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1.
ACS Omega ; 7(36): 32225-32237, 2022 Sep 13.
Artigo em Inglês | MEDLINE | ID: mdl-36120068

RESUMO

Peculiar physicochemical properties of two-dimensional (2D) nanomaterials have attracted research interest in developing new synthetic technology and exploring their potential applications in the field of catalysis. Moreover, ultrathin metal oxide nanosheets with atomic thickness exhibit abnormal surficial properties because of the unique 2D confinement effect. In this work, we present a facile and general approach for the synthesis of single crystalline and ultrathin 2D nanosheets assembly of scrutinyite-SnO2 through a simple solvothermal method. The structural and compositional characterization using X-ray diffraction (Rietveld refinement analysis), high-resolution transmission electron microscopy, atomic force microscopy, X-ray photoelectron spectroscopy, and so on reveal that the as-synthesized 2D nanosheets are ultrathin and single crystallized in the scrutinyite-SnO2 phase with high purity. The ultrathin SnO2 nanosheets show predominant growth in the [011] direction on the main surface having a thickness of ca. 1.3 nm. The SnO2 nanosheets are further employed for the regioselective Friedel-Crafts acylation to synthesize aromatic ketones that have potential significance in chemical industry as synthetic intermediates of pharmaceuticals and fine chemicals. A series of aromatic substrates acylated over the SnO2 nanosheets have afforded the corresponding aromatic ketones with up to 92% yield under solvent-free conditions. Comprehensive catalytic investigations display the SnO2 nanosheet assembly as a better catalytic material compared to the heterogeneous metal oxide catalysts used so far in the view of its activity and reusability in solvent-free reaction conditions.

2.
J Mol Evol ; 90(1): 114-123, 2022 02.
Artigo em Inglês | MEDLINE | ID: mdl-35084523

RESUMO

Transversion and transition mutations have variable effects on the stability of RNA secondary structure considering that the former destabilizes the double helix geometry to a greater extent by introducing purine:purine (R:R) or pyrimidine:pyrimidine (Y:Y) base pairs. Therefore, transversion frequency is likely to be lower than that of transition in the secondary structure regions of RNA genes. Here, we performed an analysis of transition and transversion frequencies in tRNA genes defined well with secondary structure and compared with the intergenic regions in five bacterial species namely Escherichia coli, Klebsiella pneumoniae, Salmonella enterica, Staphylococcus aureus and Streptococcus pneumoniae using a large genome sequence data set. In general, the transversion frequency was observed to be lower than that of transition in both tRNA genes and intergenic regions. The transition to transversion ratio was observed to be greater in tRNA genes than that in the intergenic regions in all the five bacteria that we studied. Interestingly, the intraspecies base substitution analysis in tRNA genes revealed that non-compensatory substitutions were more frequent than compensatory substitutions in the stem region. Further, transition to transversion ratio in the loop region was observed to be significantly lesser than that among the non-compensatory substitutions in the stem region. This indicated that the transversion is more deleterious than transition in the stem regions. In addition, substitutions from amino bases (A/C) to keto bases (G/T) were also observed to be more than the reverse substitutions in the stem region. Substitution from amino bases to keto bases are likely to facilitate the stable G:U pairing unlike the reverse substitution that facilitates the unstable A:C pairing in the stem region of tRNA. This work provides additional support that the secondary structure of tRNA molecule is what drives the different substitutions in its gene sequence.


Assuntos
Escherichia coli , RNA de Transferência , Sequência de Bases , DNA Intergênico , Escherichia coli/genética , Conformação de Ácido Nucleico , Purinas , Pirimidinas , RNA de Transferência/genética
3.
J Mol Graph Model ; 107: 107945, 2021 09.
Artigo em Inglês | MEDLINE | ID: mdl-34102527

