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1.
Parkinsonism Relat Disord ; 20(6): 578-83, 2014 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-24674770

RESUMO

Excessive daytime sleepiness (EDS) is common in Parkinson's Disease (PD). Actigraphy uses periods of immobility as surrogate markers of nighttime sleep but there are no examples of its use in assessing EDS of PD. A commercial wrist worn system for measuring bradykinesia and dyskinesia also detects 2 min periods of immobility, which have a 85.2% concordance with the detection of sleep by ambulatory daytime polysomnography, (p < 0.0001 Chi Squared). High Epworth Sleepiness Scores (ESS) were associated with a proportion of time immobile (PTI) (p = 0.01 Mann-Whitney U). The median PTI between 0900 and 1800 h w in 30 age matched control subjects was 2%, representing 10 min and PTI at or above the 75th percentile (5% or 27 min) was taken as a high level. PD patients had higher PTI (median 4.8%) than controls (p < 0.0001, Mann-Whitney U). PD subjects with a high PTI had more bradykinesia, less dyskinesia and higher PDQ39 scores than those with low PTI. There was no relationship between PTI and dose or type of PD medications. However, in 53% of subjects, PTI increased in the 30-60 min after levodopa confirming that in some subjects levodopa results in increased sleepiness. In summary, immobility is a surrogate marker of daytime sleep in PD, confirmed by correlation with PSG and ESS. PD subjects measured this way are more likely to be sleepy and sleepy PD subjects are more likely to be bradykinetic and have a higher PDQ39. Levodopa leads to an increase in sleepiness in more than half of subjects post dosing.


Assuntos
Distúrbios do Sono por Sonolência Excessiva/diagnóstico , Distúrbios do Sono por Sonolência Excessiva/etiologia , Hipocinesia/diagnóstico , Imobilização , Doença de Parkinson/complicações , Acelerometria , Adulto , Idoso , Idoso de 80 Anos ou mais , Discinesias/diagnóstico , Discinesias/etiologia , Feminino , Humanos , Hipocinesia/etiologia , Masculino , Pessoa de Meia-Idade , Polissonografia
2.
Arch Dis Child ; 95(12): 1031-3, 2010 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19850594

RESUMO

OBJECTIVE: The gold standard assessment for sleep quality is polysomnography (PSG). However, actigraphy has gained popularity as an ambulatory monitor. We aimed to assess the value of actigraphy in measuring sleep fragmentation in children. METHODS: 130 children aged 2-18 years referred for assessment for sleep disordered breathing (SDB) were recruited. The arousal index (AI) scored from PSG was compared to the actigraphic fragmentation index (FI) and number of wake bouts/h. RESULTS: The ability of actigraphic measures to correctly classify a child as having an AI>10 events/h rated as fair for the FI and poor for wake bouts/h (area under the receiver operator characteristic curve, 0.73 and 0.67, respectively). CONCLUSION: Actigraphy provides only a fair indication of the level of arousal from sleep in children. While the limitations of actigraphy prevent it from being a diagnostic tool for SDB, it still has a role in evaluating sleep/wake schedules in children.


Assuntos
Actigrafia/métodos , Privação do Sono/diagnóstico , Adolescente , Criança , Pré-Escolar , Feminino , Humanos , Masculino , Polissonografia/métodos , Índice de Gravidade de Doença , Síndromes da Apneia do Sono/diagnóstico
3.
J Sleep Res ; 15(2): 199-205, 2006 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-16704575

RESUMO

Central Sleep Apnoea (CSA) occurs commonly in heart failure. Adaptive servo-ventilation (ASV) and deadspace (DS) have been shown in research settings to reverse CSA. The likely mechanism for this is the increase of PaCO(2) above the apnoeic threshold. However the role of increasing FiCO(2) on arousability remains unclear. To compare the effects of ASV and DS on sleep and breathing, in particular effects on Arousal Index (ArI), ten male patients with heart failure and CSA were studied during three nights with polysomnography plus measurements of PetCO(2). The order of the interventions control (C), ASV and DS was randomized. ASV and DS caused similar reductions in apnoea-hypopnoea index [(C) 30.0 +/- 6.6, (ASV) 14.0 +/- 3.8, (DS) 15.9 +/- 4.7 e h(-1); both P < 0.05]. However, DS was associated with decreased total sleep time compared with C (P < 0.02) and increased spontaneous ArI compared to C and ASV (both P < 0.01). Only DS was associated with increased DeltaPetCO(2) from resting wakefulness to eupnic sleep [(C) 2.1 +/- 0.9, (ASV) 1.3 +/- 1.0, (DS) 5.6 +/- 0.5 mmHg; P = 0.01]. ASV and DS both stabilized ventilation however DS application also increased sleep fragmentation with negative impacts on sleep architecture. We speculate that this effect is likely to be mediated by increased PetCO(2) and respiratory effort associated with DS application.


