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1.
Magn Reson Med ; 92(6): 2392-2403, 2024 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-39136249

RESUMO

PURPOSE: Advancing the development of 7 T MRI for spinal cord imaging is crucial for the enhanced diagnosis and monitoring of various neurodegenerative diseases and traumas. However, a significant challenge at this field strength is the transmit field inhomogeneity. Such inhomogeneity is particularly problematic for imaging the small, deep anatomical structures of the cervical spinal cord, as it can cause uneven signal intensity and elevate the local specific absorption ratio, compromising image quality. This multisite study explores several RF shimming techniques in the cervical spinal cord. METHODS: Data were collected from 5 participants between two 7 T sites with a custom 8Tx/20Rx parallel transmission coil. We explored two radiofrequency (RF) shimming approaches from an MRI vendor and four from an open-source toolbox, showcasing their ability to enhance transmit field and signal homogeneity along the cervical spinal cord. RESULTS: The circularly polarized (CP), coefficient of variation (CoV), and specific absorption rate (SAR) efficiency shim modes showed the highest B1 + efficiency, and the vendor-based "patient" and "volume" modes showed the lowest B1 + efficiency. The coefficient of variation method produced the highest CSF/spinal cord contrast on T2*-weighted scans (ratio of 1.27 ± 0.03), and the lowest variation of that contrast along the superior-inferior axis. CONCLUSION: The study's findings highlight the potential of RF shimming to advance 7 T MRI's clinical utility for central nervous system imaging by enabling more homogenous and efficient spinal cord imaging. Additionally, the research incorporates a reproducible Jupyter Notebook, enhancing the study's transparency and facilitating peer verification.


Assuntos
Medula Cervical , Imageamento por Ressonância Magnética , Ondas de Rádio , Humanos , Imageamento por Ressonância Magnética/métodos , Medula Cervical/diagnóstico por imagem , Masculino , Feminino , Adulto , Processamento de Imagem Assistida por Computador/métodos , Medula Espinal/diagnóstico por imagem , Algoritmos
2.
IEEE Trans Biomed Eng ; 71(8): 2537-2544, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38512743

RESUMO

OBJECTIVE: To design and fabricate a transmit/receive (T/R) radiofrequency (RF) coil array for MRI of the carotid arteries at 7T with optimal shielding to improve transmit performance in parallel transmit (pTx) mode. METHODS: The carotid coil included 8 total RF elements, with left and right subarrays, each consisting of 4 overlapping loops with RF shields. Electromagnetic (EM) simulations were performed to optimize and improve the transmit performance of the array by determining the optimal distance between the RF shield and each subarray. EM simulations were further used to calculate local specific absorption rate (SAR) matrices. Based on the SAR matrices, virtual observation points (VOPs) were applied to ensure safety during parallel transmission. The efficacy of the coil design was evaluated by measuring coil performance metrics when imaging a phantom and by acquiring in-vivo images. RESULTS: The optimal distance between the RF shield and each subarray was determined to be 45 mm. This resulted in a maximum B1+ efficiency of 1.23 µT/ √W in the carotid arteries and a peak, 10-g-average SAR per Watt of 0.86 kg-1 when transmitting in the nominal CP+ mode. Optimizing the RF shield resulted in up to 37% improvement in B1+ efficiency and 14% improvement in SAR efficiency compared to an unshielded design. CONCLUSION AND SIGNIFICANCE: Optimizing the distance between the RF shield and coil array provided significant improvement in the transmit characteristics of the bilateral carotid coil. The bilateral coil topology provides a compelling platform for imaging the carotid arteries with high field MRI.


