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1.
J Biotechnol ; 189: 27-35, 2014 Nov 10.
Artigo em Inglês | MEDLINE | ID: mdl-25179874

RESUMO

Gluconobacter strains are specialized in the incomplete oxidation of monosaccharides. In contrast, growth and product formation from disaccharides is either very low or impossible. A pathway that allows growth on trehalose was rationally designed to broaden the substrate range of Gluconobacter oxydans. Expression vectors containing different signal sequences and the gene encoding alkaline phosphatase, phoA, from Escherichia coli were constructed. The signal peptide that exhibited the strongest periplasmic PhoA activity was used to generate a G. oxydans strain able to utilize the model disaccharide trehalose as a carbon and energy source by expressing the periplasmic trehalase TreA from E. coli. The strain had a doubling time of 3.7h and reached a final optical density of 1.7 when trehalose was used as a growth substrate. In comparison, the wild-type harboring the empty vector and the strain expressing treA without a signal sequence grew slowly to a final OD of only 0.15. The trehalose concentration in treA expressing cultures decreased continuously during the exponential growth phase indicating that the substrate was hydrolyzed to glucose by TreA. In contrast to the wild-type growing on glucose, the treA expression strain mainly formed acetate and 5-ketogluconate as end products rather than gluconate.


Assuntos
Gluconobacter oxydans/metabolismo , Trealase/metabolismo , Trealose/metabolismo , Ácido Acético/metabolismo , Genes Bacterianos , Sinais Direcionadores de Proteínas/fisiologia
2.
Appl Microbiol Biotechnol ; 60(3): 233-42, 2002 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-12436304

RESUMO

The genus Gluconobacter belongs to the group of acetic acid bacteria, which are characterized by their ability to incompletely oxidize a wide range of carbohydrates and alcohols. The corresponding products (aldehydes, ketones and organic acids) are excreted almost completely into the medium. In most cases, the reactions are catalyzed by dehydrogenases connected to the respiratory chain. Since the reactive centers of the enzymes are oriented towards the periplasmic space, transport of substrates and products into, and out of, the cell is not necessary. Thus, rapid accumulation of incompletely oxidized products in the medium is facilitated. These organisms are able to grow in highly concentrated sugar solutions and at low pH-values. High oxidation rates correlate with low biomass production, which makes Gluconobacter strains interesting organisms for industrial applications. Modern fermentation processes, such as the production of L-sorbose (vitamin C synthesis) and 6-amino- L-sorbose (synthesis of the antidiabetic drug miglitol) are carried out with members of this genus. Other important products are dihydroxyacetone, gluconate and ketogluconates. The bacteria belonging to the genus Gluconobacter exhibit extraordinary uniqueness not only in their biochemistry but also in their growth behavior and response to extreme culture conditions. This uniqueness makes them ideal organisms for microbial process development.


Assuntos
Biotecnologia , Gluconobacter/metabolismo , Glucosamina/análogos & derivados , 1-Desoxinojirimicina/metabolismo , Ácido Acético/metabolismo , Ácido Ascórbico/metabolismo , Metabolismo dos Carboidratos , Genoma Bacteriano , Gluconatos/metabolismo , Gluconobacter/genética , Glucosamina/metabolismo , Concentração de Íons de Hidrogênio , Imino Piranoses
3.
Cell Mol Life Sci ; 59(9): 1513-33, 2002 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-12440773

RESUMO

Methanogenic archaea of the genus Methanosarcina are able to utilize H2 + CO2, methylated C1 compounds or acetate as energy and carbon source, thereby producing methane as the major end product. The methanogenic pathways lead to the formation of a mixed disulfide derived from coenzyme M and coenzyme B. This disulfide is of major importance for methanogens because it is the terminal electron acceptor of a branched respiratory chain. Molecular hydrogen, reduced coenzyme F420 or reduced ferredoxin are used as electron donors. Four enzymes are involved in the membrane-bound electron transport system of Methanosarcina species, all of which are involved in the generation of an electrochemical proton gradient that is used for ATP synthesis. This review focuses on the membrane-bound electron transport chains of Methanosarcina species with respect to the biochemical and genetic characteristics of the unusual energy transducing enzymes. Furthermore, the review addresses questions concerning the relationship between methanogenic proteins and components of respiratory chains found in bacteria and eukarya.