RESUMO

In the present study, five novel LNA based antisense modifications have been proposed. A conformational search was carried out using TANGO, followed by geometry optimization using MOPAC. Based on their electronic energies the most stable conformation for each modification was identified. Further, DFT based full geometry optimization on the most stable conformations at the gas phase B3LYP/6-31G(d,p) using a Gaussian03 and single point energy calculations on the optimized structures at the solvent phase B3LYP/6-311G(d,p) level of theory were done to derive their quantum chemical descriptors using the Gaussian09. A comparison of global reactivity descriptors confirmed that the LNA based modifications were the most reactive. Base-pair stability was recorded by observing the binding energies and base-pairing conformations of modified GC base pairs at the B3LYP/6-311G(d,p) level of theory. Molecular dynamics simulations have been performed at the oligomer duplex level by incorporating individual modifications on 20-mer RNA-RNA duplexes using AMBER16. Free energy calculations of duplex structures suggested that incorporation of A2 modification into the RNA-RNA duplex increased the duplex binding affinity similar to LNA. Whereas, the A3 modification showed less binding compared to LNA but improved binding compared to MOE. This computational approach using quantum chemical methods may be very useful to propose better modifications than the existing ones before performing the experiments in the area of antisense technology.


Assuntos
Oligonucleotídeos , RNA , Teoria da Densidade Funcional , Conformação de Ácido Nucleico
4.
Curr Comput Aided Drug Des ; 17(1): 83-94, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-31899679

RESUMO

AIM AND OBJECTIVE: To evaluate a set of seventy phytochemicals for their potential ability to bind the inhibitor of nuclear factor kappaB kinase beta (IKK-ß) which is a prime target for cancer and inflammatory diseases. MATERIALS AND METHODS: Seventy phytochemicals were screened against IKK-ß enzyme using DFT-based molecular docking technique and the top docking hits were carried forward for molecular dynamics (MD) simulation protocols. The ADME-Toxicity analysis was also carried out for the top docking hits. RESULTS: Sesamin, matairesinol and resveratrol were found to be the top docking hits with a total score of -413 kJ/mol, -398.11 kJ/mol and 266.73 kJ/mol, respectively. Glu100 and Gly102 were found to be the most common interacting residues. The result from MD simulation observed a stable trajectory with a binding free energy of -107.62 kJ/mol for matairesinol, -120.37 kJ/mol for sesamin and -40.56 kJ/mol for resveratrol. The ADME-Toxicity prediction observed that these compounds fall within the permissible area of Boiled-Egg and it does not violate any rule for pharmacological criteria, drug-likeness etc. Conclusion: The study interprets that dietary phytochemicals are potent inhibitors of IKK-ß enzyme with favorable binding affinity and less toxic effects. In fact, there is a gradual rise in the use of plant-derived molecules because of its lesser side effects compared to chemotherapy. The study has also provided an insight by which the phytochemicals inhibited the IKK-ß enzyme. The investigation would also provide in understanding the inhibitory mode of certain dietary phytochemicals in treating cancer.


Assuntos
Desenho de Fármacos , Quinase I-kappa B/antagonistas & inibidores , Compostos Fitoquímicos/farmacologia , Inibidores de Proteínas Quinases/farmacologia , Antineoplásicos Fitogênicos/farmacologia , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular
5.
J Nat Prod ; 81(11): 2521-2530, 2018 11 26.
Artigo em Inglês | MEDLINE | ID: mdl-30406661

RESUMO

Inhibitors of thrombin, a key enzyme in the blood coagulation cascade, are of great interest because of their selective specificity and effectiveness in anticoagulation therapy against cardiovascular disorders. The natural soybean phytosterol, ß-sitosterol (BSS) demonstrated anticoagulant activity by dose-dependent inhibition of thrombin in an uncompetitive manner with a Ki value of 0.267 µM as well as by partial inhibition of thrombin-catalyzed platelet aggregation with a half-maximal inhibitory concentration (IC50) value of 10.45 ± 2.88 µM against platelet-rich plasma and 9.2 ± 1.2 µM against washed platelets. An in silico study indicated binding of BSS to thrombin, which was experimentally verified by spectrofluorometric and isothermal calorimetric analyses. Under in vitro conditions, BSS demonstrated thrombolytic activity by activating plasminogen, albeit it is devoid of protease (fibrinogenolytic) activity. BSS was noncytotoxic to mammalian cells, nonhemolytic, demonstrated its in vivo anticoagulant activity when administered orally, and inhibited k-carrageen-induced thrombus formation in the tails of mice. Our results suggest that dietary supplementation of BSS may help to prevent thrombosis-associated cardiovascular disorders.