Assuntos
Artérias Carótidas , Desenho de Equipamento , Imagens de Fantasmas , Artérias Carótidas/diagnóstico por imagem , Humanos , Imageamento por Ressonância Magnética/instrumentação , Imageamento por Ressonância Magnética/métodos , Angiografia por Ressonância Magnética/instrumentação , Angiografia por Ressonância Magnética/métodos , Masculino
3.
STAR Protoc ; 4(4): 102586, 2023 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-37738120

RESUMO

The common marmoset (Callithrix jacchus) is gaining attention in the field of cognitive neuroscience. The development of an effective protocol for fMRI data acquisition in awake marmosets is a key factor in developing reliable comparative studies. Here, we describe a protocol to obtain fMRI data in awake marmosets using auditory and visual stimulation. We describe steps for surgical and anesthesia procedures, MRI training, and positioning the marmosets within an MRI-compatible body restraint. We then detail fMRI scanning and preprocessing of functional images. For complete details on the use and execution of this protocol, please refer to Jafari et al. (2023).1.


Assuntos
Callithrix , Imageamento por Ressonância Magnética , Animais , Imageamento por Ressonância Magnética/métodos , Callithrix/fisiologia , Vigília , Mapeamento Encefálico
4.
Magn Reson Med ; 90(6): 2242-2260, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37598420

RESUMO

PURPOSE: A significant source of artifacts in MRI are field fluctuations. Field monitoring is a new technology that allows measurement of field dynamics during a scan via "field probes," which can be used to improve image reconstruction. Ideally, probes are located within the volume where gradients produce nominally linear field patterns. However, in some situations probes must be located far from isocenter where rapid field variation can arise, leading to erroneous field-monitoring characterizations and images. This work aimed to develop an algorithm that improves the robustness of field dynamics in these situations. METHODS: The algorithm is split into three components. Component 1 calculates field dynamics one spatial order at a time, whereas the second implements a weighted least squares solution based on probe distance. Component 3 then calculates phase residuals and removes the residual phase for distant probes before recalculation. Two volunteers and a phantom were scanned on a 7T MRI using diffusion-weighted sequences, and field monitoring was performed. Image reconstructions were informed with field dynamics calculated conventionally, and with the correction algorithm, after which in vivo images were compared qualitatively and phantom image error was quantitatively assessed. RESULTS: The algorithm was able to correct corrupted field dynamics, resulting in image-quality improvements. Significant artifact reduction was observed when correcting higher-order fits. Stepwise fitting provided the most correction benefit, which was marginally improved when adding the other correction strategies. CONCLUSION: The proposed algorithm can mitigate effects of phase errors in field monitoring, providing improved characterization of field dynamics.

5.
NMR Biomed ; 36(11): e5002, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37439129

RESUMO

The quality of cervical spinal cord images can be improved by the use of tailored radiofrequency (RF) coil solutions for ultrahigh field imaging; however, very few commercial and research 7-T RF coils currently exist for the spinal cord, and in particular, those with parallel transmission (pTx) capabilities. This work presents the design, testing, and validation of a pTx/Rx coil for the human neck and cervical/upper thoracic spinal cord. The pTx portion is composed of eight dipoles to ensure high homogeneity over this large region of the spinal cord. The Rx portion is made up of twenty semiadaptable overlapping loops to produce high signal-to-noise ratio (SNR) across the patient population. The coil housing is designed to facilitate patient positioning and comfort, while also being tight fitting to ensure high sensitivity. We demonstrate RF shimming capabilities to optimize B1 + uniformity, power efficiency, and/or specific absorption rate efficiency. B1 + homogeneity, SNR, and g-factor were evaluated in adult volunteers and demonstrated excellent performance from the occipital lobe down to the T4-T5 level. We compared the proposed coil with two state-of-the-art head and head/neck coils, confirming its superiority in the cervical and upper thoracic regions of the spinal cord. This coil solution therefore provides a convincing platform for producing the high image quality necessary for clinical and research scanning of the upper spinal cord.


Assuntos
Medula Cervical , Adulto , Humanos , Medula Cervical/diagnóstico por imagem , Imagens de Fantasmas , Desenho de Equipamento , Imageamento por Ressonância Magnética/métodos , Razão Sinal-Ruído
6.
Cell Rep ; 42(5): 112526, 2023 05 30.
Artigo em Inglês | MEDLINE | ID: mdl-37195863

RESUMO

Vocalizations play an important role in the daily life of primates and likely form the basis of human language. Functional imaging studies have demonstrated that listening to voices activates a fronto-temporal voice perception network in human participants. Here, we acquired whole-brain ultrahigh-field (9.4 T) fMRI in awake marmosets (Callithrix jacchus) and demonstrate that these small, highly vocal New World primates possess a similar fronto-temporal network, including subcortical regions, that is activated by the presentation of conspecific vocalizations. The findings suggest that the human voice perception network has evolved from an ancestral vocalization-processing network that predates the separation of New and Old World primates.