Assuntos
Transporte de Elétrons/fisiologia , Methanosarcina/enzimologia , Prótons , Sequência de Aminoácidos , Animais , Proteínas Arqueais/genética , Proteínas Arqueais/metabolismo , Dióxido de Carbono/metabolismo , Transporte de Íons , Proteínas de Membrana/genética , Proteínas de Membrana/metabolismo , Methanosarcina/genética , Dados de Sequência Molecular , Estrutura Molecular , Óperon/genética , Oxirredução , Oxirredutases/genética , Oxirredutases/metabolismo
4.
J Biol Chem ; 276(4): 2432-9, 2001 Jan 26.
Artigo em Inglês | MEDLINE | ID: mdl-11034998

RESUMO

Heterodisulfide reductase (HDR) is a component of the energy-conserving electron transfer system in methanogens. HDR catalyzes the two-electron reduction of coenzyme B-S-S-coenzyme M (CoB-S-S-CoM), the heterodisulfide product of the methyl-CoM reductase reaction, to free thiols, HS-CoB and HS-CoM. HDR from Methanosarcina thermophila contains two b-hemes and two [Fe(4)S(4)] clusters. The physiological electron donor for HDR appears to be methanophenazine (MPhen), a membrane-bound cofactor, which can be replaced by a water-soluble analog, 2-hydroxyphenazine (HPhen). This report describes the electron transfer pathway from reduced HPhen (HPhenH(2)) to CoB-S-S-CoM. Steady-state kinetic studies indicate a ping-pong mechanism for heterodisulfide reduction by HPhenH(2) with the following values: k(cat) = 74 s(-1) at 25 degrees C, K(m) (HPhenH(2)) = 92 microm, K(m) (CoB-S-S-CoM) = 144 microm. Rapid freeze-quench EPR and stopped-flow kinetic studies and inhibition experiments using CO and diphenylene iodonium indicate that only the low spin heme and the high potential FeS cluster are involved in CoB-S-S-CoM reduction by HPhenH(2). Fe-S cluster disruption by mersalyl acid inhibits heme reduction by HPhenH(2), suggesting that a 4Fe cluster is the initial electron acceptor from HPhenH(2). We propose the following electron transfer pathway: HPhenH(2) to the high potential 4Fe cluster, to the low potential heme, and finally, to CoB-S-S-CoM.


Assuntos
Proteínas Ferro-Enxofre/metabolismo , Methanosarcina/enzimologia , Oxirredutases/metabolismo , Fenazinas/metabolismo , Fosfotreonina/análogos & derivados , Monóxido de Carbono/farmacologia , Espectroscopia de Ressonância de Spin Eletrônica , Transporte de Elétrons , Análise de Injeção de Fluxo , Proteínas Ferro-Enxofre/efeitos dos fármacos , Mersalil/farmacologia , Mesna/metabolismo , Oniocompostos/farmacologia , Oxirredutases/efeitos dos fármacos , Fosfotreonina/metabolismo
5.
Eur J Biochem ; 267(18): 5810-4, 2000 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-10971593

RESUMO

The F420H2:quinone oxidoreductase from the sulfate-reducing archaeon Archaeoglobus fulgidus is encoded by the fqo gene cluster which comprises 11 genes (fqo J, K, M, L, N, A, BC, D, H, I, F). The last gene of the cluster, fqoF, was overexpressed in Escherichia coli. The purified subunit was able to oxidize reduced cofactor F420 using the electron-acceptor system methyl viologen plus metronidazole. The specific activity at 78 degrees C was 64 micromol F420H2 oxidized. min-1.(mg protein)-1. The purified polypeptide contained 10.6 mol non-heme iron, 7.2 mol acid-labile sulfur and 0.7 mol FAD per mol protein. With the exception of fqoF, the deduced amino-acid sequences of all other genes show homologies to distinct subunits of NADH-quinone oxidoreductases from prokaryotes and eukaryotes. Thus, it is concluded that the F420H2-dependent and the NADH-dependent enzyme are functional equivalents. Both proteins are the initial enzymes of membrane-bound electron-transport systems and are involved in energy conservation. In parallel with bacterial complex I, the F420H2:quinone oxidoreductase may be composed of three subcomplexes. FqoF functions as the input device adjusted to the oxidation of reduced cofactor F420H2, thereby replacing subunits of the input module of complex I that are not present in A. fulgidus. The subunits FqoB, FqoCD and FqoI may form the membrane-associated module and transfer electrons to the membrane-integral module. It is most likely that the last subcomplex is composed of FqoA, FqoH, FqoJ, FqoK, FqoL, FqoM and FqoN. All subunits are highly hydrophobic and are probably involved in the reduction of a special menaquinone with a fully reduced isoprenoid side chain present in the cytoplasmic membrane of A. fulgidus.