Assuntos
Anticoagulantes/farmacologia , Antitrombinas/farmacologia , Plantas/química , Sitosteroides/farmacologia , Trombose/prevenção & controle , Animais , Catálise , Modelos Animais de Doenças , Feminino , Fibrinogênio/metabolismo , Humanos , Masculino , Camundongos , Inibidores da Agregação Plaquetária/farmacologia , Trombina/metabolismo
6.
ACS Omega ; 3(6): 7086-7095, 2018 Jun 30.
Artigo em Inglês | MEDLINE | ID: mdl-31458870

RESUMO

A series of potassium salt-loaded MgAl hydrotalcites were synthesized by wet impregnation of KNO3, KF, KOH, K2CO3, and KHCO3 salts over calcined MgAl hydrotalcite (Mg-Al = 3:1). The samples were characterized by X-ray diffraction, Fourier transform infrared, thermogravimetry-differential thermal analysis, scanning electron microscopy, and N2 absorption-desorption techniques to investigate their structural properties. The results showed formation of well-developed hydrotalcite phase and reconstruction of layered structure after impregnation. The prepared hydrotalcites possess mesopores and micropores having pore diameters in the range of 3.3-4.0 nm and Brunauer-Emmett-Teller surface area 90-207 m2 g-1. Base strengths calculated from Hammett indicator method were found increasing after loading salts, where KOH-loaded hydrotalcite showed base strength in the range of 12.7 < H- < 15, which was found to be the preferred catalyst. Subsequently, KOH loading was increased from 10 to 40% (w/w) and catalytic activity was evaluated for the Knoevenagel condensation reaction at room temperature. Density functional theory calculations show that among all of the oxygen atoms present in the hydrotalcite, the O atom attached to the K atom has the highest basic character. In this study, 10% KOH-loaded hydrotalcite showing 99% conversion and 100% selectivity was selected as the preferred catalyst in terms of base strength, stability, and catalytic efficiency.

7.
Artigo em Inglês | MEDLINE | ID: mdl-24653653

RESUMO

BACKGROUND: Laryngopharyngeal reflux disease can present with a varied symptomatology because of the involvement of multiple sub-sites of the upper aero-digestive tract. It is a very common disease to be encountered in routine practice by both medical and ENT personnel. Its association with multiple pathologies including malignancy warrants an early diagnosis and management. The lack of cost effective and non-invasive tests constitutes a major hurdle in its early management. OBJECTIVES: 1. To define the "at risk" population, prone to developing laryngopharyngeal reflux. 2. To formulate major and minor risk factors for the clinical diagnosis of patients with laryngopharyngeal reflux. 3. To evaluate the efficacy of lifestyle management alone as a treatment option. 4. To formulate a treatment protocol for the management of patients and to prevent recurrence. STUDY DESIGN: We performed a prospective analysis of 234 patients diagnosed with laryngopharyngeal reflux. Patients were randomized into study and control groups based on the treatment protocol, using a computer generated randomization table and were single blinded to the type of therapy received. A complete analysis of the possible risk factors, symptoms, and signs was performed with statistical analysis. RESULTS AND CONCLUSION: The data has helped us define the "at risk" population and formulate the criteria to diagnose cases of laryngopharyngeal reflux, clinically. The results emphasize the non-requirement of invasive or costly investigations for all patients and indicate the probable protocol to be followed prior to considering further investigation. The role of long term proton pump inhibitor treatment along with lifestyle modification in the initial phase of treatment, as mentioned in the literature, was re-confirmed by our study. However, in addition to the initial treatment, the study establishes the need for continuing lifestyle modification further for at least six months after the cessation of proton pump inhibitor therapy to prevent early recurrence of symptoms.

