Evolutionary Analysis of a Parrot Bornavirus 2 Detected in a Sulphur-Crested Cockatoo (Cacatua galerita) Suggests a South American Ancestor.

Parrot bornavirus (PaBV) is an RNA virus that causes Proventricular Dilatation Disease (PDD), neurological disorders, and death in Psittaciformes. Its diversity in South America is poorly known. We examined a Cacatua galerita presenting neuropathies, PDD, and oculopathies as the main signs. We detected PaBV through reverse transcription polymerase chain reaction (RT-PCR) and partial sequencing of the nucleoprotein (N) and matrix (M) genes. Maximum likelihood and Bayesian phylogenetic inferences classified it as PaBV-2. The nucleotide identity of the sequenced strain ranged from 88.3% to 90.3% against genotype PaBV-2 and from 80.2% to 84.4% against other genotypes. Selective pressure analysis detected signs of episodic diversifying selection in both the N and M genes. No recombination events were detected. Phylodynamic analysis estimated the time to the most recent common ancestor (TMRCA) as the year 1758 for genotype PaBV-2 and the year 1049 for the Orthobornavirus alphapsittaciforme species. Substitution rates were estimated at 2.73 × 10-4 and 4.08 × 10-4 substitutions per year per site for N and M, respectively. The analysis of population dynamics showed a progressive decline in the effective population size during the last century. Timescale phylogeographic analysis revealed a potential South American ancestor as the origin of genotypes 1, 2, and 8. These results contribute to our knowledge of the evolutionary origin, diversity, and dynamics of PaBVs in South America and the world. Additionally, it highlights the importance of further studies in captive Psittaciformes and the potential impact on endangered wild birds.

Detection of aves polyomavirus 1 (APyV) and beak and feather disease virus (BFDV) in exotic and native Brazilian Psittaciformes.

There are several viral diseases in captive birds. Aves polyomavirus 1 (APyV) and beak and feather disease virus (BFDV) are among the most important in Psittaciformes. The occurrence of these agents has been widely described in various parts of the world; however, little is known about these viruses in South America. APyV and BFDV can cause high morbidity with feather alterations and even mortality. Other variable symptoms could appear depending on the host's age and taxonomic group. The aim of this study was to detect APyV and BFDV in samples of captive exotic and native Psittaciformes in Brazil. Samples from 120 birds with clinical signs compatible with APyV and/or BFDV were examined. In total, 57 (47.5%) positive birds were found, of which 21 (17.5%) had APyV and 41 (34.17%) had BFDV. Five animals (4.17%) presented concurrent infection. Phylogenetic analysis showed a divergent APyV strain and a diversity of Brazilian BFDV strains. Our study shows that these viruses are present at a significant frequency in captive exotic and native Psittaciformes in Brazil. This study also highlights the need for constant epidemiologic surveillance to preserve bird biodiversity with a focus on endangered Psittaciformes species.

Detection and Molecular Characterization of a Natural Coinfection of Marek's Disease Virus and Reticuloendotheliosis Virus in Brazilian Backyard Chicken Flock.

Marek's disease virus (MDV) and the reticuloendotheliosis virus (REV) are two of the primary oncogenic viruses that significantly affect chickens. In Brazil, there have been no previous published reports on the presence of field REV alone or in coinfection. This retrospective study analyzes samples from a case of lymphoproliferative lesions from a backyard chicken flock. MDV and REV were detected by PCR and classified as MDV1 and REV3, respectively, through sequencing and phylogenetic analysis based on the glycoprotein B (gB) genes for MDV and the polymerase (pol) and envelope (env) genes for REV. Real-time PCR reactions were performed for MDV to rule out the presence of the Rispens vaccine strain. This is the first report of the presence of REV in coinfection with a MDV clinical case in Brazil and the first molecular characterization of REV in South America. This study highlights the importance of molecular diagnosis for REV and MDV in poultry. In addition, this study highlights the distribution of these two viruses worldwide and the latent risk of them solely or in coinfection to this part of the world.

Detection of Avian Bornavirus in Wild and Captive Passeriformes in Brazil.

Avian bornaviruses (ABVs) are the causative agents of proventricular dilatation disease (PDD), a fatal neurologic disease considered to be a major threat to psittacine bird populations. We performed a reverse transcription PCR survey to detect the presence of canary avian bornavirus (CnBV) in birds of order Passeriformes related to different clinical manifestations, such as sudden death, neurologic signs, apathy, anorexia, excessive beak growth, and PDD. A total of 227 samples from captive and wild canaries were included, of which 80 samples were captive birds, comprising saffron finches (n = 71) and common canary (n = 9), and 147 samples were wild birds distributed among a variety of several species. Two samples from captive birds (2/80) were positive for ABV, and in wild birds, only one sample was positive for ABV. The positive samples were subjected to DNA sequencing, and only the CnBV-1 serotype was found, which was the first time it was detected outside of Germany (Austria/Hungary), where it was first detected in 2009. Phylogenetic analysis confirmed that avian bornavirus serotype CnBV-1 is present in order Passeriformes in Brazil.

