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1.
J Biol Chem ; 270(8): 3788-95, 1995 Feb 24.
Artigo em Inglês | MEDLINE | ID: mdl-7876120

RESUMO

We have investigated the unusual import pathway of cytochrome c oxidase subunit Va (COXVa) into the yeast mitochondrial inner membrane by use of mutants that lack import receptors or are defective in matrix hsp70. (i) Mitochondria lacking the receptor MOM72 are not impaired in import of COXVa. Mitochondria lacking the main receptor MOM19 are moderately reduced in import of COXVa; this, however, is caused by a reduction of the inner membrane potential and not by a lack of specific receptor functions. (ii) Mitochondria defective in the unfoldase function of matrix hsp70 efficiently import COXVa, whereas mitochondria defective in the translocase function of the hsp70 are blocked in import of COXVA. A COXVa construct where the internal hydrophobic sorting signal is placed close to the presequence does not require either hsp70 function. These results demonstrate that import of COXVa does not require MOM19 or MOM72, but they unexpectedly reveal a strong dependence on the translocase function of matrix hsp70. Two important implications about the characterization of mitochondrial protein import in general are obtained. First, the interpretation of import results with mutants lacking MOM19 have to consider effects on the membrane potential. Second, the distance between a matrix targeting sequence and a hydrophobic sorting sequence within a precursor appears to determine if the inner membrane sorting machinery can substitute for the translocase function of hsp70 or not.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Proteínas de Choque Térmico HSP70/metabolismo , Mitocôndrias/metabolismo , Saccharomyces cerevisiae/metabolismo , Transporte Biológico , Membranas Intracelulares/enzimologia , Membranas Intracelulares/metabolismo , Potenciais da Membrana , Mitocôndrias/enzimologia , Mutação , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/genética
2.
Proc Natl Acad Sci U S A ; 91(15): 7345-9, 1994 Jul 19.
Artigo em Inglês | MEDLINE | ID: mdl-8041793

RESUMO

The yeast COX5a and COX5b genes encode isoforms of subunit Va of the mitochondrial inner membrane protein complex cytochrome c oxidase. These genes have been shown to be inversely regulated at the level of transcription by oxygen, which functions through the metabolic coeffector heme. In earlier studies we identified several regulatory elements that control transcriptional activation and aerobic repression of one of these genes, COX5b. Here, we report the isolation of trans-acting mutants that are defective in the aerobic repression of COX5b transcription. The mutants fall into two complementation groups. One group specifies ROX1, which encodes a product reported to be involved in transcriptional repression. The other group identified the gene we have designated ORD1. Mutations in ORD1 cause overexpression of COX5b aerobically but do not affect the expression of the hypoxic genes CYC7, HEM13, and ANB1. ORD1 mutations also do not affect the expression of the aerobic genes COX5a, CYC1, ROX1, ROX3, and TIF51A. The yeast genome contains a single ORD1 gene that resides on chromosome XI. Strains carrying chromosomal deletions of the ORD1 locus are viable and exhibit phenotypes similar to, but less severe than, that of the original mutant. The nucleotide sequence of ORD1 revealed that it is identical to IXR1, a yeast gene whose product contains two high mobility group boxes, binds to platinated DNA, and confers sensitivity to the antitumor drug cisplatin. Consistent with the latter observations, we found that the ORD1 product could bind to both the upstream region of COX5b and to DNA modified with cisplatin.


Assuntos
Cisplatino/farmacologia , Proteínas de Ligação a DNA , Proteínas Fúngicas/metabolismo , Genes Fúngicos , Proteínas de Grupo de Alta Mobilidade/metabolismo , Oxigênio/metabolismo , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/genética , Fatores de Transcrição/metabolismo , Sequência de Aminoácidos , Sequência de Bases , Clonagem Molecular , DNA Fúngico , Regulação Fúngica da Expressão Gênica , Dados de Sequência Molecular , Saccharomyces cerevisiae/efeitos dos fármacos
3.
J Biol Chem ; 269(9): 6437-43, 1994 Mar 04.
Artigo em Inglês | MEDLINE | ID: mdl-8119994