Assuntos
Adaptação Fisiológica/fisiologia , Espaço Morto Respiratório/fisiologia , Síndromes da Apneia do Sono , Apneia do Sono Tipo Central/fisiopatologia , Apneia do Sono Tipo Central/terapia , Adulto , Insuficiência Cardíaca/complicações , Insuficiência Cardíaca/fisiopatologia , Humanos , Masculino , Polissonografia , Respiração Artificial/métodos , Apneia do Sono Tipo Central/diagnóstico , Vigília
4.
Eur Respir J ; 27(4): 748-55, 2006 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-16585081

RESUMO

The symptom burden resulting from sleep-disordered breathing (SDB) in patients with mild-to-moderate congestive heart failure (CHF) is unclear. The current authors monitored 24-h activity levels and compared subjective and objective measures of daytime sleepiness in 39 CHF patients, New York Heart Association class 2-3, on optimal medication. A total of 22 patients were classified as SDB (apnoea/hypopnoea index (AHI) median (range) 22.3 (16.6-100) events.h-1), and 17 as no SDB (NoSDB; AHI 3.7 (0-12.3) events.h-1). SDB was defined as AHI>or=15 events.h-1. Patients were assessed by 24-h activity monitoring (actigraphy) for a period of up to 14 days, a single objective sleepiness test (Oxford Sleep Resistance test) and Epworth Sleepiness Scale. The duration of daytime activity was significantly shorter in the SDB group compared with the NoSDB group. The SDB group also had increased time in bed and poorer sleep quality, as shown by the fragmentation index. Objectively the SDB group when compared with the NoSDB group were significantly sleepier, subjectively the groups did not differ. The amount of napping was similar for both groups. Despite the lack of subjective symptoms of daytime sleepiness, congestive heart failure patients with sleep-disordered breathing were objectively sleepier during the day and had reduced daytime activity with longer periods in bed and poorer sleep quality when compared with those without sleep-disordered breathing.


Assuntos
Efeitos Psicossociais da Doença , Insuficiência Cardíaca/psicologia , Síndromes da Apneia do Sono/psicologia , Atividades Cotidianas/psicologia , Idoso , Ritmo Circadiano , Feminino , Insuficiência Cardíaca/diagnóstico , Humanos , Masculino , Pessoa de Meia-Idade , Monitorização Ambulatorial , Atividade Motora , Polissonografia , Síndromes da Apneia do Sono/diagnóstico , Vigília
5.
Auton Neurosci ; 120(1-2): 18-25, 2005 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-15908282

RESUMO

Sleep-related changes in pharyngeal function result in an increased resistance to airflow and in some people complete pharyngeal occlusion. Clinically, pharyngeal occlusion causes obstructive sleep apnoea syndrome (OSA). This is a prevalent disorder, which is an independent risk factor for the development of systemic hypertension. Several mechanisms contribute to the sleep-related changes in pharyngeal function in both health and disease, including a reduction in respiratory-related muscle activation, and an increase in latency of the pharyngeal reflex to negative intralumenal pressure. Arousal from sleep causes increases in ventilation and autonomic cardiovascular function that far exceed physiological requirements--the so-called 'waking reflex'. In patients with OSA the waking reflex is augmented either by hypoxemia, hypercapnia, or large swings in intrathoracic pressure. How these factors interact to cause the acute surges in heart rate and systemic blood pressure that occur at the termination of an apnoea will be reviewed, together with the longer term consequences of pharyngeal occlusion during sleep.


Assuntos
Obstrução das Vias Respiratórias/fisiopatologia , Sistema Nervoso Autônomo/fisiologia , Faringe/fisiologia , Mecânica Respiratória/fisiologia , Sono/fisiologia , Animais , Humanos
6.
RNA ; 7(10): 1442-53, 2001 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-11680849

