Vertical distribution and acoustic characteristics of deep water micronektonic crustacean in the Bay of Biscay.

Vertical distribution of meso- and bathypelagic crustacean are scarcely known. The logistics involved in their studies hinder an adequate assessment of their role in the deep ecosystems. As a result, the literature on zooplankton scattering models is mainly focused on epipelagic organisms, particularly krill species. This study analyses data of the plankton community classified by family from the surface down to 2000 m taken in the Bay of Biscay, but focusses on the meso- and bathypelagic zone. Photographic data was employed to obtain a micronektonic crustacean shape catalogue. The Distorted Wave Born Approximation (DWBA) model was employed to estimate target strength. Pasiphaeidae, Euphausiidae and Acanthephyridae were mainly distributed above 500 m depth, while Benthesicymidae, Sergestidae and Mysidae were concentrated in the lower mesopelagic to upper bathypelagic area. The most abundant species were Euphausiidae and Benthesicymidae with up to 30 and 40 individuals per cubic meter respectively. Standard length ranged from 8 to 85 mm and was significantly related with height but not with depth. The Pasiphaeidae family presented the largest individuals followed by Acanthephyridae and Sergestidae while Euphausiidae, Benthesicymidae, and Mysidae were shorter. An smooth fluid-like response was estimated for shorter organisms, while individuals of 60 mm or higher present TS oscillations from around 60 kHz. Pasiphaeidae present an almost 10 dB higher TS than Sergestidae, Acanthephyridae and Benthesicymidae while Mysidae followed by Euphausiidae produce the lower TS. Simple models of TS values at broadside versus the logarithm of standard length (SL) that can be employed as an approximation of their scattering are provided for four common frequencies (TS = 58.5*log10(SL)-188.7, TS = 57.03*log10(SL)-174.1, TS = 22.48*log10(SL)-157.14, TS = 17.55*log10(SL)-135 and TS = 10.53*log10(SL)-109 at 18, 38, 70, 120 and 200 kHz respectively). Changes in body density and sound speed contrast may increase by 10 or 2 dB the resulting TS respectively but are constant in phase, while orientation can decrease the TS by up to 20 dB at the higher frequencies and alter the spectra to an almost flat trend. This study provides further insight into the vertical distribution and physical characteristics of the micronektonic crustacean families inhabiting the Bay of Biscay down to 2000 m depth. It also estimates their echo from a real-shape catalogue that can be employed to infer knowledge from acoustic recordings, particularly of the lower mesopelagic and the bathypelagic zones.

Spatio-temporal patterns of northern gannet abundance in a migratory and wintering area.

In marine ecosystems, seabird populations are well monitored, thus allowing their use as indicators of system fluctuations at multiple spatio-temporal scales. Population abundance estimates are essential features of any conservation and management measures and initiatives. Population abundances can be used to delineate the distribution range and foraging grounds of species during both breeding and non-breeding periods, with multi-annual monitoring allowing for the inspection of the temporal variability within key marine areas. Taking advantage of long-term monitoring schemes, we examined the annual abundance patterns of the northern gannet Morus bassanus in its southern European migratory flyway. Here, the presence of a topographical feature (i.e. a submarine canyon system) could influence physical processes (e.g. upwelling, alongshore currents, and riverine inputs), thus oceanographically differentiating canyon and shelf ecosystems within a spatially restricted marine area. We assessed seasonal and long-term trend fluctuations of monthly northern gannet abundance using Generalized Additive Mixed Models, yielding only a strong seasonal effect. Moreover, we jointly tested the effect of the phenology and the spatial domain (canyon versus shelf) on northern gannet abundance using Generalised Linear Mixed Models, accounting for the excess of zeros. Northern gannet abundance was higher during the pre-winter and post-winter migration, corresponding to its southward and northward movements in the NE Atlantic, respectively. The effect of the canyon was only detected during the post-winter migration. By age, adult northern gannets were more abundant in some periods of the year (from October to March, including the pre-winter migration, the wintering and the post-winter migration), whereas juveniles and immatures were especially abundant during the pre-winter period. Our results could provide quantitative baseline information of northern gannet spatio-temporal patterns in a migratory and wintering area important for both research and conservation efforts, given the high conservation value of the area within the Natura 2000 network.

Multiclass support vector machines with example-dependent costs applied to plankton biomass estimation.

In many applications, the mistakes made by an automatic classifier are not equal, they have different costs. These problems may be solved using a cost-sensitive learning approach. The main idea is not to minimize the number of errors, but the total cost produced by such mistakes. This brief presents a new multiclass cost-sensitive algorithm, in which each example has attached its corresponding misclassification cost. Our proposal is theoretically well-founded and is designed to optimize cost-sensitive loss functions. This research was motivated by a real-world problem, the biomass estimation of several plankton taxonomic groups. In this particular application, our method improves the performance of traditional multiclass classification approaches that optimize the accuracy.