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1.
FEMS Microbiol Ecol ; 94(4)2018 04 01.
Artigo em Inglês | MEDLINE | ID: mdl-29481638

RESUMO

Viruses are recognized as important actors in ocean ecology and biogeochemical cycles, but many details are not yet understood. We participated in a winter expedition to the Weddell Sea, Antarctica, to isolate viruses and to measure virus-like particle abundance (flow cytometry) in sea ice. We isolated 59 bacterial strains and the first four Antarctic sea-ice viruses known (PANV1, PANV2, OANV1 and OANV2), which grow in bacterial hosts belonging to the typical sea-ice genera Paraglaciecola and Octadecabacter. The viruses were specific for bacteria at the strain level, although OANV1 was able to infect strains from two different classes. Both PANV1 and PANV2 infected 11/15 isolated Paraglaciecola strains that had almost identical 16S rRNA gene sequences, but the plating efficiencies differed among the strains, whereas OANV1 infected 3/7 Octadecabacter and 1/15 Paraglaciecola strains and OANV2 1/7 Octadecabacter strains. All the phages were cold-active and able to infect their original host at 0°C and 4°C, but not at higher temperatures. The results showed that virus-host interactions can be very complex and that the viral community can also be dynamic in the winter-sea ice.


Assuntos
Bacteriófagos/classificação , Bacteriófagos/crescimento & desenvolvimento , Camada de Gelo/microbiologia , Camada de Gelo/virologia , Proteobactérias/virologia , Regiões Antárticas , Bacteriófagos/genética , Bacteriófagos/isolamento & purificação , Ecologia , Filogenia , Proteobactérias/classificação , Proteobactérias/genética , RNA Ribossômico 16S/genética , Estações do Ano , Água do Mar/microbiologia , Água do Mar/virologia
2.
Microbiologyopen ; 3(1): 139-56, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24443388

RESUMO

The structure of sea-ice bacterial communities is frequently different from that in seawater. Bacterial entrainment in sea ice has been studied with traditional microbiological, bacterial abundance, and bacterial production methods. However, the dynamics of the changes in bacterial communities during the transition from open water to frozen sea ice is largely unknown. Given previous evidence that the nutritional status of the parent water may affect bacterial communities during ice formation, bacterial succession was studied in under ice water and sea ice in two series of mesocosms: the first containing seawater from the North Sea and the second containing seawater enriched with algal-derived dissolved organic matter (DOM). The composition and dynamics of bacterial communities were investigated with terminal restriction fragment length polymorphism (T-RFLP), and cloning alongside bacterial production (thymidine and leucine uptake) and abundance measurements (measured by flow cytometry). Enriched and active sea-ice bacterial communities developed in ice formed in both unenriched and DOM-enriched seawater (0-6 days). γ-Proteobacteria dominated in the DOM-enriched samples, indicative of their capability for opportunistic growth in sea ice. The bacterial communities in the unenriched waters and ice consisted of the classes Flavobacteria, α- and γ-Proteobacteria, which are frequently found in natural sea ice in polar regions. Furthermore, the results indicate that seawater bacterial communities are able to adapt rapidly to sudden environmental changes when facing considerable physicochemical stress such as the changes in temperature, salinity, nutrient status, and organic matter supply during ice formation.


Assuntos
Bactérias/isolamento & purificação , Camada de Gelo/microbiologia , Microbiota/fisiologia , Compostos Orgânicos/química , Água do Mar/microbiologia , Bactérias/genética , Carga Bacteriana , DNA Bacteriano/genética , Ecossistema , Congelamento , Gammaproteobacteria/genética , Gammaproteobacteria/isolamento & purificação , Gammaproteobacteria/fisiologia , Microbiota/genética , Mar do Norte , Filogenia , Polimorfismo de Fragmento de Restrição , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Ribotipagem , Salinidade , Alinhamento de Sequência , Homologia de Sequência do Ácido Nucleico
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