RESUMO

The decoding of UGA as a selenocysteine (Sec) codon in mammalian selenoprotein mRNAs requires a selenocysteine insertion sequence (SECIS) element in the 3' untranslated region. The SECIS is a hairpin structure that contains a non-Watson-Crick base-pair quartet with a conserved G.A/A.G tandem in the core of the upper helix. Another essential component of the Sec insertion machinery is SECIS-binding protein 2 (SBP2). In this study, we define the binding site of SBP2 on six different SECIS RNAs using enzymatic and hydroxyl radical footprinting, gel mobility shift analysis, and phosphate-ethylation binding interference. We show that SBP2 binds to a variety of mammalian SECIS elements with similar affinity and that the SBP2 binding site is conserved across species. Based on footprinting studies, SBP2 protects the proximal part of the hairpin and both strands of the lower half of the upper helix that contains the non-Watson-Crick base pair quartet. Gel mobility shift assays showed that the G.A/A.G tandem and internal loop are critical for the binding of SBP2. Modification of phosphates by ethylnitrosourea along both strands of the non-Watson-Crick base pair quartet, on the 5' strand of the lower helix and part of the 5' strand of the internal loop, prevented binding of SBP2. We propose a model in which SBP2 covers the central part of the SECIS RNA, binding to the non-Watson-Crick base pair quartet and to the 5' strands of the lower helix and internal loop. Our results suggest that the affinity of SBP2 for different SECIS elements is not responsible for the hierarchy of selenoprotein expression that is observed in vivo.


Assuntos
Proteínas de Ligação a DNA/metabolismo , Proteínas de Ligação a RNA , RNA/metabolismo , Selenocisteína/metabolismo , Animais , Pareamento de Bases , Sequência de Bases , Primers do DNA , Humanos , Camundongos , Modelos Moleculares , Conformação de Ácido Nucleico , RNA/química , Ratos , Proteínas Recombinantes/metabolismo
7.
Biofactors ; 14(1-4): 11-6, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11568435

RESUMO

Selenocysteine is incorporated into protein by a complex co-translational mechanism that involves both cis and trans acting factors. Among the trans-acting factors are RNA binding proteins that interact with the selenoprotein 3' UTRs at a sequence known as the selenocysteine insertion sequence (SECIS). These factors are generally referred to as SBPs, and in this review we will discuss the history of the SBPs, and give a detailed description of the recently identified SBP2 which is the only SBP known to be required for Sec insertion. The mechanism by which SBP2 may be involved in this process will be discussed.


Assuntos
Proteínas/genética , Proteínas de Ligação a RNA/metabolismo , Selenocisteína/metabolismo , Regiões 3' não Traduzidas/genética , Animais , Elementos de DNA Transponíveis , Biossíntese de Proteínas , RNA Mensageiro/genética , RNA de Transferência Aminoácido-Específico/metabolismo , Selenoproteínas
8.
Biofactors ; 14(1-4): 17-24, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11568436

RESUMO

The mechanism of selenocysteine incorporation in eukaryotes has been assumed for almost a decade to be inherently different from that in prokaryotes, due to differences in the architecture of selenoprotein mRNAs in the two kingdoms. After extensive efforts in a number of laboratories spanning the same time frame, some of the essential differences between these mechanisms are finally being revealed, through identification of the factors catalyzing cotranslational selenocysteine insertion in eukaryotes. A single factor in prokaryotes recognizes both the selenoprotein mRNA, via sequences in the coding region, and the unique selenocysteyl-tRNA, via both its secondary structure and amino acid. The corresponding functions in eukaryotes are conferred by two distinct but interacting factors, one recognizing the mRNA, via structures in the 3' untranslated region, and the second recognizing the tRNA. Now, with these factors in hand, crucial questions about the mechanistic details and efficiency of this intriguing process can begin to be addressed.


Assuntos
Regiões 3' não Traduzidas/genética , Fatores de Alongamento de Peptídeos/metabolismo , Proteínas/genética , RNA de Transferência Aminoácido-Específico/metabolismo , Selenocisteína/metabolismo , Regiões 3' não Traduzidas/metabolismo , Animais , Células Eucarióticas/metabolismo , Mathanococcus/genética , Mathanococcus/metabolismo , Biossíntese de Proteínas , RNA Mensageiro/genética , Proteínas de Ligação a RNA/metabolismo , Selenoproteínas
9.
Mol Cell Biol ; 21(5): 1491-8, 2001 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-11238886