Assuntos
Callithrix , Vocalização Animal , Animais , Humanos , Vocalização Animal/fisiologia , Percepção Auditiva/fisiologia , Imageamento por Ressonância Magnética , Encéfalo
7.
Magn Reson Med ; 90(2): 615-623, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-37036384

RESUMO

PURPOSE: The expanded encoding model incorporates spatially- and time-varying field perturbations for correction during reconstruction. To date, these reconstructions have used the conjugate gradient method with early stopping used as implicit regularization. However, this approach is likely suboptimal for low-SNR cases like diffusion or high-resolution MRI. Here, we investigate the extent that ℓ 1 $$ {\ell}_1 $$ -wavelet regularization, or equivalently compressed sensing (CS), combined with expanded encoding improves trade-offs between spatial resolution, readout time and SNR for single-shot spiral DWI at 7T. The reconstructions were performed using our open-source graphics processing unit-enabled reconstruction toolbox, "MatMRI," that allows inclusion of the different components of the expanded encoding model, with or without CS. METHODS: In vivo accelerated single-shot spirals were acquired with five acceleration factors (R) (2×-6×) and three in-plane spatial resolutions (1.5, 1.3, and 1.1 mm). From the in vivo reconstructions, we estimated diffusion tensors and computed fractional anisotropy maps. Then, simulations were used to quantitatively investigate and validate the impact of CS-based regularization on image quality when compared to a known ground truth. RESULTS: In vivo reconstructions revealed improved image quality with retainment of small features when CS was used. Simulations showed that the joint use of the expanded encoding model and CS improves accuracy of image reconstructions (reduced mean-squared error) over the range of R investigated. CONCLUSION: The expanded encoding model and CS regularization are complementary tools for single-shot spiral diffusion MRI, which enables both higher spatial resolutions and higher R.


Assuntos
Algoritmos , Processamento de Imagem Assistida por Computador , Processamento de Imagem Assistida por Computador/métodos , Imagem de Difusão por Ressonância Magnética/métodos , Imageamento por Ressonância Magnética/métodos , Anisotropia
8.
NMR Biomed ; 36(8): e4928, 2023 08.
Artigo em Inglês | MEDLINE | ID: mdl-36939270

RESUMO

Infants and toddlers are a challenging population upon which to perform magnetic resonance imaging (MRI) of the brain, both in research and clinical settings. Because of the large range in head size during the early years of development, paediatric neuro-MRI requires a radiofrequency (RF) coil, or set of coils, that is tailored to head size to provide the highest image quality. Mitigating techniques must also be employed to reduce and correct for subject motion. This manuscript describes an RF coil with a tailored mechanical-electrical design that can adapt to the head size of 3-month-old infants to 3-year-old toddlers. The RF coil was designed with tight-fitting coil elements to improve the signal-to-noise ratio (SNR) in comparison with commercially available adult head coils, while simultaneously aiding in immobilization. The coil was designed without visual obstruction to facilitate an unimpeded view of the child's face and the potential application of camera or motion-tracking systems. Despite the lack of elements over the face, the paediatric coil produced higher SNR over most of the brain compared with adult coils, including more than twofold in the periphery. Acceleration rates of fourfold in each Cartesian direction could be achieved. High SNR allowed for short acquisition times through accelerated imaging protocols and reduced the probability of motion during a scan. Modification of the acquisition protocol, with immobilization of the head through the adjustable coil geometry, and subsequently being combined with a motion-tracking system, provides a compelling platform for scanning paediatric populations without sedation and with improved image quality.


