Engineering a new-to-nature cascade for phosphate-dependent formate to formaldehyde conversion in vitro and in vivo.

Formate can be envisioned at the core of a carbon-neutral bioeconomy, where it is produced from CO2 by (electro-)chemical means and converted into value-added products by enzymatic cascades or engineered microbes. A key step in expanding synthetic formate assimilation is its thermodynamically challenging reduction to formaldehyde. Here, we develop a two-enzyme route in which formate is activated to formyl phosphate and subsequently reduced to formaldehyde. Exploiting the promiscuity of acetate kinase and N-acetyl-γ-glutamyl phosphate reductase, we demonstrate this phosphate (Pi)-based route in vitro and in vivo. We further engineer a formyl phosphate reductase variant with improved formyl phosphate conversion in vivo by suppressing cross-talk with native metabolism and interface the Pi route with a recently developed formaldehyde assimilation pathway to enable C2 compound formation from formate as the sole carbon source in Escherichia coli. The Pi route therefore offers a potent tool in expanding the landscape of synthetic formate assimilation.

The eyes grasp, the hands see: metric category knowledge transfers between vision and touch.

Categorization of seen objects is often determined by the shapes of objects. However, shape is not exclusive to the visual modality: The haptic system also is expert at identifying shapes. Hence, an important question for understanding shape processing is whether humans store separate modality-dependent shape representations, or whether information is integrated into one multisensory representation. To answer this question, we created a metric space of computer-generated novel objects varying in shape. These objects were then printed using a 3-D printer, to generate tangible stimuli. In a categorization experiment, participants first explored the objects visually and haptically. We found that both modalities led to highly similar categorization behavior. Next, participants were trained either visually or haptically on shape categories within the metric space. As expected, visual training increased visual performance, and haptic training increased haptic performance. Importantly, however, we found that visual training also improved haptic performance, and vice versa. Two additional experiments showed that the location of the categorical boundary in the metric space also transferred across modalities, as did heightened discriminability of objects adjacent to the boundary. This observed transfer of metric category knowledge across modalities indicates that visual and haptic forms of shape information are integrated into a shared multisensory representation.

Haptic categorical perception of shape.

Categorization and categorical perception have been extensively studied, mainly in vision and audition. In the haptic domain, our ability to categorize objects has also been demonstrated in earlier studies. Here we show for the first time that categorical perception also occurs in haptic shape perception. We generated a continuum of complex shapes by morphing between two volumetric objects. Using similarity ratings and multidimensional scaling we ensured that participants could haptically discriminate all objects equally. Next, we performed classification and discrimination tasks. After a short training with the two shape categories, both tasks revealed categorical perception effects. Training leads to between-category expansion resulting in higher discriminability of physical differences between pairs of stimuli straddling the category boundary. Thus, even brief training can alter haptic representations of shape. This suggests that the weights attached to various haptic shape features can be changed dynamically in response to top-down information about class membership.

Categorizing natural objects: a comparison of the visual and the haptic modalities.

Although the hands are the most important tool for humans to manipulate objects, only little is known about haptic processing of natural objects. Here, we selected a unique set of natural objects, namely seashells, which vary along a variety of object features, while others are shared across all stimuli. To correctly interact with objects, they have to be identified or categorized. For both processes, measuring similarities between objects is crucial. Our goal is to better understand the haptic similarity percept by comparing it to the visual similarity percept. First, direct similarity measures were analyzed using multidimensional scaling techniques to visualize the perceptual spaces of both modalities. We find that the visual and the haptic modality form almost identical perceptual spaces. Next, we performed three different categorization tasks. All tasks exhibit a highly accurate processing of complex shapes of the haptic modality. Moreover, we find that objects grouped into the same category form regions within the perceptual space. Hence, in both modalities, perceived similarity constitutes the basis for categorizing objects. Moreover, both modalities focus on shape to form categories. Taken together, our results lead to the assumption that the same cognitive processes link haptic and visual similarity perception and the resulting categorization behavior.

Similarity and categorization: from vision to touch.

Even though human perceptual development relies on combining multiple modalities, most categorization studies so far have focused on the visual modality. To better understand the mechanisms underlying multisensory categorization, we analyzed visual and haptic perceptual spaces and compared them with human categorization behavior. As stimuli we used a three-dimensional object space of complex, parametrically-defined objects. First, we gathered similarity ratings for all objects and analyzed the perceptual spaces of both modalities using multidimensional scaling analysis. Next, we performed three different categorization tasks which are representative of every-day learning scenarios: in a fully unconstrained task, objects were freely categorized, in a semi-constrained task, exactly three groups had to be created, whereas in a constrained task, participants received three prototype objects and had to assign all other objects accordingly. We found that the haptic modality was on par with the visual modality both in recovering the topology of the physical space and in solving the categorization tasks. We also found that within-category similarity was consistently higher than across-category similarity for all categorization tasks and thus show how perceptual spaces based on similarity can explain visual and haptic object categorization. Our results suggest that both modalities employ similar processes in forming categories of complex objects.

Visual and haptic perceptual spaces show high similarity in humans.

In this study, we show that humans form highly similar perceptual spaces when they explore complex objects from a parametrically defined object space in the visual and haptic domains. For this, a three-dimensional parameter space of well-defined, shell-like objects was generated. Participants either explored two-dimensional pictures or three-dimensional, interactive virtual models of these objects visually, or they explored three-dimensional plastic models haptically. In all cases, the task was to rate the similarity between two objects. Using these similarity ratings and multidimensional scaling (MDS) analyses, the perceptual spaces of the different modalities were then analyzed. Looking at planar configurations within this three-dimensional object space, we found that active visual exploration led to a highly similar perceptual space compared to passive exploration, showing that participants were able to reconstruct the complex parameter space already from two-dimensional pictures alone. Furthermore, we found that visual and haptic perceptual spaces had virtually identical topology compared to that of the physical stimulus space. Surprisingly, the haptic modality even slightly exceeded the visual modality in recovering the topology of the complex object space when the whole three-dimensional space was explored. Our findings point to a close connection between visual and haptic object representations and demonstrate the great degree of fidelity with which haptic shape processing occurs.