8.
Artigo em Inglês | MEDLINE | ID: mdl-24468984

RESUMO

Single molecule acting as both fluorescent and electrochemical sensor for Zn(2+) ion is rare. The product (L) obtained on condensation between benzil and L-tryptophan has been characterized by H NMR, ESI-MS and FT-IR spectroscopy. L in 1:1 (v/v) CH3OH:H2O solution shows fluorescence emission in the range 300 nm to 600 nm with λmax at 350 nm when is excited with 295 nm photon. Zn(2+) ion could induce a 10-fold enhancement in fluorescent intensity of L. Fluorescence and UV/Visible spectral data analysis shows that the binding ratio between Zn(2+) ion and L is 1:1 with log ß=4.55. Binding of Zn(2+) ion disrupts the photoinduced electron transfer (PET) process in L and causes the fluorescence intensity enhancement. When cyclic voltammogram is recorded for L in 1:1 (v/v) CH3OH:H2O using glassy carbon (GC) electrode, two quasi reversible redox couples at redox potential values -0.630±0.005 V and -1.007±0.005 V are obtained (Ag-AgCl as reference, scan rate 0.1 V s(-1)). Interaction with Zn(2+) ion makes the first redox couple irreversible while the second couple undergoes a 0.089 V positive shift in redox potential. Metal ions - Cd(2+), Cu(2+), Co(2+), Hg(2+), Ag(+), Ni(2+), Fe(2+), Mn(2+), Mg(2+), Ca(2+)and Pb(2+), individually or all together, has no effect on the fluorescent as well as electrochemical property of L. DFT calculations showed that Zn(2+) ion binds to L to form a stable complex. The detection limit for both fluorescence as well as electrochemical detection was 10(-6) M.


Assuntos
Técnicas Eletroquímicas/métodos , Fenilglioxal/análogos & derivados , Bases de Schiff/química , Triptofano/química , Zinco/química , Concentração de Íons de Hidrogênio , Íons , Modelos Moleculares , Fenilglioxal/química , Teoria Quântica , Padrões de Referência , Soluções , Espectrometria de Fluorescência , Espectrofotometria Ultravioleta
9.
Curr Pharm Des ; 20(27): 4455-73, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24245759

RESUMO

Tuberculosis caused by Mycobacterium tuberculosis is an infectious bacterial disease which is a leading cause of mortality affecting more than 9 million people worldwide. The current standard regimens that are available for the treatment of TB are severely hampered due to the occurrence of multidrug-resistant (MDR-TB) and extensively drug-resistant (XDR-TB) strains of Mycobacterium tuberculosis. In the past few years, a huge and constantly expanding effort has been developed to understand the chemical-biological interaction of many new anti-tubercular drugs and their targets in mathematical terms. Here, we have elected to review only those studies concerning 2D and 3D QSAR models that contain different DFT based descriptors as their parameters.


Assuntos
Antituberculosos/química , Descoberta de Drogas/métodos , Modelos Teóricos , Mycobacterium tuberculosis/efeitos dos fármacos , Tuberculose Resistente a Múltiplos Medicamentos/tratamento farmacológico , Antituberculosos/farmacologia , Antituberculosos/uso terapêutico , Tuberculose Extensivamente Resistente a Medicamentos/tratamento farmacológico , Tuberculose Extensivamente Resistente a Medicamentos/microbiologia , Humanos , Estrutura Molecular , Relação Quantitativa Estrutura-Atividade , Tuberculose Resistente a Múltiplos Medicamentos/microbiologia
10.
Chempluschem ; 79(3): 427-438, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-31986616