RESUMO

Previous work has shown that when yeast mitochondria are incubated in the presence of the presequence peptide pL4(1-22), the peptide is imported and accumulates within the mitochondrial membranes, presumably at the import sites. If the extramitochondrial concentration of peptide is sufficiently high, enough peptide accumulates within the import sites to prevent the uptake of authentic precursor proteins. We have used chemical cross-linking to probe the interaction of this peptide with yeast mitochondrial proteins. We found that radiolabeled pL4(1-22) could be reproducibly cross-linked to a number of polypeptides. Interestingly, nearly all were membrane proteins. Several of the cross-linked proteins were located in the outer membrane, while others were located in the inner membrane. The interaction between the peptide and many of the cross-linked products was shown to be specific by two independent criteria. First, an excess of unlabeled peptide acted as a competitor in the cross-linking reaction, and, second, treatment of the peptide with the alkylating agent N-ethylmaleimide dramatically reduced its ability to form cross-links. Two of the cross-linked species corresponded to the outer membrane proteins, Mas70p and ISP42. Significantly, both of these proteins have previously been shown to play critical roles in mitochondrial protein import. While the role of the other cross-linked proteins in the import process remains to be determined, the results of this study demonstrate that our experimental approach may be useful in identifying components of the import machinery as well as proteins that interact with mitochondrial presequences.


Assuntos
Proteínas Fúngicas/metabolismo , Proteínas de Membrana/metabolismo , Mitocôndrias/metabolismo , Receptores de Superfície Celular/metabolismo , Proteínas de Saccharomyces cerevisiae , Saccharomyces cerevisiae/metabolismo , Reagentes de Ligações Cruzadas , Eletroforese em Gel de Poliacrilamida , Etilmaleimida/farmacologia , Proteínas Fúngicas/isolamento & purificação , Membranas Intracelulares/metabolismo , Proteínas de Membrana/isolamento & purificação , Proteínas de Transporte da Membrana Mitocondrial , Proteínas do Complexo de Importação de Proteína Precursora Mitocondrial , Peptídeos/síntese química , Peptídeos/metabolismo , Receptores de Superfície Celular/isolamento & purificação
4.
J Cell Biol ; 121(5): 1021-9, 1993 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-8388875

RESUMO

We have continued our studies on the import pathway of the precursor to yeast cytochrome c oxidase subunit Va (pVa), a mitochondrial inner membrane protein. Previous work on this precursor demonstrated that import of pVa is unusually efficient, and that inner membrane localization is directed by a membrane-spanning domain in the COOH-terminal third of the protein. Here we report the results of studies aimed at analyzing the intramitochondrial sorting of pVa, as well as the role played by ancillary factors in import and localization of the precursor. We found that pVa was efficiently imported and correctly sorted in mitochondria prepared from yeast strains defective in the function of either mitochondrial heat shock protein (hsp)60 or hsp70. Under identical conditions the import and sorting of another mitochondrial protein, the precursor to the beta subunit of the F1 ATPase, was completely defective. Consistent with previous results demonstrating that the subunit Va precursor is loosely folded, we found that pVa could be efficiently imported into mitochondria after translation in wheat germ extracts. This results suggests that normal levels of extramitochondrial hsp70 are also not required for import of the protein. The results of this study enhance our understanding of the mechanism by which pVa is routed to the mitochondrial inner membrane. They suggest that while the NH2 terminus of pVa is exposed to the matrix and processed by the matrix metalloprotease, the protein remains anchored to the inner membrane before being assembled into a functional holoenzyme complex.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Mitocôndrias/enzimologia , Compartimento Celular , Proteínas Fúngicas/metabolismo , Proteínas de Choque Térmico/metabolismo , Substâncias Macromoleculares , Mitocôndrias/ultraestrutura , Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/ultraestrutura
5.
J Cell Biol ; 112(5): 833-41, 1991 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-1847927

