera-based motion capture systems (96%), whereas studies measuring impact force displayed considerable heterogeneity in their measurement methods. Five primary strikes were identified for which foot velocities ranged from 5.2 to 18.3 m/s and mean impact force ranged from 122.6 to 9015 N. Among the techniques analysed, the roundhouse kick exhibited the highest kicking velocity at 18.3 m/s, whilst the side kick produced the highest impact force at 9015 N. Diverse investigation methodologies contributed to a wide value range for kicking velocities and impact forces being reported, making direct comparisons difficult. Kicking strikes can be categorised into throw-style or push-style kicks, which modulate impact through different mechanisms. Kicking velocity and impact force are determined by several factors, including technical proficiency, lower body strength and flexibility, effective mass, and target factors. The impact force generated by kicking strikes is sufficient to cause injury, including fracture. Protective equipment can partially attenuate these forces, although more research is required in this area. Athletes and coaches are advised to carefully consider the properties and potential limitations of measurement devices used to assess impact force.

2.
Pain ; 164(3): 469-484, 2023 03 01.
Artigo em Inglês | MEDLINE | ID: mdl-36265391

RESUMO

ABSTRACT: Blinding is challenging in randomised controlled trials of physical, psychological, and self-management therapies for pain, mainly because of their complex and participatory nature. To develop standards for the design, implementation, and reporting of control interventions in efficacy and mechanistic trials, a systematic overview of currently used sham interventions and other blinding methods was required. Twelve databases were searched for placebo or sham-controlled randomised clinical trials of physical, psychological, and self-management treatments in a clinical pain population. Screening and data extraction were performed in duplicate, and trial features, description of control methods, and their similarity to the active intervention under investigation were extracted (protocol registration ID: CRD42020206590). The review included 198 unique control interventions, published between 2008 and December 2021. Most trials studied people with chronic pain, and more than half were manual therapy trials. The described control interventions ranged from clearly modelled based on the active treatment to largely dissimilar control interventions. Similarity between control and active interventions was more frequent for certain aspects (eg, duration and frequency of treatments) than others (eg, physical treatment procedures and patient sensory experiences). We also provide an overview of additional, potentially useful methods to enhance blinding, as well as the reporting of processes involved in developing control interventions. A comprehensive picture of prevalent blinding methods is provided, including a detailed assessment of the resemblance between active and control interventions. These findings can inform future developments of control interventions in efficacy and mechanistic trials and best-practice recommendations.


Assuntos
Dor Crônica , Autogestão , Humanos , Dor Crônica/terapia
3.
Pain ; 164(3): 509-533, 2023 03 01.
Artigo em Inglês | MEDLINE | ID: mdl-36271798

RESUMO

ABSTRACT: Sham interventions in randomized clinical trials (RCTs) of physical, psychological, and self-management (PPS) therapies for pain are highly variable in design and believed to contribute to poor internal validity. However, it has not been formally tested whether the extent to which sham controls resemble the treatment under investigation consistently affects trial outcomes, such as effect sizes, differential attrition, participant expectancy, and blinding effectiveness. Placebo- or sham-controlled RCTs of PPS interventions of clinical pain populations were searched in 12 databases. The similarity of control interventions to the experimental treatment was rated across 25 features. Meta-regression analyses assessed putative links between employed control interventions, observed effect sizes in pain-related outcomes, attrition, and blinding success. The sample included 198 unique control interventions, dominated by manual therapy and chronic musculoskeletal pain research. Meta-analyses indicated small-to-moderate benefits of active treatments over control interventions, across subgroups of manual therapies, exercise, and rehabilitation, and psychological intervention trials. Multiple meta-regression modelling demonstrated that similarity between sham control and tested interventions predicted variability in pain-related outcomes, attrition, and blinding effectiveness. Influential variables were differences relating to the extent of intervention exposure, participant experience, and treatment environments. The results support the supposed link between blinding methods and effect sizes, based on a large and systematically sourced overview of methods. However, challenges to effective blinding are complex and often difficult to discern from trial reports. Nonetheless, these insights have the potential to change trial design, conduct, and reporting and will inform guideline development.