RESUMO

The cotranslational incorporation of the unusual amino acid selenocysteine (Sec) into both prokaryotic and eukaryotic proteins requires the recoding of a UGA stop codon as one specific for Sec. The recognition of UGA as Sec in mammalian selenoproteins requires a Sec insertion sequence (SECIS) element in the 3' untranslated region as well as the SECIS binding protein SBP2. Here we report a detailed analysis of SBP2 structure and function using truncation and site-directed mutagenesis. We have localized the RNA binding domain to a conserved region shared with several ribosomal proteins and eukaryotic translation termination release factor 1. We also identified a separate and novel functional domain N-terminal to the RNA binding domain which was required for Sec insertion but not for SECIS binding. Conversely, we showed that the RNA binding domain was necessary but not sufficient for Sec insertion and that the conserved glycine residue within this domain was required for SECIS binding. Using glycerol gradient sedimentation, we found that SBP2 was stably associated with the ribosomal fraction of cell lysates and that this interaction was not dependent on its SECIS binding activity. This interaction also occurred with purified components in vitro, and we present data which suggest that the SBP2-ribosome interaction occurs via 28S rRNA. SBP2 may, therefore, have a distinct function in selecting the ribosomes to be used for Sec insertion.


Assuntos
Proteínas de Ligação a RNA/química , Proteínas de Ligação a RNA/genética , Ribossomos/metabolismo , Selenocisteína/química , Selenocisteína/genética , Regiões 3' não Traduzidas , Sequência de Aminoácidos , Animais , Centrifugação com Gradiente de Concentração , Códon de Terminação , Eletroforese em Gel de Poliacrilamida , Glicerol/metabolismo , Humanos , Modelos Genéticos , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Fatores de Terminação de Peptídeos/metabolismo , Mutação Puntual , Ligação Proteica , Biossíntese de Proteínas , Estrutura Terciária de Proteína , RNA/metabolismo , RNA Ribossômico 28S/metabolismo , Proteínas de Ligação a RNA/fisiologia , Ratos , Proteínas Recombinantes/metabolismo , Homologia de Sequência de Aminoácidos , Células Tumorais Cultivadas
10.
RNA ; 6(11): 1573-84, 2000 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-11105757

RESUMO

The translation of mammalian selenoprotein mRNAs requires the 3' untranslated region that contains a selenocysteine insertion sequence (SECIS) element necessary for decoding an in-frame UGA codon as selenocysteine (Sec). Selenoprotein biosynthesis is inefficient, which may be due to competition between Sec insertion and termination at the UGA/Sec codon. We analyzed the polysome distribution of phospholipid hydroperoxide glutathione peroxidase (PHGPx) mRNA, a member of the glutathione peroxidase family of selenoproteins, in rat hepatoma cell and mouse liver extracts. In linear sucrose gradients, the sedimentation velocity of PHGPx mRNA was impeded compared to CuZn superoxide dismutase (SOD) mRNA, which has a coding region of similar size. Selenium supplementation increased the loading of ribosomes onto PHGPx mRNA, but not CuZn SOD mRNA. To determine whether the slow sedimentation velocity of PHGPx mRNA is due to a block in elongation, we analyzed the polysome distribution of wild-type and mutant mRNAs translated in vitro. Mutation of the UGA/Sec codon to UGU/cysteine increased ribosome loading and protein synthesis. When UGA/Sec was replaced with UAA or when the SECIS element core was deleted, the distribution of the mutant mRNAs was similar to the wild-type mRNA. Addition of SECIS-binding protein SBP2, which is essential for Sec insertion, increased ribosome loading and translation of wild-type PHGPx mRNA, but had no effect on the mutant mRNAs. These results suggest that elongation is impeded at UGA/Sec, and that selenium and SBP2 alleviate this block by promoting Sec incorporation instead of termination.


Assuntos
Glutationa Peroxidase/genética , Fígado/enzimologia , Elongação Traducional da Cadeia Peptídica , Polirribossomos/genética , RNA Mensageiro/genética , Selenocisteína , Regiões 3' não Traduzidas/genética , Substituição de Aminoácidos , Animais , Fracionamento Celular , Códon/genética , Elementos de DNA Transponíveis , Neoplasias Hepáticas Experimentais/enzimologia , Neoplasias Hepáticas Experimentais/genética , Masculino , Camundongos , Mutagênese Sítio-Dirigida , Fosfolipídeo Hidroperóxido Glutationa Peroxidase , Biossíntese de Proteínas , Proteínas/genética , Ratos , Reticulócitos/enzimologia , Selenoproteínas , Células Tumorais Cultivadas
11.
Mol Cell Biol ; 20(5): 1846-54, 2000 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-10669759

