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1.
Sci Rep ; 9(1): 11971, 2019 08 19.
Artigo em Inglês | MEDLINE | ID: mdl-31427620

RESUMO

The Pyrrolysyl-tRNA synthetase (PylRS) and its cognate tRNAPyl are extensively used to add non-canonical amino acids (ncAAs) to the genetic code of bacterial and eukaryotic cells. However, new ncAAs often require a cumbersome de novo engineering process to generate an appropriate PylRS/tRNAPyl pair. We here report a strategy to predict a PylRS variant with novel properties. The designed polyspecific PylRS variant HpRS catalyzes the aminoacylation of 31 structurally diverse ncAAs bearing clickable, fluorinated, fluorescent, and for the first time biotinylated entities. Moreover, we demonstrated a site-specific and copper-free conjugation strategy of a nanobody by the incorporation of biotin. The design of polyspecific PylRS variants offers an attractive alternative to existing screening approaches and provides insights into the complex PylRS-substrate interactions.


Assuntos
Aminoacil-tRNA Sintetases/química , Aminoacil-tRNA Sintetases/genética , Citometria de Fluxo , Ensaios de Triagem em Larga Escala , Lisina/análogos & derivados , Engenharia de Proteínas , Aminoacil-tRNA Sintetases/metabolismo , Citometria de Fluxo/métodos , Biblioteca Gênica , Lisina/química , Lisina/metabolismo , Conformação Molecular , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Relação Estrutura-Atividade , Especificidade por Substrato
2.
J Org Chem ; 83(4): 1842-1851, 2018 02 16.
Artigo em Inglês | MEDLINE | ID: mdl-29313348

RESUMO

A mild aqueous protocol for palladium catalyzed Miyaura borylation of aryl iodides, aryl bromides and aryl chlorides with tetrahydroxydiboron (BBA) as a borylating agent is developed. The developed methodology requires low catalyst loading of Bedford-type palladacycle catalyst (0.05 mol %) and works best under mild reaction conditions at 40 °C in short time of 6 h in water. In addition, our studies show that for Miyaura borylation using BBA in aqueous condition, maintaining a neutral reaction pH is very important for reproducibility and higher yields of corresponding borylated products. Moreover, our protocol is applicable for a broad range of aryl halides, corresponding borylated products are obtained in excellent yields up to 93% with 29 examples demonstrating its broad utility and functional group tolerance.

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