Assuntos
Dor Crônica , Autogestão , Humanos , Dor Crônica/terapia , Dor Crônica/psicologia , Exercício Físico , Terapia por Exercício/métodos , Exame Físico
4.
Anal Chem ; 94(40): 13958-13967, 2022 Oct 11.
Artigo em Inglês | MEDLINE | ID: mdl-36174068

RESUMO

Higher-energy collisional dissociation (HCD) of modified ribonucleosides generates characteristic and highly reproducible nucleoside-specific tandem mass spectra (MS/MS). Here, we demonstrate the capability of HCD spectra in combination with spectral matching for the semi-automated characterization of ribonucleosides. This process involved the generation of an HCD spectral library and the establishment of a mass spectral network for rapid detection with high sensitivity and specificity in a retention time-independent fashion. Systematic spectral matching analysis of the MS/MS spectra of tRNA hydrolysates from different organisms has helped us to uncover evidence for the existence of novel ribonucleoside modifications such as s2Cm and OHyW-14. Such an untargeted label-free approach has the potential to be integrated with other methods, including those that use isotope labeling, to simplify the characterization of unknown modified ribonucleosides. These findings suggest the compilation of a universal spectral network, for the characterization of known and unknown ribonucleosides, could accelerate discoveries in the epitranscriptome.


Assuntos
Ribonucleosídeos , Espectrometria de Massas em Tandem , Marcação por Isótopo , Nucleosídeos , RNA de Transferência , Ribonucleosídeos/análise , Espectrometria de Massas em Tandem/métodos
5.
Artigo em Inglês | MEDLINE | ID: mdl-35694032

RESUMO

Proteins by and large carry out their molecular functions in a folded state when residues, distant in sequence, assemble together in 3D space to bind a ligand, catalyze a reaction, form a channel, or exert another concerted macromolecular interaction. It has been long recognized that covariance of amino acids between distant positions within a protein sequence allows for the inference of long range contacts to facilitate 3D structure modeling. In this work, we investigated whether covariance analysis may reveal residues involved in the same molecular function. Building upon our previous work, CoeViz, we have conducted a large scale covariance analysis among 7595 non-redundant proteins with resolved 3D structures to assess (1) whether the residues with the same function coevolve, (2) which covariance metric captures such couplings better, and (3) how different molecular functions compare in this context. We found that the chi-squared metric is the most informative for the identification of coevolving functional sites, followed by the Pearson correlation-based, whereas mutual information is the least informative. Of the seven categories of the most common natural ligands, including coenzyme A, dinucleotide, DNA/RNA, heme, metal, nucleoside, and sugar, the trace metal binding residues display the most prominent coupling, followed by the sugar binding sites. We also developed a web-based tool, CoeViz 2, that enables the interactive visualization of covarying residues as cliques from a larger protein graph. CoeViz 2 is publicly available at https://research.cchmc.org/CoevLab/.

6.
J Photochem Photobiol B ; 214: 112100, 2021 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-33316625

RESUMO

Photobiomodulation (PBM) is reported to impart a range of clinical benefits, from the healing of chronic wounds to athletic performance enhancement. The increasing prevalence of this therapy conflicts with the lack of understanding concerning specific cellular mechanisms induced by PBM. Herein, we systematically explore the literature base, specifically related to PBM (within the range 600-1070 nm) and its influence on dermal fibroblasts. The existing research in this field is appraised through five areas: cellular proliferation and viability; cellular migration; ATP production and mitochondrial membrane potential; cellular protein expression and synthesis; and gene expression. This review demonstrates that when fibroblasts are irradiated in vitro within a set range of intensities, they exhibit a multitude of positive effects related to the wound healing process. However, the development of an optimal in vitro framework is paramount to improve the reliability and validity of research in this field.


Assuntos
Fibroblastos/efeitos da radiação , Terapia com Luz de Baixa Intensidade/métodos , Cicatrização/efeitos da radiação , Linhagem Celular , Movimento Celular/efeitos da radiação , Proliferação de Células/efeitos da radiação , Sobrevivência Celular/efeitos da radiação , Fibroblastos/citologia , Regulação da Expressão Gênica/efeitos da radiação , Humanos , Técnicas In Vitro , Proteínas/genética , Proteínas/metabolismo , Pele
8.
PLoS One ; 8(8): e71515, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24023611

RESUMO

The recent detection and isolation of C. ureolyticus from patients with diarrhoeal illness and inflammatory bowel diseases warrants further investigation into its role as an emerging pathogen of the human gastrointestinal tract. Regarding the pathogenic mechanisms employed by this species we provide the first whole genome analysis of two C. ureolyticus isolates including the type strain. Comparative analysis, subtractive hybridisation and gene ontology searches against other Campylobacter species identifies the high degree of heterogenicity between C. ureolyticus isolates, in addition to the identification of 106 putative virulence associated factors, 52 of which are predicted to be secreted. Such factors encompass each of the known virulence tactics of pathogenic Campylobacter spp. including adhesion and colonisation (CadF, PEB1, IcmF and FlpA), invasion (ciaB and 16 virB-virD4 genes) and toxin production (S-layer RTX and ZOT). Herein, we provide the first virulence catalogue for C. ureolyticus, the components of which theoretically provide this emerging species with sufficient arsenal to establish pathology.