Assuntos
Archaeoglobus fulgidus/enzimologia , Quinona Redutases/química , Archaeoglobus fulgidus/genética , Elétrons , Eletroforese em Gel de Poliacrilamida , Flavinas/metabolismo , Modelos Biológicos , Modelos Químicos , NADH Desidrogenase/química , NADH Desidrogenase/genética , Ferroproteínas não Heme/metabolismo , Oxigênio/metabolismo , Plasmídeos/metabolismo , Quinona Redutases/genética , Quinona Redutases/isolamento & purificação , Análise de Sequência de DNA , Sulfatos/metabolismo , Enxofre/metabolismo
7.
J Biol Chem ; 275(24): 17968-73, 2000 Jun 16.
Artigo em Inglês | MEDLINE | ID: mdl-10751389

RESUMO

The F(420)H(2) dehydrogenase is part of the energy conserving electron transport system of the methanogenic archaeon Methanosarcina mazei Gö1. Here it is shown that cofactor F(420)H(2)-dependent reduction of 2-hydroxyphenazine as catalyzed by the membrane-bound enzyme is coupled to proton translocation across the cytoplasmic membrane, exhibiting a stoichiometry of 0.9 H(+) translocated per two electrons transferred. The electrochemical proton gradient thereby generated was shown to drive ATP synthesis from ADP + P(i). The gene cluster encoding the F(420)H(2) dehydrogenase of M. mazei Gö1 comprises 12 genes that are referred to as fpoA, B, C, D, H, I, J, K, L, M, N, and O. Analysis of the deduced amino acid sequences revealed that the enzyme is closely related to proton translocating NADH dehydrogenases of respiratory chains from bacteria (NDH-1) and eukarya (complex I). Like the NADH-dependent enzymes, the F(420)H(2) dehydrogenase is composed of three subcomplexes. The gene products FpoA, H, J, K, L, M, and N are highly hydrophobic and are homologous to subunits that form the membrane integral module of NDH-1. FpoB, C, D, and I have their counterparts in the amphipathic membrane-associated module of NDH-1. Homologues to the hydrophilic NADH-oxidizing input module are not present in M. mazei Gö1. Instead, the gene product FpoF may be responsible for F(420)H(2) oxidation and may function as the electron input part. Thus, the F(420)H(2) dehydrogenase from M. mazei Gö1 resembles eukaryotic and bacterial proton translocating NADH dehydrogenases in many ways. The enzyme from the methanogenic archaeon functions as a NDH-1/complex I homologue and is equipped with an alternative electron input unit for the oxidation of reduced cofactor F(420) and a modified output module adopted to the reduction of methanophenazine.


Assuntos
Methanosarcina/enzimologia , NADH Desidrogenase/metabolismo , Oxirredutases/genética , Oxirredutases/metabolismo , Trifosfato de Adenosina/biossíntese , Sequência de Bases , Clonagem Molecular , Transporte de Elétrons , Escherichia coli , Methanosarcina/genética , Dados de Sequência Molecular , Óperon , Regiões Promotoras Genéticas , Estrutura Secundária de Proteína
8.
FEBS Lett ; 457(3): 291-7, 1999 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-10471795

RESUMO

Methanogenic archaea of the order Methanosarcinales which utilize C(1) compounds such as methanol, methylamines or H(2)+CO(2), employ two novel membrane-bound electron transport systems generating an electrochemical proton gradient: the H(2):heterodisulfide oxidoreductase and the F(420)H(2):heterodisulfide oxidoreductase. The systems are composed of the heterodisulfide reductase and either a membrane-bound hydrogenase or a F(420)H(2) dehydrogenase which is functionally homologous to the proton-translocating NADH dehydrogenase. Cytochromes and the novel electron carrier methanophenazine are also involved. In addition, the methyl-H(4)MPT:HS-CoM methyltransferase is bioenergetically relevant. The enzyme couples methyl group transfer with the translocation of sodium ions and seems to be present in all methanogens. The proton-translocating systems with the participation of cytochromes and methanophenazine have been found so far only in the Methanosarcinales.


