Arbuscular Mycorrhizal Fungi and Rhizobium Improve Nutrient Uptake and Microbial Diversity Relative to Dryland Site-Specific Soil Conditions.

Arbuscular mycorrhizal fungi (AMF) and rhizobium play a significant role in plant symbiosis. However, their influence on the rhizosphere soil microbiome associated with nutrient acquisition and soil health is not well defined in the drylands of Montana (MT), USA. This study investigated the effect of microbial inoculants as seed treatment on pea yield, nutrient uptake, potential microbial functions, and rhizosphere soil microbial communities using high-throughput sequencing of 16S and ITS rRNA genes. The experiment was conducted under two contrasting dryland conditions with four treatments: control, single inoculation with AMF or Rhizobium, and dual inoculations of AMF and Rhizobium (AMF+Rhizobium). Our findings revealed that microbial inoculation efficacy was site-specific. AMF+Rhizobium synergistically increased grain yield at Sidney dryland field site (DFS) 2, while at Froid site, DFS 1, AMF improved plant resilience to acidic soil but contributed a marginal yield under non-nutrient limiting conditions. Across dryland sites, the plants' microbial dependency on AMF+Rhizobium (12%) was higher than single inoculations of AMF (8%) or Rhizobium (4%) alone. Variations in microbial community structure and composition indicate a site-specific response to AMF and AMF+Rhizobium inoculants. Overall, site-specific factors significantly influenced plant nutrient uptake, microbial community dynamics, and functional potential. It underscores the need for tailored management strategies that consider site-specific characteristics to optimize benefits from microbial inoculation.

Analysis of the effects of in-situ chemical oxidation on microbial activity using Pseudomonas putida F1.

In-situ chemical oxidation is an effective groundwater remediation approach for delivering oxidants to the subsurface environment where various contaminants of concern, natural organic matter, and other reduced species within the soil consume the oxidants. The addition of these oxidants alters microbial activity changing the physical and chemical structure of the soil. This paper studied the effects of chemical oxidation on microbial activity with and without toluene. Several oxidants were used as part of the study: sodium percarbonate, hydrogen peroxide, potassium permanganate, and sodium persulfate evaluated at low, medium, and high concentrations. A series of biometer experiments seeded with microbe Pseudomonas putida F1 and soil sample and aqueous toluene solution for each oxidant was monitored by CO2 production as a function of incubation days to evaluate the effects of oxidation on the microbial activity. Of the oxidants tested, permanganate oxidation resulted in the highest increase in microbial activity post oxidation based on CO2 production both with and without the addition of toluene. The other oxidants exhibited a direct correlation between oxidant concentration and the change in permanganate chemical oxidant demand of the soil. However, there was no correlation between oxidant concentration and microbial activity. Each of the oxidants was shown to increase CO2 yield except for sodium percarbonate, which had an adverse effect on microbial activity. It is likely that the increased microbial activity associated with permanganate oxidation was the result of chemical reactions between the oxidant and natural organic matter in the soil.

Nitrogen dynamics affected by biochar and irrigation level in an onion field.

Soil amended with biochar has many potential environmental benefits, but its influence on the fate of nitrogen (N) under irrigated conditions is unclear. The objective of this research was to determine the effects of biochar and interactions with irrigation on N movement in soil, gas emissions, and leaching. A three-year study was conducted in an onion field with three main irrigation treatments (50, 75, and 100% of a reference that provided sufficient water for plant growth) and three biochar amendment rates (0 or control, low char - applied first year at 29 Mg ha-1, and high char - added both first and second year for a total 58 Mg ha-1) as sub-treatments in a split-plot design. Nitrogen fertilizer was applied three times during first year growing season, but weekly the second year. Ammonia (NH3) volatilization, nitrous oxide (N2O) emission, and nitrate (NO3-) in soil pore water were monitored during growing season, and annual N (total and NO3-) changes in soil profile were determined for first two years. Nitrate leaching was measured in the third year. Ammonia volatilization was affected by fertilization frequency with higher loss (5-8% of total applied) when fertilizer was applied in large doses during the first year compared to the second year (4-5%). Nitrous oxide emissions were ≤0.1% of applied N for both years and not affected by any treatments or fertilization frequency. Nitrate concentration in soil profile increased significantly as irrigation level dropped, but most of the NO3- was leached by winter rain. There was no significant biochar effect on total N gas emissions or soil NO3- accumulation, but significant irrigation effect and interaction with biochar were determined on soil NO3- accumulation. High leaching was associated with biochar amendment and higher irrigation level. Irrigation strategies are the key to improving N management and developing the best practices associated with biochar.