Assuntos
Encéfalo , Imageamento por Ressonância Magnética , Adulto , Humanos , Pré-Escolar , Lactente , Criança , Imageamento por Ressonância Magnética/métodos , Razão Sinal-Ruído , Encéfalo/diagnóstico por imagem , Imagens de Fantasmas , Ondas de Rádio , Desenho de Equipamento
9.
bioRxiv ; 2023 Feb 09.
Artigo em Inglês | MEDLINE | ID: mdl-36798276

RESUMO

The quality of cervical spinal cord images can be improved by the use of tailored radiofrequency coil solutions for ultra-high field imaging; however, very few commercial and research 7 Tesla radiofrequency coils currently exist for the spinal cord, and in particular those with parallel transmit capabilities. This work presents the design, testing and validation of a pTx/Rx coil for the human neck and cervical/upper-thoracic spinal cord. The pTx portion is composed of 8 dipoles to ensure high homogeneity over this large region of the spinal cord. The Rx portion is made of 20 semi-adaptable overlapping loops to produce high Signal-to-noise ratio (SNR) across the patient population. The coil housing is designed to facilitate patient positioning and comfort, while being tight fitting to ensure high sensitivity. We demonstrate RF shimming capabilities to optimize B 1 + uniformity, power efficiency and/or specific absorption rate (SAR) efficiency. B 1 + homogeneity, SNR and g-factor was evaluated in adult volunteers and demonstrated excellent performance from the occipital lobe down to the T4-T5 level. We compared the proposed coil with two state-of-the-art head and head/neck coils, confirming its superiority in the cervical and upper-thoracic regions of the spinal cord. This coil solution therefore provides a convincing platform for producing the high image quality necessary for clinical and research scanning of the upper spinal cord.

10.
J Neurosci Methods ; 383: 109737, 2023 01 01.
Artigo em Inglês | MEDLINE | ID: mdl-36341968

RESUMO

BACKGROUND: The small common marmoset (Callithrix jacchus) is an ideal nonhuman primate for awake fMRI in ultra-high field small animal MRI scanners. However, it can often be challenging in task-based fMRI experiments to provide a robust stimulus within the MRI environment while using hardware (an RF coil and restraint system) that is compatible with awake imaging. NEW METHOD: Here we present an RF coil and restraint system that permits unimpeded access to an awake marmoset's head subsequent to immobilization, thereby permitting the setup of peripheral devices and stimuli proximal to the head. RESULTS: As an example application, an fMRI experiment probing whole-brain activation in response to marmoset vocalizations was conducted-this paradigm showed significant bilateral activation in the inferior colliculus, medial lateral geniculate nucleus, and auditory cortex. COMPARISON WITH EXISTING METHOD(S): The coil performance was evaluated and compared to a previously published restraint system with integrated RF coil. The image and temporal SNR were improved by up to 58 % and 27 %, respectively, in the peripheral cortex and by 30 % and 3 % in the centre of the brain. The restraint-system topology limited head motion to less than 100 µm of translation and 0.30° of rotation when measured over a 15-minute acquisition. CONCLUSIONS: The proposed hardware solution provides a versatile approach to awake-marmoset imaging and, as demonstrated, can facilitate task-based fMRI.


Assuntos
Callithrix , Imageamento por Ressonância Magnética , Animais , Callithrix/fisiologia , Imageamento por Ressonância Magnética/métodos , Vigília/fisiologia , Ondas de Rádio , Mapeamento Encefálico/métodos
11.
Magn Reson Med ; 89(4): 1401-1417, 2023 04.
Artigo em Inglês | MEDLINE | ID: mdl-36441743