Assuntos
Euryarchaeota/metabolismo , Metiltransferases/metabolismo , Oxirredutases/metabolismo , Fenazinas/metabolismo , Citocromos/metabolismo , Metabolismo Energético , Euryarchaeota/química , Euryarchaeota/classificação , Metiltransferases/química , Oxirredução , Oxirredutases/química , Fenazinas/química
9.
J Bacteriol ; 181(13): 4076-80, 1999 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-10383977

RESUMO

The membrane-bound H2:heterodisulfide oxidoreductase system of the methanogenic archaeon Methanosarcina mazei Gö1 catalyzed the H2-dependent reduction of 2-hydroxyphenazine and the dihydro-2-hydroxyphenazine-dependent reduction of the heterodisulfide of HS-CoM and HS-CoB (CoM-S-S-CoB). Washed inverted vesicles of this organism were found to couple both processes with the transfer of protons across the cytoplasmic membrane. The maximal H+/2e- ratio was 0.9 for each reaction. The electrochemical proton gradient (DeltamicroH+) thereby generated was shown to drive ATP synthesis from ADP plus Pi, exhibiting stoichiometries of 0.25 ATP synthesized per two electrons transported for both partial reactions. ATP synthesis and the generation of DeltamicroH+ were abolished by the uncoupler 3,5-di-tert-butyl-4-hydroxybenzylidenemalononitrile (SF 6847). The ATP synthase inhibitor N,N'-dicyclohexylcarbodiimide did not affect H+ translocation but led to an almost complete inhibition of ATP synthesis and decreased the electron transport rates. The latter effect was relieved by the addition of SF 6847. Thus, the energy-conserving systems showed a stringent coupling which resembles the phenomenon of respiratory control. The results indicate that two different proton-translocating segments are present in the H2:heterodisulfide oxidoreductase system; the first involves the 2-hydroxyphenazine-dependent hydrogenase, and the second involves the heterodisulfide reductase.


Assuntos
Methanosarcina/enzimologia , Oxirredutases/metabolismo , Força Próton-Motriz , Trifosfato de Adenosina/biossíntese , Transporte Biológico , Transporte de Elétrons , Modelos Químicos , Oxirredução
10.
Arch Microbiol ; 171(2): 115-21, 1999 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9914308

RESUMO

Washed membranes prepared from H2+CO2- or formate-grown cells of Methanococcus voltae catalyzed the oxidation of coenzyme F420H2 and the reduction of the heterodisulfide (CoB-S-S-CoM) of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate, which is the terminal electron acceptor of the methanogenic pathway. The reaction followed a 1:1 stoichiometry according to the equation: F420H2 + COB-S-S-CoM --> F420 + CoM-SH + CoB-SH. These findings indicate that the reaction depends on a membrane-bound F420H2-oxidizing enzyme and on the heterodisulfide reductase, which remains partly membrane-bound after cell lysis. To elucidate the nature of the F420H2-oxidizing protein, washed membranes were solubilized with detergent, and the enzyme was purified by sucrose density centrifugation, anion-exchange chromatography, and gel filtration. Several lines of evidence indicate that F420H2 oxidation is catalyzed by a membrane-associated F420-reducing hydrogenase. The purified protein catalyzed the H2-dependent reduction of methyl viologen and F420. The apparent molecular mass and the subunit composition (43, 37, and 27 kDa) are almost identical to those of the F420-reducing hydrogenase that has already been purified from Mc. voltae. Moreover, the N-terminus of the 37-kDa subunit is identical to the amino acid sequence deduced from the fruG gene of the operon encoding the selenium-containing F420-reducing hydrogenase from Mc. voltae. A distinct F420H2 dehydrogenase, which is present in methylotrophic methanogens, was not found in this organism.

