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1.
Structure ; 26(9): 1166-1167, 2018 09 04.
Artigo em Inglês | MEDLINE | ID: mdl-30184479

RESUMO

RNAs are relatively difficult to crystallize because many sequence variants must be tested to obtain suitable crystal contacts. In this issue of Structure, Shoffner et al. (2018) report an in crystallo selection procedure that allows for the rapid generation of new RNA crystal contacts.


Assuntos
RNA
2.
J Biol Chem ; 288(30): 22141-9, 2013 Jul 26.
Artigo em Inglês | MEDLINE | ID: mdl-23760279

RESUMO

The ends of linear chromosomes are extended by telomerase, a ribonucleoprotein complex minimally consisting of a protein subunit called telomerase reverse transcriptase (TERT) and the telomerase RNA (TER). TERT functions by reverse transcribing a short template region of TER into telomeric DNA. Proper assembly of TERT and TER is essential for telomerase activity; however, a detailed understanding of how TERT interacts with TER is lacking. Previous studies have identified an RNA binding domain (RBD) within TERT, which includes three evolutionarily conserved sequence motifs: CP2, CP, and T. Here, we used site-directed hydroxyl radical probing to directly identify sites of interaction between the TERT RBD and TER, revealing that the CP2 motif is in close proximity to a conserved region of TER known as the template boundary element (TBE). Gel shift assays on CP2 mutants confirmed that the CP2 motif is an RNA binding determinant. Our results explain previous work that established that mutations to the CP2 motif of TERT and to the TBE of TER both permit misincorporation of nucleotides into the growing DNA strand beyond the canonical template. Taken together, these results suggest a model in which the CP2 motif binds the TBE to strictly define which TER nucleotides can be reverse transcribed.


Assuntos
Proteínas de Protozoários/metabolismo , RNA de Protozoário/metabolismo , RNA/metabolismo , Telomerase/metabolismo , Tetrahymena thermophila/enzimologia , Motivos de Aminoácidos/genética , Sequência de Bases , Sítios de Ligação/genética , Eletroforese em Gel de Poliacrilamida , Ensaio de Desvio de Mobilidade Eletroforética , Modelos Moleculares , Dados de Sequência Molecular , Mutação , Conformação de Ácido Nucleico , Motivos de Nucleotídeos/genética , Ligação Proteica , Estrutura Terciária de Proteína , Proteínas de Protozoários/química , Proteínas de Protozoários/genética , RNA/química , RNA/genética , RNA de Protozoário/química , RNA de Protozoário/genética , Telomerase/química , Telomerase/genética , Moldes Genéticos , Tetrahymena thermophila/genética , Tetrahymena thermophila/metabolismo
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