RESUMO

PURPOSE: Introduce Shimming Toolbox ( https://shimming-toolbox.org), an open-source software package for prototyping new methods and performing static, dynamic, and real-time B0 shimming as well as B1 shimming experiments. METHODS: Shimming Toolbox features various field mapping techniques, manual and automatic masking for the brain and spinal cord, B0 and B1 shimming capabilities accessible through a user-friendly graphical user interface. Validation of Shimming Toolbox was demonstrated in three scenarios: (i) B0 dynamic shimming in the brain at 7T using custom AC/DC coils, (ii) B0 real-time shimming in the spinal cord at 3T, and (iii) B1 static shimming in the spinal cord at 7T. RESULTS: The B0 dynamic shimming of the brain at 7T took about 10 min to perform. It showed a 47% reduction in the standard deviation of the B0 field, associated with noticeable improvements in geometric distortions in EPI images. Real-time dynamic xyz-shimming in the spinal cord took about 5 min and showed a 30% reduction in the standard deviation of the signal distribution. B1 static shimming experiments in the spinal cord took about 10 min to perform and showed a 40% reduction in the coefficient of variation of the B1 field. CONCLUSION: Shimming Toolbox provides an open-source platform where researchers can collaborate, prototype and conveniently test B0 and B1 shimming experiments. Future versions will include additional field map preprocessing techniques, optimization algorithms, and compatibility across multiple MRI manufacturers.


Assuntos
Imageamento por Ressonância Magnética , Software , Imageamento por Ressonância Magnética/métodos , Encéfalo/diagnóstico por imagem , Algoritmos , Processamento de Imagem Assistida por Computador/métodos
12.
Commun Biol ; 5(1): 986, 2022 09 17.
Artigo em Inglês | MEDLINE | ID: mdl-36115876

RESUMO

Robust frontoparietal connectivity is a defining feature of primate cortical organization. Whether mammals outside the primate order, such as rodents, possess similar frontoparietal functional connectivity organization is a controversial topic. Previous work has primarily focused on comparing mice and rats to primates. However, as these rodents are nocturnal and terrestrial, they rely much less on visual input than primates. Here, we investigated the functional cortical organization of grey squirrels which are diurnal and arboreal, thereby better resembling primate ecology. We used ultra-high field resting-state fMRI data to compute and compare the functional connectivity patterns of frontal regions in grey squirrels (Sciurus carolinensis), rats (Rattus norvegicus), and marmosets (Callithrix jacchus). We utilized a fingerprinting analysis to compare interareal patterns of functional connectivity from seeds across frontal cortex in all three species. The results show that grey squirrels, but not rats, possess a frontoparietal connectivity organization that resembles the connectivity pattern of marmoset lateral prefrontal cortical areas. Since grey squirrels and marmosets have acquired an arboreal way of life but show no common arboreal ancestor, the expansion of the visual system and the formation of a frontoparietal connectivity architecture might reflect convergent evolution driven by similar ecological niches in primates and tree squirrels.


Assuntos
Callithrix , Sciuridae , Animais , Lobo Frontal/diagnóstico por imagem , Imageamento por Ressonância Magnética/métodos , Camundongos , Córtex Pré-Frontal
13.
Neuroimage ; 252: 119030, 2022 05 15.
Artigo em Inglês | MEDLINE | ID: mdl-35217206

RESUMO

The common marmoset (Callithrix jacchus) is quickly gaining traction as a premier neuroscientific model. However, considerable progress is still needed in understanding the functional and structural organization of the marmoset brain to rival that documented in longstanding preclinical model species, like mice, rats, and Old World primates. To accelerate such progress, we present the Marmoset Functional Brain Connectivity Resource (marmosetbrainconnectome.org), currently consisting of over 70 h of resting-state fMRI (RS-fMRI) data acquired at 500 µm isotropic resolution from 31 fully awake marmosets in a common stereotactic space. Three-dimensional functional connectivity (FC) maps for every cortical and subcortical gray matter voxel are stored online. Users can instantaneously view, manipulate, and download any whole-brain functional connectivity (FC) topology (at the subject- or group-level) along with the raw datasets and preprocessing code. Importantly, researchers can use this resource to test hypotheses about FC directly - with no additional analyses required - yielding whole-brain correlations for any gray matter voxel on demand. We demonstrate the resource's utility for presurgical planning and comparison with tracer-based neuronal connectivity as proof of concept. Complementing existing structural connectivity resources for the marmoset brain, the Marmoset Functional Brain Connectivity Resource affords users the distinct advantage of exploring the connectivity of any voxel in the marmoset brain, not limited to injection sites nor constrained by regional atlases. With the entire raw database (RS-fMRI and structural images) and preprocessing code openly available for download and use, we expect this resource to be broadly valuable to test novel hypotheses about the functional organization of the marmoset brain.