RESUMO

Emerging trends in recyclable homogeneous chiral catalysts and their application in asymmetric synthesis are prompting a renewed interest in the field of catalysis as well as in industry. However, owing to fatal disadvantages of the homogeneous catalyst, they are not easily recoverable and recyclable. Herein, a comparison is made of the recyclability and stability of a homogeneous chiral CuII Schiff base complex of general formula CuL, in which L=C22 H24 N2 O4 , with that of a zeolite-Y-confined heterogeneous catalyst. On the basis of our experimental evidence, we demonstrate how self-decomposition and bimetallic formation disrupt the catalytic activity of a homogeneous catalyst. By exploiting the special structure of faujasite zeolite, self-decomposition of the chiral catalyst is fully controlled and efficiently used for the asymmetric nitroaldol reaction. The use of ionic liquid results in catalytic enhancement and provides a convenient way to recycle the homogeneous catalyst up to three cycles. When encapsulated in a cavity of faujasite by means of the "ship-in-a-bottle" synthesis method, it shows much better catalytic activity with enhanced enantioselectivity, recyclability, and stability. The heterogeneous catalyst is recycled up to nine cycles and retains the catalytic activity for a longer period of time relative to its homogeneous counterpart. The synthesized heterogeneous CuII complex provides the nitroaldol product with a maximum of 84 % yield and 87 % enantiomeric excess (ee; R isomer). Structural and reactivity differences between the homogeneous and heterogeneous chiral complexes are substantiated by density functional theory (DFT) calculations.

11.
J Comput Aided Mol Des ; 27(9): 807-21, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-24132695

RESUMO

The application of graphene and related nanomaterials like boron nitride (BN) nanosheets, BN-graphene hybrid nanomaterials, and graphene oxide (GO) for adsorption of anticancer chemotherapeutic camptothecin (CPT) along with the effect on electronic properties prior to functionalization and after functionalization has been reported using density functional theory (DFT) calculations. The inclusion of dispersion correction to DFT is instrumental in accounting for van der Waals π-π stacking between CPT and the nanomaterial. The adsorption of CPT exhibits significant strain within the nanosheets and noncovalent adsorption of CPT is thermodynamically favoured onto the nanosheets. In case of GO, surface incorporation of functional groups result in significant crumpling along the basal plane and the interaction is basically mediated by H-bonding rather than π-π stacking. Docking studies predict the plausible binding of CPT, CPT functionalized graphene and GO with topoisomerase I (top 1) signifying that CPT interacts through π stacking with AT and GC base pairs of DNA and in presence of nano support, DNA bases preferentially gets bound to the basal plane of graphene and GO rather than the edges. At a theoretical level of understanding, our studies point out the noncovalent interaction of CPT with graphene based nanomaterials and GO for loading and delivery of anticancer chemotherapeutic along with active binding to Top1 protein.


Assuntos
Camptotecina/química , Camptotecina/metabolismo , DNA Topoisomerases Tipo I/metabolismo , Grafite/química , Grafite/metabolismo , Nanoestruturas/química , Adsorção , Simulação por Computador , DNA/química , DNA/metabolismo , DNA Topoisomerases Tipo I/química , Humanos , Ligação de Hidrogênio , Modelos Químicos , Conformação Proteica , Propriedades de Superfície , Termodinâmica , Inibidores da Topoisomerase I/química , Inibidores da Topoisomerase I/metabolismo
12.
Inorg Chem ; 52(19): 10897-903, 2013 Oct 07.
Artigo em Inglês | MEDLINE | ID: mdl-24059697

RESUMO

Copper(II) complex, 1, with the histidine-derived ligand L (L = methyl 2-(2-hydroxybenzylamino)-3-(1H-imidazol-5-yl)propanoate) has been synthesized and characterized. Single-crystal structure determination reveals a diphenolato-bridged dicopper(II) core in 1. Addition of (•)NO to an acetonitrile solution of 1 affords the corresponding mononuclear copper(II)-nitrosyl complex, 2. In the presence of H2O2, 2 results in formation of the corresponding copper(I)-peroxynitrite. Formation of peroxynitrite ((-)OONO) intermediate is evident from its characteristic phenol ring nitration reaction which resembles the tyrosine nitration in biological systems. Further, isolation of nitrate (NO3(-)) as the decomposition product from 2 at room temperature also supports the involvement of (-)OONO intermediate.


