Tanaidacea of Greece: a preliminary checklist.

BACKGROUND: The checklist of Tanaidacea of Greece was developed in the framework of the LifeWatchGreece Research Infrastructure (ESFRI) project and coordinated by the Hellenic Centre for Marine Research during the period 2013-2015. By applying the Greek Taxon Information System (GTIS) of this project, a complete checklist of species recorded from Greek Seas has been developed. The objectives of the present study were to update and cross-check all tanaidacean species known to occur in Greek Seas. Inaccuracies and omissions according to recent literature and the current taxonomic status were also investigated. NEW INFORMATION: The up-to-date checklist of Tanaidacea of Greece comprises 20 species, classified to 11 genera and five families.

Field studies of seahorse population density, structure and habitat use in a semi-closed north-eastern Mediterranean marine area (Stratoni, North Aegean Sea).

The present study was carried out in the marine area of Stratoni, Greece, where two seahorse species are present (Hippocampus hippocampus and Hippocampus guttulatus). Two surveys were conducted (September 2016 and May 2019) to gather information regarding seahorse species' abundance, distribution and habitat characteristics. Four different seahorse natural and artificial habitat types were identified. The results revealed that the presence of H. hippocampus was relatively high, especially at sites with artificial structures, whereas the presence of H. guttulatus was rare. Data collected can provide baseline information for future population assessments.

Stomatopoda of Greece: an annotated checklist.

BACKGROUND: The checklist of Stomatopoda of Greece was developed in the framework of the LifeWatchGreece Research Infrastructure (ESFRI) project, coordinated by the Institute of Marine Biology, Biotechnology and Aquaculture (IMBBC) of the Hellenic Centre for Marine Research (HCMR). The application of the Greek Taxon Information System (GTIS) of this project has been used in order to develop a complete checklist of species recorded from the Greek Seas. The objectives of the present study were to update and cross-check all the stomatopod species that are known to occur in the Greek Seas. Inaccuracies and omissions were also investigated, according to literature and current taxonomic status. NEW INFORMATION: The up-to-date checklist of Stomatopoda of Greece comprises nine species, classified to eight genera and three families.

A de novo transcriptome assembly for the bath sponge Spongia officinalis, adjusting for microsymbionts.

OBJECTIVES: We report a transcriptome acquisition for the bath sponge Spongia officinalis, a non-model marine organism that hosts rich symbiotic microbial communities. To this end, a pipeline was developed to efficiently separate between bacterial expressed genes from those of eukaryotic origin. The transcriptome was produced to support the assessment of gene expression and, thus, the response of the sponge, to elevated temperatures, replicating conditions currently occurring in its native habitat. DATA DESCRIPTION: We describe the assembled transcriptome along with the bioinformatic pipeline used to discriminate between signals of metazoan and prokaryotic origin. The pipeline involves standard read pre-processing steps and incorporates extra analyses to identify and filter prokaryotic reads out of the analysis. The proposed pipeline can be followed to overcome the technical RNASeq problems characteristic for symbiont-rich metazoan organisms with low or non-existent tissue differentiation, such as sponges and cnidarians. At the same time, it can be valuable towards the development of approaches for parallel transcriptomic studies of symbiotic communities and the host.

Testing the robustness of Citizen Science projects: Evaluating the results of pilot project COMBER.

BACKGROUND: Citizen Science (CS) as a term implies a great deal of approaches and scopes involving many different fields of science. The number of the relevant projects globally has been increased significantly in the recent years. Large scale ecological questions can be answered only through extended observation networks and CS projects can support this effort. Although the need of such projects is apparent, an important part of scientific community cast doubt on the reliability of CS data sets. NEW INFORMATION: The pilot CS project COMBER has been created in order to provide evidence to answer the aforementioned question in the coastal marine biodiversity monitoring. The results of the current analysis show that a carefully designed CS project with clear hypotheses, wide participation and data sets validation, can be a valuable tool for the large scale and long term changes in marine biodiversity pattern change and therefore for relevant management and conservation issues.

Long-term (1998-2010) large-scale comparison of the ecological quality status of gulf of lions (NW Mediterranean) benthic habitats.

A comprehensive Mediterranean data set has been used to address 3 questions associated with the use of sensitivity/tolerance based biotic indices to infer the Ecological Quality status (EcoQs) of benthic habitats. Our results showed: (1) a significant effect of the reference database on derived sensitivity/tolerance measure (ES500.05) as well as associated Benthic Quality Index values and derived EcoQs; (2) a lack of correlation neither between BQI and AZTI Marine Biotic Index values nor between BQI and Multivariate-AZTI Marine Biotic Index values; (3) a lack of correlation between the values of the Benthic Habitat Quality Index (index derived from Sediment Profile Imagery) and those of either of the 3 tested biotic indices; and (4) a general agreement between the 3 tested biotic indices in describing the lack of global trend for the EcoQs of the Gulf of Lions despite the occurrence of significant changes in benthic macrofauna composition between 1998 and 2010.

Engaging the broader community in biodiversity research: the concept of the COMBER pilot project for divers in ViBRANT.

This paper discusses the design and implementation of a citizen science pilot project, COMBER (Citizens' Network for the Observation of Marine BiodivERsity, http://www.comber.hcmr.gr), which has been initiated under the ViBRANT EU e-infrastructure. It is designed and implemented for divers and snorkelers who are interested in participating in marine biodiversity citizen science projects. It shows the necessity of engaging the broader community in the marine biodiversity monitoring and research projects, networks and initiatives. It analyses the stakeholders, the industry and the relevant markets involved in diving activities and their potential to sustain these activities. The principles, including data policy and rewards for the participating divers through their own data, upon which this project is based are thoroughly discussed. The results of the users analysis and lessons learned so far are presented. Future plans include promotion, links with citizen science web developments, data publishing tools, and development of new scientific hypotheses to be tested by the data collected so far.