11.
Eur J Biochem ; 259(1-2): 218-24, 1999 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9914496

RESUMO

The proton translocating electron transport systems (F420H2:heterodisulfide oxidoreductase and H2:heterodisulfide oxidoreductase) of Methanosarcina mazei Gö1 were inhibited by diphenyleneiodonium chloride (DPI) indicated by IC50 values of 20 nmol DPI.mg-1 protein and 45 nmol DPI.mg-1 protein, respectively. These effects are due to a complex interaction of DPI with key enzymes of the electron transport chains. It was found that 2-hydroxyphenazine-dependent reactions as catalyzed by F420-nonreducing hydrogenase, F420H2 dehydrogenase and heterodisulfide reductase were inhibited. Interestingly, the H2-dependent methylviologen reduction and the heterodisulfide reduction by reduced methylviologen as catalyzed by the hydrogenase and the heterodisulfide reductase present in washed membranes were unaffected by DPI, respectively. Analysis of the redox behavior of membrane-bound cytochromes indicated that DPI inhibited CoB-S-S-CoM-dependent oxidation of reduced cytochromes and H2-dependent cytochrome reduction. Membrane-bound and purified F420H2 dehydrogenase were inhibited by DPI irrespectively whether methylviologen + metronidazole or 2-hydroxyphenazine were used as electron acceptors. Detailed examination of 2-hydroxy-phenazine-dependent F420H2-oxidation revealed that DPI is a competitive inhibitor of the enzyme, indicated by the Km value for 2-hydroxyphenazine, which increased from 35 microm to 100 microm in the presence of DPI. As DPI and phenazines are structurally similar with respect to their planar configuration we assume that the inhibitor is able to bind to positions where interaction between phenazines and components of the electron transport systems take place. Thus, electron transfer from reduced 2-hydroxyphenazine to cytochrome b2 as part of the heterodisulfide reductase and from H2 to cytochrome b1 as subunit of the membrane-bound hydrogenase is affected in the presence of DPI. In case of the F420H2 dehydrogenase electron transport from FAD or from FeS centers to 2-hydroxyphenazine is inhibited.


Assuntos
Proteínas de Bactérias , Methanosarcina/enzimologia , Oniocompostos/farmacologia , Oxirredutases/antagonistas & inibidores , Ligação Competitiva , Grupo dos Citocromos b/metabolismo , Transporte de Elétrons/efeitos dos fármacos , Inibidores Enzimáticos/farmacologia , Ferritinas/metabolismo , Cinética , L-Lactato Desidrogenase/metabolismo , L-Lactato Desidrogenase (Citocromo) , Proteínas de Membrana/efeitos dos fármacos , Modelos Biológicos , Fenazinas/metabolismo
12.
FEBS Lett ; 428(3): 295-8, 1998 May 29.
Artigo em Inglês | MEDLINE | ID: mdl-9654152

RESUMO

F420H2-dependent CoB-S-S-CoM reduction as catalyzed by the F420H2:heterodisulfide oxidoreductase from Methanosarcina strains was observed in a defined system containing purified F420H2 dehydrogenase from Methanosarcina mazei Gö1, 2-hydroxyphenazine and purified heterodisulfide reductase from Methanosarcina thermophila. The process could be divided into two partial reactions: (1) reducing equivalents from F420H2 were transferred to 2-hydroxyphenazine by the F420H2 dehydrogenase with a Vmax value of 12 U/mg protein; (2) reduced 2-hydroxyphenazine acted as electron donor for CoB-S-S-CoM reduction as catalyzed by the heterodisulfide reductase. The specific activity was 14-16 U/mg protein at 37 degrees C and 60-70 U/mg protein at 60 degrees C. The partial reactions could be combined in the presence of both enzymes. Under these conditions reduced 2-hydroxyphenazine was rapidly oxidized by the heterodisulfide reductase thereby producing the electron acceptor for the F420H2 dehydrogenase. Above a concentration of 50 microM of 2-hydroxyphenazine, the specific activity of the latter enzyme reached the Vmax value. When other phenazines or quinone derivatives were used as electron carriers, the activity of F420H2-dependent CoB-S-S-CoM reduction was much lower than the rate obtained with 2-hydroxyphenazine. Thus, this water-soluble analogue of methanophenazine best mimics the natural electron acceptor methanophenazine in aqueous systems.


Assuntos
Methanosarcina/enzimologia , Oxirredutases/metabolismo , Antibacterianos/metabolismo , Transporte de Elétrons , Cinética , Modelos Químicos , Oxirredução , Fenazinas/metabolismo , Especificidade por Substrato , Termodinâmica
13.
J Bacteriol ; 180(8): 2027-32, 1998 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-9555882

RESUMO

A hydrophobic, redox-active component with a molecular mass of 538 Da was isolated from lyophilized membranes of Methanosarcina mazei Gö1 by extraction with isooctane. After purification on a high-performance liquid chromatography column, the chemical structure was analyzed by mass spectroscopy and nuclear magnetic resonance studies. The component was called methanophenazine and represents a 2-hydroxyphenazine derivative which is connected via an ether bridge to a polyisoprenoid side chain. Since methanophenazine was almost insoluble in aqueous buffers, water-soluble phenazine derivatives were tested for their ability to interact with membrane-bound enzymes involved in electron transport and energy conservation. The purified F42OH2 dehydrogenase from M. mazei Gö1 showed highest activity with 2-hydroxyphenazine and 2-bromophenazine as electron acceptors when F420H2 was added. Phenazine-1-carboxylic acid and phenazine proved to be less effective. The Km values for 2-hydroxyphenazine and phenazine were 35 and 250 microM, respectively. 2-Hydroxyphenazine was also reduced by molecular hydrogen catalyzed by an F420-nonreactive hydrogenase which is present in washed membrane preparations. Furthermore, the membrane-bound heterodisulfide reductase was able to use reduced 2-hydroxyphenazine as an electron donor for the reduction of CoB-S-S-CoM. Considering all these results, it is reasonable to assume that methanophenazine plays an important role in vivo in membrane-bound electron transport of M. mazei Gö1.