RESUMO

We have studied the import of the precursor to yeast cytochrome c oxidase subunit Va, a protein of the mitochondrial inner membrane. Like the majority of mitochondrial precursor proteins studied thus far, import of presubunit Va was dependent upon both a membrane potential (delta psi) and the hydrolysis of ATP. However, the levels of ATP necessary for the import of presubunit Va were significantly lower than those required for the import of a different mitochondrial precursor protein, the beta subunit of the F1-ATPase. The rate of import of presubunit Va was found to be unaffected by temperature over the range 0 to 30 degrees C, and was not facilitated by prior denaturation of the protein. These results, in conjunction with those of an earlier study demonstrating that presubunit Va could be efficiently targeted to mitochondria with minimal presequences, suggest that the subunit Va precursor normally exists in a loosely folded conformation. Presubunit Va could also be imported into mitochondria that had been pretreated with high concentrations of trypsin or proteinase K (1 mg/ml and 200 micrograms/ml, respectively). Furthermore, the rate of import into trypsin-treated mitochondria, at both 0 and 30 degrees C, was identical to that observed with the untreated organelles. Thus, import of presubunit Va is not dependent upon the function of a protease-sensitive surface receptor. When taken together, the results of this study suggest that presubunit Va follows an unusual import pathway. While this pathway uses several well-established translocation steps, in its entirety it is distinct from either the receptor-independent pathway used by apocytochrome c, or the more general pathway used by a majority of mitochondrial precursor proteins.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Precursores Enzimáticos/metabolismo , Mitocôndrias/metabolismo , Saccharomyces cerevisiae/metabolismo , Trifosfato de Adenosina/metabolismo , Transporte Biológico , Endopeptidase K , Cinética , Potenciais da Membrana , Mitocôndrias/enzimologia , Modelos Biológicos , Desnaturação Proteica , ATPases Translocadoras de Prótons/metabolismo , Receptores de Superfície Celular/metabolismo , Saccharomyces cerevisiae/enzimologia , Serina Endopeptidases/metabolismo , Temperatura , Tripsina/metabolismo
6.
Mol Cell Biol ; 10(10): 5510-20, 1990 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-2169024

RESUMO

The Saccharomyces cerevisiae COX5b gene is regulated at the level of transcription by both the carbon source and oxygen. To define the cis-acting elements that underlie this transcriptional control, deletion analysis of the upstream regulatory region of COX5b was performed. The results of the study suggest that at least four distinct regulatory sites are functional upstream of the COX5b transcriptional starts. One, which was precisely defined to a region of 20 base pairs, contains two TATA-like elements. Two upstream activating sequences (UAS15b and UAS2(5b)) and an upstream repression sequence (URS5b) were also found. Each of the latter three elements was able either to activate (UAS1(5b) and UAS2(5b)) or to repress URS5b) the transcription of a heterologous yeast gene. Further analysis revealed that UAS1(5b) is the site of carbon source control and may be composed of two distinct domains that act synergistically. URS5b mediates the aerobic repression of COX5b and contains two sequences that are highly conserved in other yeast genes negatively regulated by oxygen.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Regulação Fúngica da Expressão Gênica/fisiologia , Sequências Reguladoras de Ácido Nucleico , Saccharomyces cerevisiae/genética , Sequência de Bases , Análise Mutacional de DNA , Replicação do DNA , Genes Fúngicos , Glucose/fisiologia , Heme/fisiologia , Dados de Sequência Molecular , Mapeamento por Restrição , Transcrição Gênica
7.
J Biol Chem ; 265(15): 8808-16, 1990 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-2160469

RESUMO

We show that a synthetic peptide corresponding to the N-terminal 22 residues of the cytochrome c oxidase subunit IV presequence blocked import of pre-subunit IV into yeast mitochondria. The 22-residue peptide pL4-(1-22) did not alter the electrical potential across the mitochondrial inner membrane (the delta psi). Inhibition of import was reversible and could be overcome by the addition of increased amounts of precursor. Two other peptides, pL4-(1-16) and pL4-(1-23), which correspond to, respectively, the N-terminal 16 and 23 residues of the same presequence, also blocked import of pre-subunit IV. However, pL4-(1-16) was a much weaker inhibitor of import, while the inhibitory effect of pL4-(1-23) was due to its ability to completely collapse the delta psi. pL4-(1-22) seems to be a general inhibitor of mitochondrial import, in that it also blocked uptake of several other proteins. These included the precursors of the yeast proteins cytochrome c oxidase subunit Va, the F1-ATPase beta subunit, mitochondrial malate dehydrogenase, and the ATP/ADP carrier. In addition, uptake of two non-yeast precursor proteins (human ornithine transcarbamylase and a cytochrome oxidase subunit IV-dihydrofolate reductase fusion), was also blocked by the peptide. Subsequent studies revealed that pL4-(1-22) did not block the initial recognition or binding of proteins to mitochondria. Rather, our results suggest that the peptide acts at a subsequent translocation step which is common to the import pathways of many different precursor proteins.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Precursores Enzimáticos/genética , Mitocôndrias/metabolismo , Peptídeos/farmacologia , Processamento de Proteína Pós-Traducional , Saccharomyces cerevisiae/metabolismo , Sequência de Aminoácidos , Precursores Enzimáticos/metabolismo , Humanos , Cinética , Substâncias Macromoleculares , Mitocôndrias/efeitos dos fármacos , Dados de Sequência Molecular , Peptídeos/síntese química , Plasmídeos , Biossíntese de Proteínas , RNA Mensageiro/genética , Transcrição Gênica
8.
J Biol Chem ; 265(15): 8817-22, 1990 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-2160470

