Proton-assisted air oxidation mechanisms of iron(ii) bis-thiosemicarbazone complexes at physiological pH: a kinetico-mechanistic study.

The kinetics of oxidation of different biologically-active FeII bis-thiosemicarbazone complexes in water has been monitored at varying dioxygen concentration, temperature, pressure, and pH. The oxidation reactions observed can be resolved as a single-step process, producing the expected ferric complex, with rates increasing with decreasing pH. From the pH-dependence of the observed rate constants, a rate law with two terms can be derived, one of them being independent of the acid concentration and the other term showing a saturation behaviour with respect to [H+]. These results indicate the existence of two parallel pathways for oxidation: the acid-independent pathway is only operative for the complexes with ligands bearing terminal, non-coordinated, unsubstituted amines, whereas the term with a [H+]-limiting kinetic behaviour is observed for all the complexes and indicates that the reacting species has to be protonated prior to the oxidation step. From the data collected, the rate law and the thermal and pressure activation parameters have been used to interpret the operating reaction mechanisms. Given the fact that the empirical trends rule out an outer-sphere oxidation process, DFT calculations have been carried out to explain the results and suggest the likely formation, under steady-state very low concentration conditions, of FeIII superoxo and hydroperoxo intermediates.

Kinetic, DFT and TD-DFT studies on the mechanism of stabilization of pyramidal H3PO3 at the [Mo3M'S4(H2O)10]4+ clusters (M' = Pd, Ni).

The kinetics of reaction between the [Mo(3)M'S(4)(H(2)O)(10)](4+) clusters (M' = Pd, Ni) and H(3)PO(3) has been studied in 4.0 M Hpts/Lipts (pts(-) = p-toluenesulfonate). For both complexes there is an initial kinetic step with small absorbance changes that corresponds to substitution of the water coordinated to Pd by a molecule of tetrahedral H(3)PO(3). For the Pd complex, tautomerization of H(3)PO(3) occurs in a slower kinetic step with much larger absorbance changes; it leads to formation of [Mo(3)Pd(pyr-H(3)PO(3))S(4)(H(2)O)(9)](4+) in which H(3)PO(3) adopts a pyramidal structure, but the process is not as favored as for H(3)PO(2). The kinetics of this second step is independent of the concentration of H(3)PO(3) but dependent on the concentration of Hpts on the supporting electrolyte. For the Ni complex, the second step is severely hindered and its kinetics could not be studied. DFT calculations indicate that tautomerization of H(3)PO(3) is expected to be less favoured than that of H(3)PO(2), both processes being less favored at the Ni cluster than at its Pd analogue. With regard to the tautomerization mechanism, the calculations indicate that the mechanism previously proposed for H(3)PO(2) can be the same for H(3)PO(3), although the initial H-shift can also occur through a protonation-deprotonation sequence with participation of external protons instead of a second molecule of the phosphorus acid. TD-DFT studies have been also carried out to understand the similarity between the spectra of the starting complex and the reaction intermediate formed in the first kinetic step as well as the large spectral changes associated to the tautomerization process. Although it contains contributions from several transitions, the intense band observed for clusters containing coordinated pyr-H(3)PO(3) involves essentially ligand-to-metal charge-transfer (LMCT) transitions.

Dihydrogen complexes: striking effect of ion pairing to BF(4)(-) on the rotation of coordinated dihydrogen and the (19)F relaxation time.

Unexpected changes in the T(1) values for the (19)F NMR signal of the BF(4)(-) anion in the presence of dihydrogen complexes reveal that ion pairing with BF(4)(-)...H(2) interactions of different strengths can lead to significant changes in the rotation barrier for coordinated dihydrogen.

Combined kinetic and DFT studies on the stabilization of the pyramidal form of H3PO2 at the heterometal site of [Mo3M'S4(H2O)10]4+ clusters (M' = Pd, Ni).

Kinetic and DFT studies have been carried out on the reaction of the [Mo(3)M'S(4)(H(2)O)(10)](4+) clusters (M' = Pd, Ni) with H(3)PO(2) to form the [Mo(3)M'(pyr-H(3)PO(2))S(4)(H(2)O)(9)](4+) complexes, in which the rare pyramidal form of H(3)PO(2) is stabilized by coordination to the M' site of the clusters. The reaction proceeds with biphasic kinetics, both steps showing a first order dependence with respect to H(3)PO(2). These results are interpreted in terms of a mechanism that involves an initial substitution step in which one tetrahedral H(3)PO(2) molecule coordinates to M' through the oxygen atom of the P=O bond, followed by a second step that consists in tautomerization of coordinated H(3)PO(2) assisted by a second H(3)PO(2) molecule. DFT studies have been carried out to obtain information on the details of both kinetic steps, the major finding being that the role of the additional H(3)PO(2) molecule in the second step consists in catalysing a hydrogen shift from phosphorus to oxygen in O-coordinated H(3)PO(2), which is made possible by its capability of accepting a proton from P-H to form H(4)PO(2)(+) and then transfer it to the oxygen. DFT studies have been also carried out on the reaction at the Mo centres to understand the reasons that make these metal centres ineffective for promoting tautomerization.