Assuntos
Infecções por Campylobacter/microbiologia , Campylobacter/genética , Campylobacter/patogenicidade , Trato Gastrointestinal/microbiologia , Trato Gastrointestinal/patologia , Variação Genética , Genoma Bacteriano/genética , Antitoxinas/genética , Aderência Bacteriana/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sistemas de Secreção Bacterianos/genética , Toxinas Bacterianas/genética , Infecções por Campylobacter/genética , Biologia Computacional , Sequência Conservada/genética , Eletroforese em Gel de Poliacrilamida , Evolução Molecular , Genes Bacterianos/genética , Humanos , Dados de Sequência Molecular , Fases de Leitura Aberta/genética , Solubilidade , Sintenia/genética , Virulência/genética
10.
FEMS Immunol Med Microbiol ; 63(2): 248-53, 2011 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-22077228

RESUMO

Infections with Campylobacter spp. pose a significant health burden worldwide. The significance of Campylobacter jejuni/Campylobacter coli infection is well appreciated but the contribution of non-C. jejuni/C. coli spp. to human gastroenteritis is largely unknown. In this study, we employed a two-tiered molecular study on 7194 patient faecal samples received by the Microbiology Department in Cork University Hospital during 2009. The first step, using EntericBio(®) (Serosep), a multiplex PCR system, detected Campylobacter to the genus level. The second step, utilizing Campylobacter species-specific PCR identified to the species level. A total of 340 samples were confirmed as Campylobacter genus positive, 329 of which were identified to species level with 33 samples containing mixed Campylobacter infections. Campylobacter jejuni, present in 72.4% of samples, was the most common species detected, however, 27.4% of patient samples contained non-C. jejuni/C. coli spp.; Campylobacter fetus (2.4%), Campylobacter upsaliensis (1.2%), Campylobacter hyointestinalis (1.5%), Campylobacter lari (0.6%) and an emerging species, Campylobacter ureolyticus (24.4%). We report a prominent seasonal distribution for campylobacteriosis (Spring), with C. ureolyticus (March) preceeding slightly C. jejuni/C. coli (April/May).


Assuntos
Infecções por Campylobacter/epidemiologia , Infecções por Campylobacter/microbiologia , Campylobacter/classificação , Campylobacter/isolamento & purificação , Gastroenterite/epidemiologia , Gastroenterite/microbiologia , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Técnicas Bacteriológicas/métodos , Campylobacter/genética , Criança , Pré-Escolar , Fezes/microbiologia , Feminino , Humanos , Irlanda/epidemiologia , Masculino , Pessoa de Meia-Idade , Técnicas de Diagnóstico Molecular/métodos , Reação em Cadeia da Polimerase/métodos , Prevalência , Estações do Ano , Adulto Jovem
11.
FEMS Immunol Med Microbiol ; 61(2): 228-30, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-21320172

RESUMO

A total of 7194 faecal samples collected over a 1-year period from patients presenting with diarrhoea were screened for Campylobacter spp. using EntericBio(®) , a multiplex-PCR system. Of 349 Campylobacter-positive samples, 23.8% were shown to be Campylobacter ureolyticus, using a combination of 16S rRNA gene analysis and highly specific primers targeting the HSP60 gene of this organism. This is, to the best of our knowledge, the first report of C. ureolyticus in the faeces of patients presenting with gastroenteritis and may suggest a role for this organism as an emerging enteric pathogen.


Assuntos
Infecções por Campylobacter/microbiologia , Campylobacter/classificação , Campylobacter/isolamento & purificação , Doenças Transmissíveis Emergentes/microbiologia , Gastroenterite/microbiologia , Idoso , Idoso de 80 Anos ou mais , Campylobacter/genética , Chaperonina 60/genética , Criança , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Diarreia/microbiologia , Fezes/microbiologia , Feminino , Humanos , Lactente , Masculino , Pessoa de Meia-Idade , RNA Ribossômico 16S/genética , Análise de Sequência de DNA
12.
Infect Genet Evol ; 10(7): 1110-6, 2010 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-20637901

RESUMO

Tuberculosis has had significant effects on Ireland over the past two centuries, causing persistently higher morbidity and mortality than in neighbouring countries until the last decade. This study describes the results of genotyping and drug susceptibility testing of 171 strains of Mycobacterium tuberculosis complex isolated between January 2004 and December 2006 in a region of Ireland centred on the city of Cork. Spoligotype comparisons were made with the SpolDB4 database and clustered 130 strains in 23 groups, forty-one strains showed unique Spoligotyping patterns. The commonest spoligotypes detected were ST0137 (X2) (16.9%), and ST0351 (15.8%) ('U' clade). The major spoligotype clades were X (26.2%), U (19.3%), T (15.2%), Beijing (5.9%), Haarlem (4.7%), LAM (4.1%), BOVIS (1.75%), with 12.9% unassigned strains. A 24-locus VNTR genotyping produced 15 clusters containing 49 isolates, with high discrimination index (HGDI>0.99). A combination of Spoligotyping and VNTR reduced the number of clustered isolates to 47 in 15 clusters (27.5%). This study identified ST351 as common among Irish nationals, and found a low rate of drug resistance with little evidence of transmission of drug resistant strains. Strain clustering was significantly associated with age under 55 years and Irish nationality. Only strains of Euro-American lineage formed clusters. Molecular typing did not completely coincide with the results of contact investigations.