RESUMO

In the accompanying paper (Glaser, S. M., and Cumsky, M. G. (1990) J. Biol. Chem. 265, 8808-8816) we demonstrated that pL4-(1-22), a synthetic peptide corresponding to the N-terminal 22 residues of the cytochrome c oxidase subunit IV presequence, blocked protein import into mitochondria. Import inhibition was reversible and occurred at a step subsequent to the initial recognition and binding of precursor proteins to the mitochondrial surface. In the present work we have studied the nature of the association between the peptide and mitochondria, as well as determined its intramitochondrial location. We found that pL4-(1-22) was imported into mitochondria in a manner that was dependent upon the delta psi and that the majority of the mitochondrially associated peptide was in the membrane fraction. Density gradient analysis of total membranes indicated that pL4-(1-22) cofractionated with the inner membrane, although the possibility that it was present in both membranes could not be ruled out. It appeared to be inserted within the bilayer since it could not be extracted with salts, chaotropic agents, or high pH. We observed a steady decrease in the amount of pL4-(1-22) found within peptide-treated mitochondria over time. Coincident with this decrease was an increase in the ability of those mitochondria to import and process precursor proteins, suggesting that the peptide was ultimately turned over. The results presented here correlate well with those of the accompanying paper. Together they suggest that pL4-(1-22) blocks import at the level of the mitochondrial membranes, although the exact nature of the import block is not yet clear.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Precursores Enzimáticos/genética , Mitocôndrias/metabolismo , Peptídeos/farmacologia , Processamento de Proteína Pós-Traducional , Saccharomyces cerevisiae/metabolismo , Anticorpos/isolamento & purificação , Complexo Antígeno-Anticorpo , Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Precursores Enzimáticos/metabolismo , Cinética , Bicamadas Lipídicas , Substâncias Macromoleculares , Peptídeos/síntese química
9.
Mol Cell Biol ; 10(5): 1873-81, 1990 May.
Artigo em Inglês | MEDLINE | ID: mdl-2157966

RESUMO

We have examined the import and intramitochondrial localization of the precursor to yeast cytochrome c oxidase subunit Va, a protein of the mitochondrial inner membrane. The results of studies on the import of subunit Va derivatives carrying altered presequences suggest that the uptake of this protein is highly efficient. We found that a presequence of only 5 amino acids (Met-Leu-Ser-Leu-Arg) could direct the import and localization of subunit Va with wild-type efficiency, as judged by several different assays. We also found that subunit Va could be effectively targeted to the mitochondrial inner membrane with a heterologous presequence that failed to direct import of its cognate protein. The results presented here confirmed those of an earlier study and showed clearly that the information required to "sort" subunit Va to the inner membrane resides in the mature protein sequence, not within the presequence per se. We present additional evidence that the aforementioned sorting information is contained, at least in part, in a hydrophobic stretch of 22 amino acids residing within the C-terminal third of the protein. Removal of this domain caused subunit Va to be mislocalized to the mitochondrial matrix.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/metabolismo , Membranas Intracelulares/metabolismo , Proteínas de Membrana/metabolismo , Mitocôndrias/metabolismo , Sequência de Aminoácidos , Compartimento Celular , Substâncias Macromoleculares , Proteínas de Membrana/ultraestrutura , Dados de Sequência Molecular , Proteínas Recombinantes de Fusão/metabolismo , Proteínas Recombinantes de Fusão/ultraestrutura , Saccharomyces cerevisiae , Solubilidade , Relação Estrutura-Atividade
10.
Mol Cell Biol ; 9(6): 2765-70, 1989 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-2548089