Assuntos
Callithrix , Vigília , Acesso à Informação , Animais , Encéfalo/fisiologia , Callithrix/fisiologia , Humanos , Imageamento por Ressonância Magnética/métodos , Camundongos , Ratos
14.
Magn Reson Med ; 87(5): 2551-2565, 2022 05.
Artigo em Inglês | MEDLINE | ID: mdl-34932225

RESUMO

PURPOSE: To develop an RF coil with an integrated commercial field camera for ultrahigh field (7T) neuroimaging. The RF coil would operate within a head-only gradient coil and be subject to the corresponding design constraints. The RF coil can thereafter be used for subject-specific correction of k-space trajectories-notably in gradient-sensitive sequences such as single-shot spiral imaging. METHODS: The transmit and receive performance was evaluated before and after the integration of field probes, whereas field probes were evaluated when in an optimal configuration external to the coil and after their integration. Diffusion-weighted EPI and single-shot spiral acquisitions were employed to evaluate the efficacy of correcting higher order field perturbations and the consequent effect on image quality. RESULTS: Field probes had a negligible effect on RF-coil performance, including the transmit efficiency, transmit uniformity, and mean SNR over the brain. Modest reductions in field-probe signal lifetimes were observed, caused primarily by nonidealities in the gradient and shim fields of the head-only gradient coil at the probe positions. The field-monitoring system could correct up to second-order field perturbations in single-shot spiral imaging. CONCLUSION: The integrated RF coil and field camera was capable of concurrent-field monitoring within a 7T head-only scanner and facilitated the subsequent correction of k-space trajectories during spiral imaging.


Assuntos
Imageamento por Ressonância Magnética , Ondas de Rádio , Encéfalo/diagnóstico por imagem , Desenho de Equipamento , Imageamento por Ressonância Magnética/métodos , Neuroimagem/métodos , Imagens de Fantasmas
15.
Nat Commun ; 12(1): 6608, 2021 11 16.
Artigo em Inglês | MEDLINE | ID: mdl-34785685

RESUMO

Social cognition is a dynamic process that requires the perception and integration of a complex set of idiosyncratic features between interacting conspecifics. Here we present a method for simultaneously measuring the whole-brain activation of two socially interacting marmoset monkeys using functional magnetic resonance imaging. MRI hardware (a radiofrequency coil and peripheral devices) and image-processing pipelines were developed to assess brain responses to socialization, both on an intra-brain and inter-brain level. Notably, the brain activation of a marmoset when viewing a second marmoset in-person versus when viewing a pre-recorded video of the same marmoset-i.e., when either capable or incapable of socially interacting with a visible conspecific-demonstrates increased activation in the face-patch network. This method enables a wide range of possibilities for potentially studying social function and dysfunction in a non-human primate model.


Assuntos
Encéfalo/fisiologia , Callithrix/fisiologia , Imageamento por Ressonância Magnética/métodos , Vigília , Animais , Encéfalo/diagnóstico por imagem , Mapeamento Encefálico , Neurociência Cognitiva , Face , Feminino , Humanos , Processamento de Imagem Assistida por Computador , Imageamento por Ressonância Magnética/instrumentação , Masculino
16.
NMR Biomed ; 34(3): e4457, 2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-33305466

RESUMO

Many neuroscience applications have adopted functional MRI as a tool to investigate the healthy and diseased brain during the completion of a task. While ultra-high-field MRI has allowed for improved contrast and signal-to-noise ratios during functional MRI studies, it remains a challenge to create local radiofrequency coils that can accommodate an unobstructed visual field and be suitable for routine use, while at the same time not compromise performance. Performance (both during transmission and reception) can be improved by using close-fitting coils; however, maintaining sensitivity over the whole brain often requires the introduction of coil elements proximal to the eyes, thereby partially occluding the subject's visual field. This study presents a 7 T head coil, with eight transmit dipoles and 32 receive loops, that is designed to remove visual obstructions from the subject's line of sight, allowing for an unencumbered view of visual stimuli, the reduction of anxiety induced from small enclosures, and the potential for eye-tracking measurements. The coil provides a practical solution for routine imaging, including a split design (anterior and posterior halves) that facilitates subject positioning, including those with impaired mobility, and the placement of devices required for patient comfort and motion reduction. The transmit and receive coils displayed no degradation of performance due to adaptions to the design topology (both mechanical and electrical) required to create an unobstructed visual field. All computer-aided design files, electromagnetic simulation models, transmit field maps and local specific absorption rate matrices are provided to promote reproduction.