Microbial community biomass and structure in saline and non-saline soils associated with salt- and boron-tolerant poplar clones grown for the phytoremediation of selenium.

Poplar trees (Populus spp.) are often used in bioremediation strategies because of their ability to phytoextract potential toxic ions, e.g., selenium (Se) from poor quality soils. Soil microorganisms may play a vital role in sustaining health of soil and/or tolerance of these trees grown in poor quality soils by contributing to nutrient cycling, soil structure, overall soil quality, and plant survival. The effect of naturally occurring salts boron (B) and Se on soil microbial community composition associated with poplar trees is not known for bioremediation strategies. In this study, three Populus clones 13-366, 345-1, and 347-14 were grown in spring 2006 under highly saline, B, and Se clay-like soils in the west side of the San Joaquin Valley (SJV) of CA, as well as in non-saline sandy loam soils located in the east side of the SJV. After 7 years of growing in the respective soils of different qualities, soil samples were collected from poplar clones grown in saline and non-saline soils to examine and compare soil quality effects on soil microbial community biomass and composition. The phospholipid fatty acid (PLFA) analysis was used to characterize microbial community composition in soils from trees grown at both locations. This study showed that microbial biomass and the amount and proportion of arbuscular mycorrhizal fungal (AMF) community were lower in all three poplar clones grown in saline soil compared to non-saline soil. Amounts of Gram + bacterial and actinomycetes PLFAs were significantly lower in poplar clone 13-366 grown in saline soil compared to non-saline soil; however, they did not differ significantly in poplar clones 347-14 and 345-1. Additionally, amounts of saprophytic fungal, Gram - bacterial and eukaryotic PLFA remained similar at saline and non-saline sites under poplar clones 347-14, 345-1, and 13-366. Therefore, this study suggested that salinity and B do have an impact on microbial biomass and AMF; however, these poplar clones still recycled sufficient amount of nutrients to support and protect saprophytic fungal and bacterial communities from the effects of poor quality soils.

Continued Selenium Biofortification of Carrots and Broccoli Grown in Soils Once Amended with Se-enriched S. pinnata.

Selenium (Se) biofortification has been practiced in Se-deficient regions throughout the world primarily by adding inorganic sources of Se to the soil. Considering the use of adding organic sources of Se could be useful as an alternative Se amendment for the production of Se-biofortified food crops. In this multi-year micro-plot study, we investigate growing carrots and broccoli in soils that had been previously amended with Se-enriched Stanleya pinnata Pursh (Britton) three and 4 years prior to planting one and two, respectively. Results showed that total and extractable Se concentrations in soils (0-30 cm) were 1.65 mg kg(-1) and 88 µg L(-1), and 0.92 mg kg(-1) and 48.6 µg L(-1) at the beginning of the growing season for planting one and two, respectively. After each respective growing season, total Se concentrations in the broccoli florets and carrots ranged from 6.99 to 7.83 mg kg(-1) and 3.15 to 6.25 mg kg(-1) in planting one and two, respectively. In broccoli and carrot plant tissues, SeMet (selenomethionine) was the predominant selenoamino acid identified in Se aqueous extracts. In postharvest soils from planting one, phospholipid fatty acid (PLFA) analyses showed that amending the soil with S. pinnata exerted no effect on the microbial biomass, AMF (arbuscular mycorrhizal fungi), actinomycetes and Gram-positive and bacterial PLFA at both 0-5 and 0-30 cm, respectively, 3 years later. Successfully producing Se-enriched broccoli and carrots 3 and 4 years later after amending soil with Se-enriched S. pinnata clearly demonstrates its potential source as an organic Se enriched fertilizer for Se-deficient regions.