RESUMO

The Saccharomyces cerevisiae COX5b gene contains a small intron that is unique in two respects. First, it interrupts the ATG codon that initiates translation of the COX5b product. Second, it contains a sequence at the 5' splice junction (5'-GCATGT-3') that differs from the highly conserved yeast hexanucleotide (5'-GTAPyGT-3') and from the 5'-GT found at the corresponding position in nearly all introns of eucaryotic protein-coding genes. We have analyzed both the transcripts derived from the COX5b gene and the splicing of its intron. We show here that an unspliced mRNA precursor constituted a minor fraction of the total COX5b message, even when the gene was overexpressed. We also show that both major transcripts derived from COX5b had been spliced. Our results suggest that at least in the case of COX5b, a 5'-GC can function as efficiently as the highly conserved 5'-GT in the splicing reaction.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Íntrons , Splicing de RNA , RNA Mensageiro/metabolismo , Saccharomyces cerevisiae/genética , Sequência de Aminoácidos , Sequência de Bases , DNA/genética , Dados de Sequência Molecular , Mutação , Plasmídeos , Precursores de RNA/genética , Precursores de RNA/metabolismo , Saccharomyces cerevisiae/metabolismo
11.
Mol Cell Biol ; 9(5): 1958-64, 1989 May.
Artigo em Inglês | MEDLINE | ID: mdl-2546055

RESUMO

The COX5a and COX5b genes encode divergent forms of yeast cytochrome c oxidase subunit V. Although the polypeptide products of the two genes are functionally interchangeable, it is the Va subunit that is normally found in preparations of yeast mitochondria and cytochrome c oxidase. We show here that the predominance of subunit Va stems in part from the differential response of the two genes to the presence of molecular oxygen. Our results indicate that during aerobic growth, COX5a levels were high, while COX5b levels were low. Anaerobically, the pattern was reversed; COX5a levels dropped sevenfold, while those of COX5b were elevated sevenfold. Oxygen appeared to act at the level of transcription through heme, since the addition of heme restored an aerobic pattern of transcription to anaerobically grown cells and the effect of anaerobiosis on COX5 transcription was reproduced in strains containing a mutation in the heme-biosynthetic pathway (hem1). In conjunction with the oxygen-heme response, we determined that the product of the ROX1 gene, a trans-acting regulator of several yeast genes controlled by oxygen, is also involved in COX5 expression. These results, as well as our observation that COX5b expression varied significantly in certain yeast strains, indicate that the COX5 genes undergo a complex pattern of regulation. This regulation, especially the increase in COX5b levels anaerobically, may reflect an attempt to modulate the activity of a key respiratory enzyme in response to varying environmental conditions. The results presented here, as well as those from other laboratories, suggest that the induction or derepression of certain metabolic enzymes during anaerobiosis may be a common and important physiological response in yeast cells.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Genes Fúngicos , Saccharomyces cerevisiae/genética , Aerobiose , Anaerobiose , Regulação da Expressão Gênica , Heme/metabolismo , Oxigênio/metabolismo , Saccharomyces cerevisiae/metabolismo , Especificidade da Espécie
12.
J Cell Biochem ; 36(3): 275-87, 1988 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-3288645

RESUMO

In order to facilitate studies on protein localization to and sorting within yeast mitochondria, we have designed an experimental system that utilizes a new vector and a functional assay. The vector, which we call an LPS plasmid (for leader peptide substitution), employs a yeast COX5a gene (the structural gene for subunit Va of the inner membrane protein complex cytochrome c oxidase) as a convenient reporter for correct mitochondrial localization. Using in vitro mutagenesis, we have modified COX5a so that the DNA sequences encoding the wild-type subunit Va leader peptide can be precisely deleted and replaced with a given test sequence. The substituted leader peptide can then be analyzed for its ability to direct subunit Va to the inner mitochondrial membrane (to target and sort) by complementation or other in vivo assays. In this study we have tested the ability of several heterologous sequences to function in this system. The results of these experiments indicate that a functional leader peptide is required to target subunit Va to mitochondria. In addition, leader peptides, or portions thereof, derived from proteins located in other mitochondrial compartments can also be used to properly localize this polypeptide. The results presented here also indicate that the information necessary to sort subunit Va to the inner mitochondrial membrane does not reside in the leader peptide but rather in the mature subunit Va sequence.