Assuntos
Complexos de Coordenação/química , Cobre/química , Peróxido de Hidrogênio/química , Óxidos de Nitrogênio/química , Ácido Peroxinitroso/química , Fenol/química , Teoria Quântica , Cristalografia por Raios X , Ligantes , Modelos Moleculares , Nitratos/química , Espectroscopia de Infravermelho com Transformada de Fourier
13.
Inorg Chem ; 52(14): 8017-29, 2013 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-23848182

RESUMO

Two chiral Schiff-base complexes of copper(II) have been successfully encapsulated inside the cavity of zeolite-NaY via a "ship in a bottle" synthesis method. The presence of the two complexes inside the cages of zeolite-Y has been confirmed based on various spectrochemical and physicochemical techniques, viz. FTIR, UV-vis/DRS, ESR, XPS, CV, EDX, SEM, and TGA. Zeolite-encapsulated chiral copper(II) Schiff-base complexes are found to give a high-enantioselective (84% ee, R conformation) nitro-aldol product at -20 °C. The encapsulated copper complexes are found to show higher catalytic efficiency than their homogeneous counterparts under identical conditions. Density functional theory (DFT) calculation has been implemented to understand the effect of the zeolite matrix on structural, electronic, and reactivity properties of the synthesized complexes. Theoretical calculation predicts that upon encapsulation into the zeolite matrix the Cu center becomes more susceptible to nucleophilic attack, favoring a nitro-aldol reaction. A plausible mechanism is suggested based on the experimental and theoretical results. The structures of reaction intermediates and transition state(s) involved in the catalytic cycle are derived using DFT.

14.
J Comput Aided Mol Des ; 27(3): 257-76, 2013 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-23413106

RESUMO

The potential biomedical application of carbon nanotubes (CNTs) pertinent to drug delivery is highly manifested considering the remarkable electronic and structural properties exhibited by CNT. To simulate the interaction of nanomaterials with biomolecular systems, we have performed density functional calculations on the interaction of pyrazinamide (PZA) drug with functionalized single-wall CNT (fSWCNT) as a function of nanotube chirality and length using two different approaches of covalent functionalization, followed by docking simulation of fSWCNT with pncA protein. The functionalization of pristine SWCNT facilitates in enhancing the reactivity of the nanotubes and formation of such type of nanotube-drug conjugate is thermodynamically feasible. Docking studies predict the plausible binding mechanism and suggests that PZA loaded fSWCNT facilitates in the target specific binding of PZA within the protein following a lock and key mechanism. Interestingly, no major structural deformation in the protein was observed after binding with CNT and the interaction between ligand and receptor is mainly hydrophobic in nature. We anticipate that these findings may provide new routes towards the drug delivery mechanism by CNTs with long term practical implications in tuberculosis chemotherapy.


Assuntos
Amidoidrolases/metabolismo , Antituberculosos/administração & dosagem , Portadores de Fármacos/química , Mycobacterium tuberculosis/enzimologia , Nanotubos de Carbono/química , Pirazinamida/administração & dosagem , Amidoidrolases/química , Antituberculosos/química , Antituberculosos/farmacologia , Cristalografia por Raios X , Humanos , Simulação de Acoplamento Molecular , Mycobacterium tuberculosis/química , Mycobacterium tuberculosis/efeitos dos fármacos , Conformação Proteica , Pirazinamida/química , Pirazinamida/farmacologia , Tuberculose/tratamento farmacológico
15.
J Mol Model ; 19(1): 215-26, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22864625

RESUMO

The current study explores a new strategy to incorporate single wall carbon nanotubes (SWNTs)/doped SWNTs as carrier modules in target-specific administration of antitubercular chemotherapeutics through covalent and noncovalent functionalization onto the nanotube sidewall. Density functional studies illustrate that noncovalent functionalization of isoniazid (INH) is preferred over covalent attachment, exhibiting low adsorption energy values, HOMO-LUMO gap and comparison of quantum molecular descriptors performed in (5,5) and (9,0) SWNT systems. Substitution doping of boron facilitates the adsorption of INH onto the otherwise inert nanotube. Frontier orbital analysis reveals reorientation of electronic charge in the nanotubes after functionalization, the effect being more pronounced in the case of doped nanotubes. The charge transfer is significant in covalent functionalization of INH via the B-dopant atom, whereas in noncovalent functionalization a small amount of charge transfer is noted. Solvation studies demonstrate the dissolution of INH in B-doped (5,5) and (9,0) SWNTs to be higher compared to pristine nanotube-INH complexes. Functionalization of nanotubes via covalent and noncovalent means can foster pioneering prospects especially for experimental studies in this area of research.