Catalytic effect of a second H3PO2 in the mechanism of stabilisation of the unstable pyramidal tautomer of H3PO2 coordinated at [Mo3S4M'] clusters (M' = Ni, Pd).

Kinetic and DFT studies indicate that the stabilization of a single pyramidal H(3)PO(2) molecule at the M' site of [Mo(3)S(4)M'] clusters requires the participation of two tetrahedral H(3)PO(2) molecules, the role of the second one being assisting tautomerization of a previously coordinated tetrahedral H(3)PO(2).

Crucial role of anions on the deprotonation of the cationic dihydrogen complex trans-[FeH(eta2-H2)(dppe)2]+.

The kinetics of reaction of the dihydrogen complex trans-[FeH(eta2-H2)(dppe)2]+ with an excess of NEt3 to form cis-[FeH2(dppe)2] shows a first-order dependence with respect to both the metal complex and the base. The corresponding second-order rate constant only shows minor changes when the solvent is changed from THF to acetone. However, the presence of salts containing the BF4-, PF6-, and BPh4- anions causes larger kinetic changes, the reaction being accelerated by BF4- and PF6- and decelerated in the presence of BPh4-. These results can be interpreted considering that the ion pairs formed by the complex and the anion provide a reaction pathway more efficient than that going through the unpaired metal complex. From the kinetic results in acetone solution, the stability of the ion pairs and the rate constant for their conversion to the reaction products have been derived. Theoretical calculations provide additional information about the reaction mechanism both in the absence and in the presence of anions. In all cases, the reaction occurs with proton transfer from the trans-dihydride to the base through intermediate structures showing Fe-H2...N and Fe-H...H...N dihydrogen bonds, isomerization to the cis product occurring once the proton transfer step has been completed. Optimized geometries for the ion pairs show that the anions are placed close to the H2 ligand. In the case of BPh4-, the bulky phenyls hinder the approach of the base and make the ion pairs unproductive for proton transfer. However, ion pairs with BF4- and PF6- can interact with the base and evolve to the final products, the anion accompanying the proton through the whole proton transfer process, which occurs with an activation barrier lower than for the unpaired metal complex.

Ag(I) complexes with alkylidene-bis(2-aminopyrimidines) as building units for discrete metallomacrocyclic frames. A structural and solution study.

Alkylidene-bis(2-aminopyrimidines) (pyr2Cx, x = 2-5) are useful ligands to interact with Ag(I) yielding discrete metallocycles. Crystal structures of the [(pyr2C2)Ag(NO3)]2 and [(H-pyr2C4)Ag(NO3)2]2 have been isolated where each macrocyclic moiety interacts with their surroundings through weak interactions, yielding 3D discrete structures, On the other hand, the solution study shows that the equilibrium constants for the formation of Ag(pyr2Cx)+ complexes are higher than the literature values for Ag(I) complexes with single pyrimidines, although the differences could be explained by invoking the solid-state structures of the Ag(I)-pyr2Cx complexes.

Synthesis, equilibrium studies and structural characterisation of the Zn(II) complexes with trimethylene-N6,N6'-bisadenine.

The new compound trimethylene-N(6),N(6')-bisadenine (L), in which two adenine molecules are linked together by a trimethylene bridge that connects the N(6) atoms, has been prepared. Reaction of L with HgCl(2) and ZnCl(2) in concentrated HCl solution leads to crystalline solids. The X-ray characterisation of the Hg(II) complex (H(2)L)[HgCl(4)].3H(2)O reveals that it is an outer-sphere complex in which the ligand is protonated at N(1) and N(1'). In contrast, the structure of the complex [H(2)L(ZnCl(3))(2)].2H(2)O shows the ligand co-ordinated to two different Zn(II) ions through the N(7) of both adenine fragments, the protons being located on the N(1) atoms. The latter compound constitutes the first crystallographic evidence of an inner sphere complex with bis-adenines and, for this reason, an equilibrium study was carried out on the Zn(II)-L-H(+) system. Potentiometric studies indicate that L is protonated in aqueous solution to form HL(+) and H(2)L(2+) with logK(H) values of 4.42 and 3.35 (25 degrees C, 0.10 M KNO(3)). The data from potentiometric titrations in the presence of Zn(2+) can be analysed considering the formation of the species LZn(2+), HLZn(3+), LZn(2)(4+) and HLZn(2)(5+), whose stability constants exceed the value expected for a monodentate interaction of the metal ion with adenine and suggest the possibility of a polydentate behaviour of L in the pH range 2.5-5.0. In contrast, spectrophotometric titrations carried out under conditions similar to those used in the synthetic work (1 M HCl) can be fitted with a model involving exclusively the H(2)LZn(4+) and H(2)LZn(2)(6+) species with logK(M) values reasonable for the interaction of Zn(II) with the N(7) of the protonated adenine fragments. Despite the H(2)LZn(2)(6+) species has a low stability, the spectrophotometric results are in agreement with its formation under the conditions in which the solid complex was prepared.