RESUMO

The C-to-U editing of apolipoprotein B (apo-B) mRNA is catalyzed by a multiprotein complex that recognizes an 11-nucleotide mooring sequence downstream of the editing site. The catalytic subunit of the editing enzyme, apobec-1, has cytidine deaminase activity but requires additional unidentified proteins to edit apo-B mRNA. We purified a 65-kDa protein that functionally complements apobec-1 and obtained peptide sequence information which was used in molecular cloning experiments. The apobec-1 complementation factor (ACF) cDNA encodes a novel 64.3-kDa protein that contains three nonidentical RNA recognition motifs. ACF and apobec-1 comprise the minimal protein requirements for apo-B mRNA editing in vitro. By UV cross-linking and immunoprecipitation, we show that ACF binds to apo-B mRNA in vitro and in vivo. Cross-linking of ACF is not competed by RNAs with mutations in the mooring sequence. Coimmunoprecipitation experiments identified an ACF-apobec-1 complex in transfected cells. Immunodepletion of ACF from rat liver extracts abolished editing activity. The immunoprecipitated complexes contained a functional holoenzyme. Our results support a model of the editing enzyme in which ACF binds to the mooring sequence in apo-B mRNA and docks apobec-1 to deaminate its target cytidine. The fact that ACF is widely expressed in human tissues that lack apobec-1 and apo-B mRNA suggests that ACF may be involved in other RNA editing or RNA processing events.


Assuntos
Apolipoproteínas B/genética , Edição de RNA/genética , Proteínas de Ligação a RNA/genética , Desaminase APOBEC-1 , Sequência de Aminoácidos , Animais , Apolipoproteínas B/metabolismo , Clonagem Molecular , Citidina Desaminase/genética , DNA Complementar/genética , DNA Complementar/isolamento & purificação , Humanos , Dados de Sequência Molecular , RNA Mensageiro/genética , Proteínas de Ligação a RNA/metabolismo , Ratos
12.
EMBO J ; 19(2): 306-14, 2000 Jan 17.
Artigo em Inglês | MEDLINE | ID: mdl-10637234

RESUMO

In eukaryotes, the decoding of the UGA codon as selenocysteine (Sec) requires a Sec insertion sequence (SECIS) element in the 3' untranslated region of the mRNA. We purified a SECIS binding protein, SBP2, and obtained a cDNA clone that encodes this activity. SBP2 is a novel protein containing a putative RNA binding domain found in ribosomal proteins and a yeast suppressor of translation termination. By UV cross-linking and immunoprecipitation, we show that SBP2 specifically binds selenoprotein mRNAs both in vitro and in vivo. Using (75)Se-labeled Sec-tRNA(Sec), we developed an in vitro system for analyzing Sec incorporation in which the translation of a selenoprotein mRNA was both SBP2 and SECIS element dependent. Immunodepletion of SBP2 from the lysates abolished Sec insertion, which was restored when recombinant SBP2 was added to the reaction. These results establish that SBP2 is essential for the co-translational insertion of Sec into selenoproteins. We hypothesize that the binding activity of SBP2 may be involved in preventing termination at the UGA/Sec codon.


Assuntos
Biossíntese de Proteínas , Proteínas/genética , RNA Mensageiro/metabolismo , Proteínas de Ligação a RNA/metabolismo , Sequência de Aminoácidos , Animais , Sequência de Bases , Sítios de Ligação , Códon/genética , Sequência Conservada , Humanos , Neoplasias Hepáticas Experimentais , Mamíferos , Dados de Sequência Molecular , RNA Mensageiro/genética , Proteínas de Ligação a RNA/química , Proteínas de Ligação a RNA/genética , Ratos , Proteínas Recombinantes/metabolismo , Selenocisteína/genética , Selenocisteína/metabolismo , Selenoproteínas , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Especificidade por Substrato , Transfecção , Células Tumorais Cultivadas
13.
EMBO Rep ; 1(2): 158-63, 2000 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-11265756

RESUMO

Decoding UGA as selenocysteine requires a unique tRNA, a specialized elongation factor, and specific secondary structures in the mRNA, termed SECIS elements. Eukaryotic SECIS elements are found in the 3' untranslated region of selenoprotein mRNAs while those in prokaryotes occur immediately downstream of UGA. Consequently, a single eukaryotic SECIS element can serve multiple UGA codons, whereas prokaryotic SECIS elements only function for the adjacent UGA, suggesting distinct mechanisms for recoding in the two kingdoms. We have identified and characterized the first eukaryotic selenocysteyl-tRNA-specific elongation factor. This factor forms a complex with mammalian SECIS binding protein 2, and these two components function together in selenocysteine incorporation in mammalian cells. Expression of the two functional domains of the bacterial elongation factor-SECIS binding protein as two separate proteins in eukaryotes suggests a mechanism for rapid exchange of charged for uncharged selenocysteyl-tRNA-elongation factor complex, allowing a single SECIS element to serve multiple UGA codons.