Assuntos
Ondas de Rádio , Campos Visuais/fisiologia , Simulação por Computador , Cabeça , Humanos , Imagens de Fantasmas , Razão Sinal-Ruído , Marcadores de Spin
17.
Proc Natl Acad Sci U S A ; 117(35): 21681-21689, 2020 09 01.
Artigo em Inglês | MEDLINE | ID: mdl-32817555

RESUMO

With the medial frontal cortex (MFC) centrally implicated in several major neuropsychiatric disorders, it is critical to understand the extent to which MFC organization is comparable between humans and animals commonly used in preclinical research (namely rodents and nonhuman primates). Although the cytoarchitectonic structure of the rodent MFC has mostly been conserved in humans, it is a long-standing question whether the structural analogies translate to functional analogies. Here, we probed this question using ultra high field fMRI data to compare rat, marmoset, and human MFC functional connectivity. First, we applied hierarchical clustering to intrinsically define the functional boundaries of the MFC in all three species, independent of cytoarchitectonic definitions. Then, we mapped the functional connectivity "fingerprints" of these regions with a number of different brain areas. Because rats do not share cytoarchitectonically defined regions of the lateral frontal cortex (LFC) with primates, the fingerprinting method also afforded the unique ability to compare the rat MFC and marmoset LFC, which have often been suggested to be functional analogs. The results demonstrated remarkably similar intrinsic functional organization of the MFC across the species, but clear differences between rodent and primate MFC whole-brain connectivity. Rat MFC patterns of connectivity showed greatest similarity with premotor regions in the marmoset, rather than dorsolateral prefrontal regions, which are often suggested to be functionally comparable. These results corroborate the viability of the marmoset as a preclinical model of human MFC dysfunction, and suggest divergence of functional connectivity between rats and primates in both the MFC and LFC.


Assuntos
Vias Neurais/fisiologia , Córtex Pré-Frontal/fisiologia , Animais , Evolução Biológica , Encéfalo/fisiologia , Mapeamento Encefálico/métodos , Callithrix/anatomia & histologia , Conectoma/métodos , Feminino , Lobo Frontal/anatomia & histologia , Lobo Frontal/fisiologia , Substância Cinzenta/fisiologia , Humanos , Imageamento por Ressonância Magnética/métodos , Masculino , Vias Neurais/anatomia & histologia , Córtex Pré-Frontal/anatomia & histologia , Ratos , Ratos Wistar
18.
NMR Biomed ; 33(11): e4387, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-32749022

RESUMO

The magnetization-prepared two-rapid-gradient-echo (MP2RAGE) sequence is used for structural T1 -weighted imaging and T1 mapping of the human brain. In this sequence, adiabatic inversion RF pulses are commonly used, which require the B1+ magnitude to be above a certain threshold. Achieving this threshold in the whole brain may not be possible at ultra-high fields because of the short RF wavelength. This results in low-inversion regions especially in the inferior brain (eg cerebellum and temporal lobes), which is reflected as regions of bright signal in MP2RAGE images. This study aims at eliminating the low-inversion-efficiency induced artifacts in MP2RAGE images at 7 T. The proposed technique takes advantage of parallel RF transmission systems by splitting the brain into two overlapping slabs and calculating the complex weights of transmit channels (ie RF shims) on these slabs for excitation and inversion independently. RF shims were calculated using fast methods implemented in the standard workflow. The excitation RF pulse was designed to obtain slabs with flat plateaus and sharp edges. These slabs were joined into a single volume during the online image reconstruction. The two-slab strategy naturally results in a signal-to-noise ratio loss; however, it allowed the use of independent shims to make the B1+ field exceed the adiabatic threshold in the inferior brain, eliminating regions of low inversion efficiency. Accordingly, the normalized root-mean-square errors in the inversion were reduced to below 2%. The two-slab strategy was found to outperform subject-specific kT -point inversion RF pulses in terms of inversion error. The proposed strategy is a simple yet effective method to eliminate low-inversion-efficiency artifacts; consequently, MP2RAGE-based, artifact-free T1 -weighted structural images were obtained in the whole brain at 7 T.