Assuntos
Vetores Genéticos , Proteínas de Membrana/análise , Mitocôndrias/análise , Saccharomyces cerevisiae/genética , Sequência de Aminoácidos , Sequência de Bases , Proteínas Fúngicas/análise , Proteínas Fúngicas/genética , Proteínas de Membrana/genética , Dados de Sequência Molecular
13.
Mol Cell Biol ; 7(10): 3511-9, 1987 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-2824989

RESUMO

In Saccharomyces cerevisiae, subunit V of the inner mitochondrial membrane protein complex cytochrome c oxidase is encoded by two nonidentical genes, COX5a and COX5b. Both genes are present as single copies in S. cerevisiae and in several other Saccharomyces species. Nucleotide sequencing studies with the S. cerevisiae COX5 genes reveal that they encode proteins of 153 and 151 amino acids, respectively. Overall, the coding sequences of COX5a and COX5b have nucleotide and protein homologies of 67 and 66%, respectively. They are saturated for nucleotide substitutions that result in a synonomous codon, indicating a long divergence time between these two genes. Nucleotide sequences flanking the COX5a and COX5b coding regions exhibit no significant homology. The COX5a protein, pre-subunit Va, contains a 20-amino-acid leader peptide, whereas the COX5b protein, pre-subunit Vb, contains a 17-amino-acid leader peptide. These two leader peptides exhibit only 45% homology in the primary sequence, but have similar predicted secondary structures. By analyzing the RNA transcripts from both genes we have found that COX5a is a contiguous gene but that COX5b contains an intron. Surprisingly, the COX5b intron interrupts the AUG codon that initiates translation of the pre-subunit Vb polypeptide and contains a 5' donor splice sequence that differs from that normally found in yeast introns.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Genes Fúngicos , Saccharomyces cerevisiae/genética , Sequência de Aminoácidos , Sequência de Bases , Análise Mutacional de DNA , Complexo IV da Cadeia de Transporte de Elétrons/fisiologia , Genes , Dados de Sequência Molecular , Consumo de Oxigênio , Conformação Proteica , RNA Fúngico/genética , RNA Mensageiro/genética , Transcrição Gênica
14.
Proc Natl Acad Sci U S A ; 82(8): 2235-9, 1985 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-2986105

RESUMO

In Saccharomyces cerevisiae, the inner mitochondrial membrane protein cytochrome c oxidase is composed of nine polypeptide subunits. Six of these subunits (IV, V, VI, VII, VIIa, VIII) are encoded by the nuclear genome, and the remaining three (I, II, III) are encoded by mitochondrial DNA. We report here the existence of two nonidentical subunit V polypeptides, which are encoded by separate genes within the yeast genome. One gene, COX5a, encodes the polypeptide Va, normally found in preparations of holocytochrome c oxidase. The other gene, COX5b, encodes the polypeptide Vb, which cross-reacts with anti-subunit Va antiserum and restores respiratory competency and cytochrome oxidase activity in transformants of cox5a structural gene mutants. This polypeptide also copurifies with the holoenzyme prepared from these transformants. We have found that COX5b is expressed in vegetatively growing yeast cells, and that the Vb polypeptide can be detected in mitochondria from strain JM28, a cox5a mutant. This mutant has 15%-20% residual cytochrome oxidase activity, and it respires at 10%-15% the wild-type rate. By disrupting the COX5b gene in this strain, we show that this residual activity is directly attributable to the presence of a chromosomal copy of the COX5b gene. Taken together, these results suggest that Va or Vb can function as cytochrome oxidase subunits in yeast and that Vb may be used under some specific, as yet undefined, physiological conditions.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Saccharomyces cerevisiae/enzimologia , Sequência de Bases , Clonagem Molecular , Genes Fúngicos , Mitocôndrias/enzimologia , Plasmídeos , Conformação Proteica , Saccharomyces cerevisiae/genética
15.
J Biol Chem ; 259(24): 15401-7, 1984 Dec 25.
Artigo em Inglês | MEDLINE | ID: mdl-6210289