Assuntos
Regiões 3' não Traduzidas/genética , Conformação de Ácido Nucleico , Fatores de Alongamento de Peptídeos/metabolismo , Proteínas , Aminoacil-RNA de Transferência/genética , Sequências Reguladoras de Ácido Nucleico , Selenocisteína/genética , Sequência de Aminoácidos , Animais , Linhagem Celular , Humanos , Camundongos , Dados de Sequência Molecular , Fatores de Alongamento de Peptídeos/química , Fatores de Alongamento de Peptídeos/genética , Biossíntese de Proteínas , Aminoacil-RNA de Transferência/metabolismo , Proteínas de Ligação a RNA/genética , Proteínas de Ligação a RNA/metabolismo , Ratos , Selenocisteína/metabolismo , Selenoproteínas , Alinhamento de Sequência , Transfecção
14.
J Biol Chem ; 274(36): 25447-54, 1999 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-10464275

RESUMO

In mammalian selenoprotein mRNAs, the highly structured 3' UTR contains selenocysteine insertion sequence (SECIS) elements that are required for the recognition of UGA as the selenocysteine codon. Our previous work demonstrated a tight correlation between codon-specific translational read-through and the activity of a 120-kDa RNA-binding protein that interacted specifically with the SECIS element in the phospholipid hydroperoxide glutathione peroxidase mRNA. This study reports the RNA binding and biochemical properties of this protein, SECIS-binding protein 2 (SBP2). We detected SBP2 binding activity in liver, hepatoma cell, and testis extracts from which SBP2 has been purified by anion exchange and RNA affinity chromatography. This scheme has allowed us to identify a 120-kDa polypeptide that co-elutes with SBP2 binding activity from wild-type but not mutant RNA affinity columns. A characterization of SBP2 biochemical properties reveals that SBP2 binding is sensitive to oxidation and the presence of heparin, rRNA, and poly(G). SBP2 activity elutes with a molecular mass of approximately 500 kDa during gel filtration chromatography, suggesting the existence of a large functional complex. Direct cross-linking and competition experiments demonstrate that the minimal phospholipid hydroperoxide glutathione peroxidase 3' UTR binding site is between 82 and 102 nucleotides, which correlates with the minimal sequence necessary for translational read-through. SBP2 also interacts specifically with the minimally functional 3' UTR of another selenoprotein mRNA, deiodinase 1.


Assuntos
Biossíntese de Proteínas , Proteínas , Proteínas de Ligação a RNA , Animais , Sequência de Bases , Sítios de Ligação , Masculino , Dados de Sequência Molecular , Especificidade de Órgãos , Oxirredução , RNA/metabolismo , Proteínas de Ligação a RNA/genética , Proteínas de Ligação a RNA/isolamento & purificação , Proteínas de Ligação a RNA/metabolismo , Ratos , Selenoproteínas
15.
J Biol Chem ; 274(3): 1814-20, 1999 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-9880564

RESUMO

Published studies demonstrate that lipid transfer inhibitor protein (LTIP) is an important regulator of cholesteryl ester transfer protein (CETP) activity. Although LTIP inhibits CETP activity among different lipoprotein classes, it preferentially suppresses transfer events involving low density lipoprotein (LDL), whereas transfers involving high density lipoprotein as donor are less affected. In this study, we report the purification of LTIP and the expression of its cDNA in cultured cells. Purification of LTIP, in contrast to other published protocols, took advantage of the tight association of this protein with LDL. Ultracentrifugally isolated LDL was further purified on anti-apoE and apoA-I affinity columns. Affinity purified LDL was delipidated by tetramethylurea, and the tetramethylurea-soluble proteins were separated by SDS-polyacrylamide gel electrophoresis. The protein migrating at a molecular mass of approximately 33 kDa was excised from the gel and its N-terminal amino acid sequence determined. The 14-amino acid sequence obtained showed complete homology with the sequence deduced for apolipoprotein F (apoF) cDNA isolated from Hep G2 cells. On Western blots, peptide-specific antibodies raised against synthetic fragments of apoF reacted with the same 33-kDa protein in LTIP-containing fractions purified from LDL and from lipoprotein-deficient plasma. In contrast to that previously reported, apoF was shown to be associated almost exclusively with LDL, identical to the distribution of LTIP activity. The cDNA for apoF was cloned from a human liver cDNA library, ligated into a mammalian expression vector, and transiently transfected into COS-7 cells. Conditioned media containing secreted apoF demonstrated CETP inhibitor activity, whereas cells transfected with vector alone did not. This CETP inhibitor activity was efficiently removed from the media by nickel-Sepharose, consistent with the 6-His tag incorporated into recombinant apoF. By Western blot, the 6-His-tagged protein had a molecular weight slightly larger than native apoF. The CETP inhibitor activity of recombinant apoF possessed the same LDL specificity, oleate sensitivity, and dependence on lipoprotein concentration as previously noted for LTIP. We conclude that LTIP and apoF are identical.