Assuntos
Algoritmos , Artefatos , Encéfalo/diagnóstico por imagem , Imageamento por Ressonância Magnética , Ondas de Rádio , Meios de Contraste/química , Humanos
19.
Cereb Cortex ; 30(11): 5943-5959, 2020 10 01.
Artigo em Inglês | MEDLINE | ID: mdl-32556184

RESUMO

The common marmoset (Callithrix jacchus) is a New World primate that is becoming increasingly popular as a preclinical model. To assess functional connectivity (FC) across the marmoset brain, resting-state functional MRI (RS-fMRI) is often performed under isoflurane anesthesia to avoid the effects of motion, physiological stress, and training requirements. In marmosets, however, it remains unclear how isoflurane anesthesia affects patterns of FC. Here, we investigated the effects of isoflurane on FC when delivered with either medical air or 100% pure oxygen, two canonical methods of inhalant isoflurane anesthesia delivery. The results demonstrated that when delivered with either medical air or 100% oxygen, isoflurane globally decreased FC across resting-state networks that were identified in awake marmosets. Generally, although isoflurane globally decreased FC in resting-state networks, the spatial structure of the networks was preserved. Outside of the context of RS networks, we indexed pair-wise functional connectivity between regions across the brain and found that isoflurane substantially altered interhemispheric and thalamic FC. Taken together, these findings indicate that RS-fMRI under isoflurane anesthesia is useful to evaluate the global structure of functional networks, but may obfuscate important nodes of some network components when compared to data acquired in fully awake marmosets.


Assuntos
Anestésicos Inalatórios/farmacologia , Encéfalo/efeitos dos fármacos , Isoflurano/farmacologia , Vias Neurais/efeitos dos fármacos , Descanso , Vigília , Animais , Encéfalo/fisiologia , Callithrix , Feminino , Imageamento por Ressonância Magnética , Masculino , Vias Neurais/fisiologia , Descanso/fisiologia , Vigília/fisiologia
20.
Neuroimage ; 215: 116815, 2020 07 15.
Artigo em Inglês | MEDLINE | ID: mdl-32278898

RESUMO

An object that is looming toward a subject or receding away contains important information for determining if this object is dangerous, beneficial or harmless. This information (motion, direction, identity, time-to-collision, size, velocity) is analyzed by the brain in order to execute the appropriate behavioral responses depending on the context: fleeing, freezing, grasping, eating, exploring. In the current study, we performed ultra-high-field functional MRI (fMRI) at 9.4T in awake marmosets to explore the patterns of brain activation elicited by visual stimuli looming toward or receding away from the monkey. We found that looming and receding visual stimuli activated a large cortical network in frontal, parietal, temporal and occipital cortex in areas involved in the analysis of motion, shape, identity and features of the objects. Looming stimuli strongly activated a network composed of portions of the pulvinar, superior colliculus, putamen, parietal, prefrontal and temporal cortical areas. These activations suggest the existence of a network that processes visual stimuli looming toward peripersonal space to predict the consequence of these stimuli. Together with previous studies in macaque monkeys, these findings indicate that this network is preserved across Old and New World primates.


Assuntos
Encéfalo/fisiologia , Percepção de Forma/fisiologia , Imageamento por Ressonância Magnética/métodos , Percepção de Movimento/fisiologia , Vias Visuais/fisiologia , Vigília/fisiologia , Animais , Encéfalo/diagnóstico por imagem , Callithrix , Masculino , Estimulação Luminosa/métodos , Tempo de Reação/fisiologia , Vias Visuais/diagnóstico por imagem
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