Detección de bornavirus aviar en aves paseriformes silvestres y en cautiverio en Brasil. Los bornavirus aviares (ABV, por sus siglas en inglés) son los agentes causantes de la enfermedad de la dilatación proventricular (PDD), una enfermedad neurológica mortal considerada como una de las principales amenazas para las poblaciones de aves psitácidas. Se realizó un muestreo por transcrpción reversa y PCR para detectar la presencia de bornavirus de los canarios (CnBV) en aves de orden Passeriformes relacionadas con diferentes manifestaciones clínicas, como muerte súbita, signos neurológicos, apatía, anorexia, crecimiento excesivo del pico y enfermedad de dilatación proventricular. Se incluyeron un total de 227 muestras de canarios en cautividad y silvestres, de las cuales 80 muestras fueron de aves en cautiverio, incluyendo jilgueros dorados (n =71) y canarios comunes (n = 9) y 147 muestras fueron aves silvestres distribuidas entre una variedad de especies. Dos muestras de aves cautivas (2/80) fueron positivas para bornavirus aviar; en aves silvestres, solo una muestra fue positiva para bornavirus aviar. Las muestras positivas se sometieron a secuenciación de ADN y solo se encontró el bornavirus de canarios serotipo 1, que es la primera vez que se detecta fuera de Alemania (Austria/Hungría), donde se detectó por primera vez en el año 2009. El análisis filogenético confirmó que el bornavirus de canarios serotipo 1 está presente en el orden Passeriformes en Brasil.

Survey of bornaviruses in pet psittacines in Brazil reveals a novel parrot bornavirus.

Avian bornaviruses are the causative agents of proventricular dilatation disease (PDD), a fatal neurological disease considered to be a major threat to psittacine bird populations. We performed a survey of the presence of avian bornaviruses and PDD in pet psittacines in Brazil and also studied PDD's clinical presentation as well as the genomic variability of the viruses. Samples from 112 psittacines with clinical signs compatible with PDD were collected and tested for the presence of bornaviruses. We found 32 birds (28.6%) positive for bornaviruses using reverse transcriptase polymerase chain reaction (RT-PCR). Twenty-one (65.6%) of the 32 bornavirus-positive birds presented neurological signs, seven (21.9%) presented undigested seeds in feces, four (12.5%) showed proventricular dilatation, six (18.8%) regurgitation, three (9.4%) feather plucking and three (9.4%) sudden death. The results confirm that avian bornaviruses are present in pet psittacines in Brazil, and sequence analysis identified a distinct virus, named parrot bornavirus 8 (PaBV-8).

Retrospective study of ocular disorders in Amazon parrots / Estudo retrospectivo das alterações oculares observadas em papagaios

A retrospective study was conducted to identify the occurrence and types of ocular disorders in 57 Amazon parrots admitted to the Ophthalmology Service, Veterinary Teaching Hospital, School of Veterinary Medicine, University of São Paulo, Brazil from 1997 to 2006. The most frequent observed disorder was cataracts, present in 24 of the 114 examined eyes (57 parrots). Uveitis, ulcerative keratitis and keratoconjunctivitis were frequently diagnosed as well. The cornea was the most affected ocular structure, with 28 reported disorders. Uveal disorders also were commonly observed. Conjunctiva and eyelid disorders were diagnosed in lower frequency. Results suggest that cataracts are common and that cornea, lens and uvea are the most affected ocular structures in Amazon parrots.

Realizou-se estudo retrospectivo para identificar a ocorrência e os tipos de alterações oculares observadas em 57 papagaios atendidos no Serviço de Oftalmologia do Hospital Veterinário da Faculdade de Medicina Veterinária e Zootecnia da Universidade de São Paulo (USP), de 1997-2006. Catarata em diferentes estágios de evolução foi a alteração ocular mais frequentemente diagnosticada, sendo observada em 24 dos 114 olhos examinados. Uveíte, ceratite ulcerativa e ceratoconjuntivite foram também diagnosticadas. A córnea foi a estrutura ocular mais acometida (28 registros). Alterações uveais foram frequentemente observadas. Alterações das pálpebras e conjuntiva foram observadas em menor freqüência. Concluí-se que catarata foi a alteração mais frequentemente observada e que a córnea, lente e úvea são as estruturas oculares mais susceptíveis a alterações em papagaios.