Assuntos
Methanosarcina/metabolismo , Oxirredutases/metabolismo , Fenazinas/química , Fenazinas/metabolismo , Membrana Celular/metabolismo , Cromatografia Líquida de Alta Pressão , Transporte de Elétrons , Cinética , Espectrometria de Massas , Modelos Químicos , Estrutura Molecular , Ressonância Magnética Nuclear Biomolecular , Oxirredutases/isolamento & purificação , Fenazinas/isolamento & purificação , Especificidade por Substrato
14.
Arch Microbiol ; 164(5): 370-6, 1995 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-8572889

RESUMO

The expression of the vho and vht operons from Methanosarcina mazei Gö1, which each encode a membrane-bound hydrogenase and a cytochrome b, was analyzed under various growth conditions. Synthesis of both hydrogenases was induced at the level of transcription during methanogenesis from H2/CO2 or methanol. Transcripts of the vho operon were also detected when Ms. mazei Gö1 was grown on acetate, indicating that this operon is constitutively expressed. In contrast, mRNA from the vht operon was not found in acetate-grown cells. Downstream of the structural genes vhtG and vhtA and the cytochrome-b-encoding gene vhtC, an additional open reading frame (vhtD; 486 bp) was identified. vhtD is followed by six tandem repeats of an 11-bp sequence, which is probably a termination site of transcription. Northern blots revealed that vhtD is part of the vht operon. In the vho operon, a vhtD-like gene and a terminator composed of tandem repeats could not be identified. The physiological function of two genetically distinct, membrane-bound hydrogenases from Ms. mazei Gö1 is discussed.


Assuntos
Proteínas Arqueais , Proteínas de Bactérias/genética , Regulação Bacteriana da Expressão Gênica/genética , Hidrogenase/genética , Proteínas de Membrana/genética , Methanosarcina/genética , Óperon/genética , Oxirredutases , Sequência de Aminoácidos , Proteínas de Bactérias/química , Sequência de Bases , Clonagem Molecular , Grupo dos Citocromos b/genética , Genes Bacterianos/genética , Hidrogenase/química , Methanosarcina/enzimologia , Methanosarcina/crescimento & desenvolvimento , Modelos Químicos , Dados de Sequência Molecular , RNA Bacteriano/análise , RNA Mensageiro/análise , Alinhamento de Sequência , Análise de Sequência de DNA
15.
J Bacteriol ; 177(17): 4851-6, 1995 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-7665460

RESUMO

DNA sequence analysis of the modABCD operon of Escherichia coli revealed the presence of four open reading frames. The first gene, modA, codes for a 257-amino-acid periplasmic binding protein enunciated by the presence of a signal peptide-like sequence. The second gene (modB) encodes a 229-amino-acid protein with a potential membrane location, while the 352-amino-acid ModC protein (modC product) contains a nucleotide-binding motif. On the basis of sequence similarities with proteins from other transport systems and molybdate transport proteins from other organisms, these three proteins are proposed to constitute the molybdate transport system. The fourth open reading frame (modD) encodes a 231-amino-acid protein of unknown function. Plasmids containing different mod genes were used to map several molybdate-suppressible chlorate-resistant mutants; interestingly, none of the 40 mutants tested had a mutation in the modD gene. About 35% of these chlorate-resistant mutants were not complemented by mod operon DNA. These mutants, designated mol, contained mutations at unknown chromosomal location(s) and produced formate hydrogenlyase activity only when cultured in molybdate-supplemented glucose-minimal medium, not in L broth. This group of mol mutants constitutes a new class of molybdate utilization mutants distinct from other known mutants in molybdate metabolism. These results show that molybdate, after transport into cells by the ModABC proteins, is metabolized (activated?) by the products of the mol gene(s).