Assuntos
Apolipoproteínas/genética , Proteínas de Transporte/antagonistas & inibidores , Glicoproteínas , Sequência de Aminoácidos , Animais , Apolipoproteínas/química , Apolipoproteínas/isolamento & purificação , Sequência de Bases , Western Blotting , Células COS , Proteínas de Transferência de Ésteres de Colesterol , Clonagem Molecular , Eletroforese em Gel de Poliacrilamida , Humanos , Lipoproteínas HDL/metabolismo , Lipoproteínas LDL/metabolismo , Dados de Sequência Molecular , Transfecção
16.
Mol Cell Biol ; 18(8): 4426-32, 1998 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-9671452

RESUMO

The editing of apolipoprotein B (apo-B) mRNA involves the site-specific deamination of cytidine to uracil. The specificity of editing is conferred by an 11-nucleotide mooring sequence located downstream from the editing site. Apobec-1, the catalytic subunit of the editing enzyme, requires additional proteins to edit apo-B mRNA in vitro, but the function of these additional factors, known as complementing activity, is not known. Using RNA affinity chromatography, we show that the complementing activity binds to a 280-nucleotide apo-B RNA in the absence of apobec-1. The activity did not bind to the antisense strand or to an RNA with three mutations in the mooring sequence. The eluate from the wild-type RNA column contained a 65-kDa protein that UV cross-linked to apo-B mRNA but not to the triple-mutant RNA. This protein was not detected in the eluates from the mutant or the antisense RNA columns. Introduction of the mooring sequence into luciferase RNA induced cross-linking of the 65-kDa protein. A 65-kDa protein that interacted with apobec-1 was also detected by far-Western analysis in the eluate from the wild-type RNA column but not from the mutant RNA column. For purification, proteins were precleared on the mutant RNA column prior to chromatography on the wild-type RNA column. Silver staining of the affinity-purified fraction detected a single prominent protein of 65 kDa. Our results suggest that the complementing activity may function as the RNA-binding subunit of the holoenzyme.


Assuntos
Apolipoproteínas B/genética , Citidina Desaminase/metabolismo , Edição de RNA , Proteínas de Ligação a RNA/metabolismo , Desaminase APOBEC-1 , Animais , Apolipoproteína B-100 , Cromatografia de Afinidade , Reagentes de Ligações Cruzadas , Citidina Desaminase/genética , RNA Mensageiro , Ratos , Relação Estrutura-Atividade
17.
Spine (Phila Pa 1976) ; 22(18): 2066-72, 1997 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-9322316

RESUMO

STUDY DESIGN: A magnetic resonance imaging study of the internal kinematic response of normal lumbar intervertebral discs to non-weight-bearing flexion and extension. OBJECTIVES: To quantify the pattern of magnetic resonance imaging pixel intensity variation across discs, and noninvasively monitor displacement of the nucleus pulposus during sagittal-plane movements. SUMMARY OF BACKGROUND DATA: Invasive techniques used to study intradiscal movements of the nucleus pulposus have suggested that it moves posteriorly during flexion and anteriorly during extension. A noninvasive study based on magnetic resonance images gave similar results for normal young women. Quantification has been problematic, and the invasive procedures may have altered disc dynamics. METHODS: Ten male subjects (age, 21-38 years) with healthy backs were positioned in a magnetic resonance imaging portal with their lumbar spine stabilized in flexion and extension by supporting pads. For each disc, a T2-weighted image was obtained, as was a computer-generated profile of pixel intensities along a horizontal mid-discal transect. Mathematical curve-fitting regression analysis was used to characterize the shape of the intensity profile and to compute the point of maximum pixel intensity. RESULTS: A single equation fitted the profile for all normal discs. The intensity peak shifted posteriorly during flexion, anteriorly during extension. CONCLUSIONS: Automated mathematical modeling of magnetic resonance imaging pixel data can be used to describe the fundamental shape of the pixel intensity profile across a normal lumbar disc, to determine the precise location of the site of maximum pixel intensity, and to measure the movement of this peak with flexion and extension. This technique may be of value in recognizing incipient degenerative changes in lumbar discs.