RESUMO

Using synthetic oligodeoxyribonucleic acid probes we have identified and isolated COX6, the structural gene for subunit VI of cytochrome c oxidase from Saccharomyces cerevisiae. The nucleotide sequence of COX6 predicts an amino acid sequence, for the mature subunit VI polypeptide, which is in perfect agreement with that determined previously. The nucleotide sequence of COX6 also predicts that subunit VI is derived from a precursor with a highly basic 40-amino acid NH2-terminal presequence. This precursor has been observed after in vitro translations programmed by yeast poly(A+)RNA. Northern blot analysis of poly(A+) RNA from strain D273-10B reveals that COX6 is homologous to three RNAs of 1800, 900, and 700 bases in length. By means of Southern blot analysis, the cloned gene was shown to be co-linear with yeast chromosomal DNA and to exist in a single copy in the yeast genome. An additional open reading frame, consisting of 82 codons, terminates 22 codons upstream from COX6. It is "in frame" with the COX6 coding region.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Genes Fúngicos , Genes , Saccharomyces cerevisiae/enzimologia , Sequência de Aminoácidos , Sequência de Bases , Núcleo Celular/metabolismo , Clonagem Molecular , Enzimas de Restrição do DNA , Substâncias Macromoleculares , Peso Molecular , Hibridização de Ácido Nucleico , Poli A/genética , RNA/genética , RNA Mensageiro , Saccharomyces cerevisiae/genética
16.
J Cell Biochem ; 24(3): 229-42, 1984.
Artigo em Inglês | MEDLINE | ID: mdl-6330135

RESUMO

A nuclear pet mutant of Saccharomyces cerevisiae that is defective in the structural gene for subunit V of cytochrome c oxidase has been identified and used to clone the subunit V gene (COX5) by complementation. This mutant, E4-238 [24], and its revertant, JM110, produce variant forms of subunit V. In comparison to the wild-type polypeptide (Mr = 12,500), the polypeptides from E4-238 and JM110 have apparent molecular weights of 9,500 and 13,500, respectively. These mutations directly alter the subunit V structural gene rather than a gene required for posttranslational processing or modification of subunit V because they are cis-acting in diploid cells; that is, both parental forms of subunit V are produced in heteroallelic diploids formed from crosses between the mutant, revertant, and wild type. Several plasmids containing the COX5 gene were isolated by transformation of JM28, a derivative of E4-238, with DNA from a yeast nuclear DNA library in the vector YEp13. One plasmid, YEp13-511, with a DNA insert of 4.8 kilobases, was characterized in detail. It restores respiratory competency and cytochrome oxidase activity in JM28, encodes a new form of subunit V that is functionally assembled into mitochondria, and is capable of selecting mRNA for subunit V. The availability of mutants altered in the structural gene for subunit V (COX5) and of the COX5 gene on a plasmid, together with the demonstration that plasmid-encoded subunit V is able to assemble into a functional holocytochrome c oxidase, enables molecular genetic studies of subunit V assembly into mitochondria and holocytochrome c oxidase.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Proteínas Fúngicas/genética , Genes Fúngicos , Membranas Intracelulares/metabolismo , Proteínas de Membrana/metabolismo , Mitocôndrias/metabolismo , Saccharomyces cerevisiae/genética , Clonagem Molecular , Genes , Plasmídeos
17.
J Biol Chem ; 258(22): 13418-21, 1983 Nov 25.
Artigo em Inglês | MEDLINE | ID: mdl-6315696

RESUMO

The gene for yeast cytochrome c oxidase subunit V, COX5, has been isolated from a Saccharomyces cerevisiae DNA library by complementation of a cytochrome c oxidase subunit V mutant, JM28. One complementing plasmid, YEp13-511, with a DNA insert of 4.8 kilobase pairs, has been characterized in detail. This plasmid restores respiratory competency in JM28, results in increased cytochrome c oxidase activity and a new form of subunit V in JM28 mitochondria, and is capable of selecting mRNA for subunit V. These results indicate that YEp13-511 carries the COX5 gene and that the subunit V encoded by this plasmid gene is capable of entering the mitochondrion and assembling into a functional holocytochrome c oxidase.