Assuntos
Escherichia coli/genética , Genes Bacterianos/genética , Molibdênio/metabolismo , Óperon/genética , Sequência de Aminoácidos , Sequência de Bases , Transporte Biológico/genética , Cloratos/farmacologia , Resistência Microbiana a Medicamentos/genética , Formiato Desidrogenases/biossíntese , Hidrogenase/biossíntese , Dados de Sequência Molecular , Complexos Multienzimáticos/biossíntese , Mutação , Fases de Leitura Aberta/genética , Análise de Sequência de DNA
16.
J Bacteriol ; 177(4): 1023-9, 1995 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-7860583

RESUMO

The mod (chlD) locus at 17 min on the Escherichia coli chromosome encodes a high-affinity molybdate uptake system. To further investigate the structure and regulation of these genes, the DNA region upstream of the previously identified modBC (chlJD) genes was cloned and sequenced. A single open reading frame, designated modA, was identified and appears to encode a periplasmic binding protein for the molybdate uptake system. To determine how the mod genes are regulated in response to molybdate, nitrate, and oxygen, we constructed a series of mod-lacZ operon fusions to the upstream region and introduced them in single copy onto the E. coli chromosome. Whereas molybdate limitation resulted in elevated mod-lacZ expression, neither oxygen nor nitrate had any significant effect on gene expression. A regulatory motif, CATAA, located at the modA promoter was identified and shown to be required for molybdate-dependent control of the modABCD operon. Mutations within this sequence resulted in nearly complete derepression of gene expression and suggest that transcription of the operon is mediated by a molybdenum-responsive regulatory protein.


Assuntos
Coenzimas , Proteínas de Ligação a DNA , Proteínas de Escherichia coli , Escherichia coli/genética , Regulação Bacteriana da Expressão Gênica , Molibdênio/metabolismo , Óperon/genética , Proteínas Quinases , Alelos , Proteínas de Bactérias/genética , Sequência de Bases , Transporte Biológico , Escherichia coli/efeitos dos fármacos , Proteínas de Membrana/genética , Metaloproteínas/metabolismo , Dados de Sequência Molecular , Cofatores de Molibdênio , Mutação , Nitratos/farmacologia , Oxigênio/farmacologia , Fosfoproteínas/genética , Regiões Promotoras Genéticas/genética , Pteridinas/metabolismo , Proteínas Recombinantes de Fusão/biossíntese , Proteínas Repressoras/genética
17.
Eur J Biochem ; 227(1-2): 261-9, 1995 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-7851393

RESUMO

DNA encompassing the structural genes of two membrane-bound hydrogenases from Methanosarcina mazei Gö1 was cloned and sequenced. The genes, arranged in the order vhoG and vhoA as well as vhtG and vhtA, were identified as those encoding the small and the large subunits of the NiFe hydrogenases [Deppenmeier, U., Blaut, M., Schmidt, B. & Gottschalk, G. (1992) Arch. Microbiol. 157, 505-511]. Northern-blot analysis revealed that the structural genes formed part of two operons, both containing one additional open reading frame (vhoC and vhtC) which codes for a cytochrome b. This conclusion was drawn from the homology of the deduced N-terminal amino acid sequences of vhoC and vhtC and the N-terminus of a 27-kDa cytochrome isolated from Ms. mazei C16. VhoC and VhtC contain four tentative hydrophobic segments which might span the cytoplasmic membrane. Hydropathy plots suggest that His23 and His50 are involved in heme coordination. The comparison of the sequencing data of vhoG and vhtG with the experimentally determined N-terminus of the small subunit indicate the presence of a 48-amino-acid leader peptide in front of the polypeptides. VhoA and VhtA contained the conserved sequence DPCXXC in the C-terminal region, which excludes the presence of a selenocysteine residue in these hydrogenases. Promoter sequences were found upstream of vhoG and vhtG, respectively. Downstream of vhoC, a putative terminator sequence was identified. Alignments of the deduced amino acid sequences of the gene clusters vhoGAC and vhtGAC showed 92-97% identity. Only the C-termini of VhoC and VhtC were not similar.