Assuntos
Isoniazida/química , Modelos Moleculares , Nanotubos de Carbono/química , Teoria Quântica , Adsorção , Elétrons , Conformação Molecular , Termodinâmica
16.
Dalton Trans ; 41(31): 9543-52, 2012 Aug 21.
Artigo em Inglês | MEDLINE | ID: mdl-22763643

RESUMO

Three copper(II) complexes, 1, 2, and 3 with L(1), L(2) and L(3) [L(1) = 2-(2-aminoethyl)-pyridine; L(2) = 2-(N-ethyl-2-aminoethyl)-pyridine; L(3) = 3,3'-iminobis(N,N-dimethylpropylamine)], respectively, were synthesized and characterized. Addition of nitric oxide gas to the degassed acetonitrile solution of the complexes were found to result in the reduction of the copper(II) center to copper(I). In cases of complexes 1 and 2, the formation of the [Cu(II)-NO] intermediate prior to the reduction of Cu(II) was evidenced by UV-visible, solution FT-IR and X-band EPR spectroscopic studies. However, for complex 3, the formation of [Cu(II)-NO] has not been observed. DFT calculations on the [Cu(II)-NO] intermediate generated from complex 1 suggest a distorted square pyramidal geometry with the NO ligand coordinated to the Cu(II) center at an equatorial site in a bent geometry. In the case of complex 1, the reduction of the copper(II) center by nitric oxide afforded ligand transformation through diazotization at the primary amine site in acetonitrile solution; whereas, in an acetonitrile-water mixture, it resulted in 2-(pyridine-2-yl)ethanol. On the other hand, in cases of complexes 2 and 3, it was found to yield N-nitrosation at the secondary amine site in the ligand frameworks. The final organic products, in each case, were isolated and characterized by various spectroscopic studies.


Assuntos
Complexos de Coordenação/química , Cobre/química , Óxido Nítrico/química , Acetonitrilas/química , Aminas/química , Ligantes , Piridinas/química
17.
Inorg Chem ; 51(3): 1657-74, 2012 Feb 06.
Artigo em Inglês | MEDLINE | ID: mdl-22256783

RESUMO

Iron(III) Schiff-base complexes of general formula [Fe(L)(2)Cl]·2H(2)O, where L = N,N-bis(salicylidene)ethylenediamine and N,N-disalicylidene-1,2-phenylenediamine have been encapsulated within various alkali exchanged zeolites viz. LiY, NaY, and KY by flexible ligand method. The encapsulated complexes are characterized by EDX, scanning electron microscopy (SEM), powder X-ray diffraction (XRD), FT-IR, UV-vis, diffuse reflectance spectroscopy (DRS), electron spin resonance spectroscopy (ESR) and cyclic voltammetry studies. The diffuse reflectance UV-vis spectra of encapsulated complexes show a dramatic red shift of the charge transfer band with increasing electropositivity of the exchangeable cations. The electrochemical analysis predicts the shifting of the reduction potential toward negative values with increasing size of the alkali exchanged cations. The zeolite encapsulated Schiff-base complexes of iron are found to be catalytically active toward the oxidative coupling of 2-napthol. Metal complexes incorporated in potassium exchanged zeolite-Y are found to be more effective for catalytic conversion of 2-naphthol to binaphthol and induces higher selectivity toward the R-conformation. The catalytic conversion of 2-napthol to BINOL is found to depend on the reduction potential of the catalyst, with a more negative reduction potential being better for the catalytic conversion. Density functional calculation is being carried out on both the neat Fe-Salen and Fe-Salophen complexes and those encapsulated in NaY zeolite to investigate change in structural parameters, energies of the HOMO and LUMO, and global hardness and softness. Fukui functions, as local descriptors, are used to analyze the hard-hard interaction at a particular site of the complexes.