Assuntos
Complexo IV da Cadeia de Transporte de Elétrons/genética , Genes , Mitocôndrias/enzimologia , Saccharomyces cerevisiae/enzimologia , Sequência de Bases , Enzimas de Restrição do DNA , DNA Fúngico/genética , DNA Fúngico/isolamento & purificação , Substâncias Macromoleculares , Mutação , Plasmídeos , Biossíntese de Proteínas , Saccharomyces cerevisiae/genética
18.
J Biol Chem ; 256(23): 12581-8, 1981 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-6795208

RESUMO

Myxococcus xanthus is a Gram-negative bacterium that has a complex life cycle which includes cellular aggregation and sporulation. During the period of cellular aggregation, a lectin-like protein called myxobacterial hemagglutinin (MBHA) is synthesized. A four-step purification procedure for MBHA is described. It consists of chromatography on DEAE-cellulose, CM-cellulose, and hydroxyapatite, followed by gel filtration on Bio-Gel P-30. This procedure gives good yields of MBHA (40-50%) free of contaminating proteins. The purified protein has been partially characterized. It exists as a monomer in solution with an apparent Mr = 28,000 and an isoelectric point of 8.3. The amino acid composition of MBHA has been determined. It shows a very high content of glycine (19%) as well as aromatic amino acids (9%); it has a low percentage of charged amino acids. No detectable carbohydrate was found in a large sample (50 micrograms) of MBHA. The far-ultraviolet CD spectrum of MBHA indicates a secondary structure which contains very little alpha-helix, 50 +/- 10% beta-sheet, and 50 +/- 10% random coil. MBHA comprises 1-2% of soluble protein of M. xanthus at the time of cellular aggregation. The fact that it is a lectin suggests that it may play a role in cell-cell recognition or adhesion.


Assuntos
Hemaglutininas/isolamento & purificação , Myxococcales/imunologia , Aminoácidos/análise , Agregação Celular , Dicroísmo Circular , Hemaglutinação , Soros Imunes , Imunodifusão , Cinética , Conformação Proteica
19.
J Biol Chem ; 256(23): 12589-95, 1981 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-6795209

RESUMO

During the period of developmental aggregation which precedes fruiting body formation, the bacterium Myxococcus xanthus produces a large amount of a lectin called myxobacterial hemagglutinin (MBHA). Sequential cell washing, osmotic shock, and disruption of developmental cells showed that as much as 90% of the total hemagglutinating activity can be recovered in the wash and shock fractions. Analysis of the wash and shock fluids by sodium dodecyl sulfate-polyacrylamide gel electrophoresis showed that these fractions are enriched in MBHA. MBHA was detected on the surface of developmental cells but not vegetative cells by immunofluorescent staining procedures. The fluorescence was localized in distinct patches which were usually located at one or both of the cell poles, although patches of fluorescence could also be seen at additional sites as well. The presence of MBHA on the cell surface was also detected by electron microscopy of developmental cells stained with ferritin-conjugated antibody. Most of the cells showed distinct patches of ferritin staining at one or both of the cell poles; nonpolar staining, which was also observed, was always accompanied by membrane protuberances. The amino acid sequence of the NH2 terminus of MBHA was determined and found to be extremely hydrophobic, suggesting that it may function as a nonprocessed signal for transmembrane transport. The site-specific localization of MBHA at the cell poles suggests that it may function in end-to-end cellular interactions during aggregation.


Assuntos
Hemaglutininas/análise , Myxococcales/crescimento & desenvolvimento , Sequência de Aminoácidos , Agregação Celular , Membrana Celular/análise , Hemaglutinação , Hemaglutininas/isolamento & purificação , Substâncias Macromoleculares , Peso Molecular , Myxococcales/imunologia
20.
J Biol Chem ; 256(23): 12596-9, 1981 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-6170645

RESUMO

The nature of the receptor for myxobacterial hemagglutinin (MBHA) on the outer surface of Myxococcus xanthus was investigated by studying the binding of 125I-MBHA to vegetative and developmental cells. The amount of binding and hence the number of binding sites/cell appeared to increase 4-fold during development to 2.1 X 10(4) sites/cell. Furthermore, the apparent association constant (Ka) for MBHA increased 3-fold to 3 X 10(7) M-1. Fetuin, a glycoprotein which binds MBHA, blocked the binding of 125I-MBHA to vegetative cells but not developmental cells. Thus, the MBHA binding sites from developmental cells clearly differ from the vegetative binding sites. The Ka for MBHA binding to sheep erythrocytes (3.5 X 10(6) M-1) was an order of magnitude lower than that of developmental M. xanthus cells. The erythrocyte binding sites are also much more sensitive to concanavalin A inhibition than the M. xanthus sites.


Assuntos
Hemaglutininas/imunologia , Myxococcales/imunologia , Animais , Concanavalina A/farmacologia , Eritrócitos/imunologia , Hemaglutinação , Cinética , Ovinos , alfa-Fetoproteínas/farmacologia
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