Assuntos
Grupo dos Citocromos b/genética , Hidrogenase/genética , Proteínas de Membrana/genética , Methanosarcina/genética , Óperon , Sequência de Aminoácidos , Sequência de Bases , Northern Blotting , Grupo dos Citocromos b/isolamento & purificação , DNA Bacteriano , Proteínas de Membrana/isolamento & purificação , Methanosarcina/enzimologia , Dados de Sequência Molecular , Homologia de Sequência do Ácido Nucleico
18.
Eur J Biochem ; 203(3): 527-31, 1992 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-1735436

RESUMO

The oxidation of F420H2 (reduced coenzyme F420) is a key reaction in the final step of methanogenesis. This step is catalyzed in Methanolobus tindarius by the membrane-bound F420H2-dehydrogenase which was purified 31-fold to apparent homogeneity. The apparent molecular mass of the native enzyme was 120 kDa. Sodium dodecyl sulfate/polyacrylamide gel electrophoresis revealed the presence of five different subunits of apparent molecular masses of 45 kDa, 40 kDa, 22 kDa, 18 kDa and 17 kDa. The purified F420H2-dehydrogenase, which was yellowish, contained 16 +/- 2 mol iron and 16 +/- 3 mol acid-labile sulfur/mol enzyme. No flavin could be detected. The oxygen-stable enzyme catalyzed the oxidation of F420H2 (apparent Km = 5.4 microM) with methylviologen and metronidazole as electron acceptors at a specific rate of 13 mumol.min-1.mg-1 (kcat = 25.5 s-1). The isoelectric point was at pH 5.0. The temperature optimum was at 37 degrees C and the pH optimum at 6.8.


Assuntos
Euryarchaeota/enzimologia , Oxirredutases/isolamento & purificação , Catálise , Cromatografia de Afinidade , Eletroforese em Gel de Poliacrilamida , Ponto Isoelétrico , Peso Molecular , Oxirredução , Oxirredutases/metabolismo , Análise Espectral
19.
Arch Microbiol ; 157(6): 505-11, 1992.
Artigo em Inglês | MEDLINE | ID: mdl-1503532

RESUMO

The distribution of the F420-reactive and F420-nonreactive hydrogenases from the methylotrophic Methanosarcina strain Gö1 indicated a membrane association of the F420-nonreactive enzyme. The membrane-bound F420-nonreactive hydrogenase was purified 42-fold to electrophoretic homogeneity with a yield of 26.7%. The enzyme had a specific activity of 359 mumol H2 oxidized.min-1.mg protein-1. The purification procedure involved dispersion of the membrane fraction with the detergent Chaps followed by anion exchange, hydrophobic and hydroxylapatite chromatography. The aerobically prepared enzyme had to be reactivated anaerobically. Maximal activity was observed at 80 degrees C. The molecular mass as determined by native gel electrophoresis and gel filtration was 77,000 and 79,000, respectively. SDS gel electrophoresis revealed two polypeptides with molecular masses of 60,000 and 40,000 indicating a 1:1 stoichiometry. The purified enzyme contained 13.3 mol S2-, 15.1 mol Fe and 0.8 mol Ni/mol enzyme. Flavins were not detected. The amino acid sequence of the N-termini of the subunits showed a higher degree of homology to eubacterial uptake-hydrogenases than to F420-dependent hydrogenases from other methanogenic bacteria. The physiological function of the F420-nonreactive hydrogenase from Methanosarcina strain Göl is discussed.


Assuntos
Hidrogenase/isolamento & purificação , Methanosarcina/enzimologia , Sequência de Aminoácidos , Coenzimas/metabolismo , Membranas/enzimologia , Dados de Sequência Molecular , Riboflavina/análogos & derivados , Riboflavina/metabolismo , Homologia de Sequência do Ácido Nucleico
20.
Proc Natl Acad Sci U S A ; 87(23): 9449-53, 1990 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-11607121

RESUMO

Washed everted vesicles of the methanogenic bacterium strain Go1 were found to couple the F420H2-dependent heterodisulfide reduction with the transfer of protons across the membrane into the lumen of the everted vesicles. The transmembrane electrochemical potential of protons thereby generated was shown to be competent in driving ATP synthesis from ADP + Pi, exhibiting a stoichiometry of 2 H+ translocated or 0.4 ATP synthesized per F420H2 oxidized. This enzyme system exhibits the phenomenon of coupling and uncoupling and represents a different kind of electron transport chain with the heterodisulfide of 2-mercaptoethanesulfonate and 7-mercaptoheptanoylthreonine phosphate as terminal electron acceptor. The heterodisulfide and methane are formed in the methyl coenzyme M reductase reaction. The reducing equivalents are derived from reduced coenzyme F420, which represents an analogue of NADH + H+ in other respiratory chains. It is assumed that the proton-translocating oxidoreductase discovered in strain Go1 is of principal importance to all methanogenic bacteria not utilizing H2.

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