Assuntos
Disco Intervertebral/fisiologia , Vértebras Lombares/fisiologia , Imageamento por Ressonância Magnética/métodos , Amplitude de Movimento Articular , Adulto , Interpretação Estatística de Dados , Humanos , Processamento de Imagem Assistida por Computador , Cinética , Masculino , Modelos Biológicos
18.
Mol Cell Biol ; 17(4): 1977-85, 1997 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-9121445

RESUMO

In mammalian selenoprotein mRNAs, the recognition of UGA as selenocysteine requires selenocysteine insertion sequence (SECIS) elements that are contained in a stable stem-loop structure in the 3' untranslated region (UTR). In this study, we investigated the SECIS elements and cellular proteins required for selenocysteine insertion in rat phospholipid hydroperoxide glutathione peroxidase (PhGPx). We developed a translational readthrough assay for selenoprotein biosynthesis by using the gene for luciferase as a reporter. Insertion of a UGA or UAA codon into the coding region of luciferase abolished luciferase activity. However, activity was restored to the UGA mutant, but not to the UAA mutant, upon insertion of the PhGPx 3' UTR. The 3' UTR of rat glutathione peroxidase (GPx) also allowed translational readthrough, whereas the PhGPx and GPx antisense 3' UTRs did not. Deletion of two conserved SECIS elements in the PhGPx 3' UTR (AUGA in the 5' stem or AAAAC in the terminal loop) abolished readthrough activity. UV cross-linking studies identified a 120-kDa protein in rat testis that binds specifically to the sense strands of the PhGPx and GPx 3' UTRs. Direct cross-linking and competition experiments with deletion mutant RNAs demonstrated that binding of the 120-kDa protein requires the AUGA SECIS element but not AAAAC. Point mutations in the AUGA motif that abolished protein binding also prevented readthrough of the UGA codon. Our results suggest that the 120-kDa protein is a significant component of the mechanism of selenocysteine incorporation in mammalian cells.


Assuntos
Proteínas de Ligação a RNA/metabolismo , Selenocisteína/genética , Selenocisteína/metabolismo , Animais , Sequência de Bases , Sítios de Ligação/genética , Códon/genética , Sequência Conservada , Reagentes de Ligações Cruzadas , Genes Reporter , Glutationa Peroxidase/genética , Humanos , Luciferases/genética , Masculino , Dados de Sequência Molecular , Peso Molecular , Conformação de Ácido Nucleico , Oligodesoxirribonucleotídeos/genética , Fosfolipídeo Hidroperóxido Glutationa Peroxidase , Biossíntese de Proteínas , RNA Mensageiro/química , RNA Mensageiro/genética , RNA Mensageiro/metabolismo , Proteínas de Ligação a RNA/química , Ratos , Deleção de Sequência , Homologia de Sequência do Ácido Nucleico , Testículo/metabolismo
19.
J Biol Chem ; 271(45): 28294-9, 1996 Nov 08.
Artigo em Inglês | MEDLINE | ID: mdl-8910449

RESUMO

The editing of apolipoprotein-B (apoB) mRNA involves the deamination of cytidine at nucleotide 6666 to uridine. The catalytic subunit of the editing enzyme, apobec-1, is a cytidine deaminase that requires other unidentified proteins to edit apoB mRNA in vitro. We partially purified an activity from baboon kidney that functionally complements apobec-1. The complementing activity was protease-sensitive and micrococcal nuclease-resistant, had a native molecular mass of 65 +/- 10 kDa on size exclusion chromatography, and sedimented at 4.5 S in glycerol gradients. Purified recombinant His6-tagged apobec-1 immobilized on beads depleted >90% of the complementing activity from partially purified extracts. These beads edited apoB mRNA in vitro in the absence of exogenous apobec-1 or complementing activity. A functional holoenzyme containing apobec-1 and the complementing activity was eluted from the apobec-1-affinity resin using 0.5 M imidazole, whereas buffer containing 0.4 M KCl eluted only the complementing activity. The carboxyl-terminal 59 amino acids of apobec-1 were not required for interaction with the complementing activity in vitro. Our results demonstrate that the complementing protein interacts directly with apobec-1 in the absence of apoB mRNA.


Assuntos
Apolipoproteínas B/genética , Proteínas de Transporte/metabolismo , Citidina Desaminase/metabolismo , Processamento Pós-Transcricional do RNA , RNA Mensageiro/metabolismo , Desaminase APOBEC-1 , Animais , Western Blotting , Cromatografia em Gel , Citidina/metabolismo , Deleção de Genes , Papio , Proteínas Recombinantes/metabolismo
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