18.
Chem Commun (Camb) ; 48(9): 1251-3, 2012 Jan 30.
Artigo em Inglês | MEDLINE | ID: mdl-22158974

RESUMO

Copper(II) complex, 1, of the bidentate ligand, L [L = bis(2-ethyl-4-methyl-imidazol-5yl)methane] has been synthesized and structurally characterized. Addition of nitric oxide gas to a degassed acetonitrile solution of 1 yielded the corresponding copper(ii)-nitrosyl complex, 2. In acetonitrile, complex 2 on reaction with water afforded the corresponding copper(I)-nitrite complex, 3. Single crystal structure of complex 3 reveals the bidentate nitrite (η(2)-O,O) bonding. This is the first example of a structurally characterized Cu(I)-(η(2)-O,O)nitrite complex with N-donor ligand. The sequence of the formation of these complexes is just the reverse of the key steps of the postulated nitrite reduction cycle by CuNiRs.


Assuntos
Cobre/química , Nitritos/química , Compostos Nitrosos/química , Compostos Organometálicos/química , Ligantes , Modelos Moleculares , Óxido Nítrico/química , Nitritos/síntese química , Compostos Nitrosos/síntese química , Compostos Organometálicos/síntese química
19.
Chem Biol Drug Des ; 79(4): 553-9, 2012 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-22151277

RESUMO

In this study, antimycobacterial activity of a set of synthesized chalcone derivatives against Mycobacterium tuberculosis H37Rv was investigated by quantitative structure-activity relationship (QSAR) analysis using density functional theory (DFT) and molecular mechanics (MM+)-based descriptors in both gas and solvent phases. The best molecular descriptors identified were hardness, E(HOMO) , MR(A-4) and MR(B-4') that contributed to the antimycobacterial activity of the chalcones as independent factors. The correlation of these four descriptors with their antimycobacterial activity increases with the inclusion of solvent medium, indicating their importance in studying biological activity. QSAR models revealed that in gas phase, lower values of E(HOMO) , MR(A-4) and MR(B-4') increase the antimycobacterial activity of the chalcone molecules. However, in solvent phase, lower values of E(HOMO) and MR(B-4') and higher values of MR(A-4) increase their activity.


Assuntos
Antibióticos Antituberculose/química , Antibióticos Antituberculose/farmacologia , Chalconas/química , Chalconas/farmacologia , Mycobacterium tuberculosis/efeitos dos fármacos , Humanos , Testes de Sensibilidade Microbiana , Relação Quantitativa Estrutura-Atividade , Tuberculose/tratamento farmacológico
20.
Inorg Chem ; 50(23): 11868-76, 2011 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-22040303

RESUMO

The nitric oxide reactivity of two copper(II) complexes, 1 and 2 with ligands L(1) and L(2), respectively, [L(1) = 5,5,7,12,12,14-hexamethyl-1,4,8,11-tetraazacyclotetradecane, L(2) = 5,5,7-trimethyl-[1,4]-diazepane] have been studied. The copper(II) center in complex 1 was found to be unreactive toward nitric oxide in pure acetonitrile; however, it displayed reduction in methanol solvent in presence of base. The copper(II) center in 2, in acetonitrile solvent, on exposure to nitric oxide has been found to be reduced to copper(I). The same reduction was observed in methanol, also, in case of complex 2. In case of complex 1, presumably, the attack of nitric oxide on the deprotonated amine is the first step, followed by electron transfer to the copper(II) center to afford the reduction. Alternatively, first NO coordination to the Cu(II) followed by NO(+) migration to the secondary amine is the most probable in case of complex 2. The observation of the transient intermediate in UV-visible and FT-IR spectroscopy prior to reduction in case of complex 2 also supports this possibility. In both cases, the reduction resulted into N-nitrosation; in 1, only mononitrosation was observed whereas complex 2 afforded dinitrosation as major product along with a minor amount of mononitrosation. Thus, it is evident from the present study that the macrocyclic ligands prefer the deprotonation pathway leading to mononitrosation; whereas nonmacrocyclic ones prefer the [Cu(II)-NO] intermediate pathway resulting into nitrosation at all the available sites of the ligand as major product.


Assuntos
Cobre/química , Óxido Nítrico/química , Compostos Nitrosos/química , Compostos Organometálicos/química , Aminas/química , Compostos Heterocíclicos/química , Ligantes , Oxirredução
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