Assuntos
Mycobacterium tuberculosis/genética , Tuberculose/epidemiologia , Tuberculose/microbiologia , Adulto , Idoso , Técnicas de Tipagem Bacteriana , Análise por Conglomerados , Humanos , Irlanda/epidemiologia , Pessoa de Meia-Idade , Epidemiologia Molecular , Mycobacterium tuberculosis/classificação
13.
J Clin Pathol ; 63(5): 431-3, 2010 May.
Artigo em Inglês | MEDLINE | ID: mdl-20360139

RESUMO

OBJECTIVES: To improve the detection of Neisseria gonorrhoeae by designing a multiplex PCR assay using two N gonorrhoeae-specific genes as targets, thereby providing detection and confirmation of a positive result simultaneously. METHODS: PCR primers were designed to detect two N gonorrhoeae genes, namely porA and pgi1. Primers for an internal control targeting the ompW gene of Vibrio cholerae were also designed and incorporated in the assay. The DNA of 45 clinical isolates including 33 N gonorrhoeae isolates, seven non-gonococcal Neisseria species, and five non-Neisseria species was tested using the multiplex PCR assay. RESULTS: All 33 N gonorrhoeae isolates were successfully detected by the assay and none of the non-gonococcal isolates was detected. The assay showed a sensitivity and specificity of 100%, and a limit of detection of 1.25 ng of DNA. CONCLUSION: This multiplex PCR assay offers a sensitive and specific assay suitable for the detection of N gonorrhoeae, and offers real potential for diagnostic use.


Assuntos
Gonorreia/diagnóstico , Neisseria gonorrhoeae/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , DNA Bacteriano/análise , Genes Bacterianos , Humanos , Neisseria gonorrhoeae/genética , Porinas/genética , Sensibilidade e Especificidade
14.
J Clin Microbiol ; 47(11): 3449-53, 2009 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-19726596

RESUMO

The EntericBio system uses a multiplex PCR assay for the simultaneous detection of Campylobacter spp., Salmonella enterica, Shigella spp., and Escherichia coli O157 from feces. It combines overnight broth enrichment with PCR amplification and detection by hybridization. An evaluation of this system was conducted by comparing the results obtained with the system with those obtained by routine culture, supplemented with alternative PCR detection methods. In a study of 773 samples, routine culture and the EntericBio system yielded 94.6 and 92.4% negative results, respectively. Forty-two samples had positive results by culture, and all of these were positive with the EntericBio system. This system detected an additional 17 positive samples (Campylobacter spp., n = 12; Shigella spp., n = 1; E. coli O157, n = 4), but the results for 5 samples (Campylobacter spp., n = 2; Shigella spp., n = 1; E. coli O157, n = 2) could not be confirmed. The target for Shigella spp. detected by the EntericBio system is the ipaH gene, and the molecular indication of the presence of Shigella spp. was investigated by sequence analysis, which confirmed that the ipaH gene was present in a Klebsiella pneumoniae isolate from the patient. The sensitivity, specificity, positive predictive value, and negative predictive value were 100%, 99.3%, 91.5%, and 100%, respectively. Turnaround times were significantly reduced with the EntericBio system, and a result was available between 24 and 32 h after receipt of the sample in the laboratory. In addition, the amount of laboratory waste was significantly reduced by use of this system. In summary, the EntericBio system proved convenient to use, more sensitive than the conventional culture used in this study, and highly specific; and it generated results significantly faster than routine culture for the pathogens tested.


Assuntos
Técnicas Bacteriológicas/métodos , Campylobacter/isolamento & purificação , Enterobacteriaceae/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Campylobacter/genética , Campylobacter/crescimento & desenvolvimento , Enterobacteriaceae/genética , Enterobacteriaceae/crescimento & desenvolvimento , Humanos , Técnicas de Diagnóstico Molecular/métodos , Hibridização de Ácido Nucleico/métodos , Valor Preditivo dos Testes , Kit de Reagentes para Diagnóstico , Sensibilidade e Especificidade , Fatores de Tempo
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