Emergence of a Low-Energy Peak in the Smoothed Absolute Value Circular Dichroism Spectra of Small Helical Gold Nanorods.

We calculate, using time-dependent density functional theory, absorption and circular dichroism (CD) spectra for a series of small helical gold nanorod structures with a width of 0.6 nm and length increasing from 0.7 nm for Au24 to 1.9 nm for Au56. For a low-energy window, ranging from 1.7 to 4.1 eV, broadening the lines in the absorption spectra results in a low energy peak which previous studies have identified as the (localized) plasmon resonance. As expected, the absorption peak position of the plasmon resonance systematically redshifts as the length of the nanorod increases. However, trends in the CD and straightforwardly broadened CD spectra are more difficult to discern. We introduce the idea of an absolute value CD spectrum and show that broadening the lines results in a low energy peak that has not previously been reported. The peak position systematically redshifts as the length of the nanorod increases but over a significantly smaller range than that for the absorption spectrum.

Engineering magic number Au19 and Au20 cage structures using electron withdrawing atoms.

Gold cages are a subset of gold nanoparticles and these structures are of major interest due to their favourable physiochemical properties. In order for these structures to be useful in applications, they must be chemically stable. The objective of this research is to transform non-magic number cage structures into magic number cage structures by the addition of electron-withdrawing groups on the cages. The electronic properties for Au19X and Au20X2 (X = F, Cl, Br, I) are calculated and observed. It is expected that the electron-withdrawing groups will remove the electron density from the gold cages and leave them positively charged. We first optimize the geometries of the initial gold cages and verify the structures are a local minima. From there, we attach our halogens to the gold cages and optimize the structures to determine the NICS values and HOMO-LUMO gaps. NICS values were found to be more negative when a more electronegative halogen was used. Calculations have found that Au19F and Au20F2 have the most negative NICS values, indicating greater spherical aromaticity. Iodine, being the least electronegative atom, had the most positive NICS value and smallest HOMO-LUMO gap. All calculations are compared to the magic cluster Au18 which satisfies Hirsh's 2(N + 1)2 rule for n = 2.

Triskelion Structured Colloidal Quantum Dots.

We show, using density functional theory and ab initio molecular dynamics, that certain small colloidal quantum dots with a mixed nanocrystal core capped with achiral surface ligands spontaneously form a triskelion (from the Greek, three-legged) structure with (approximate) C3 symmetry that can be dynamically stable at room temperature when additionally capped with small amine ligands. Furthermore, the nanocrystal core also forms a triskelion structure. The focus of our study is a colloidal quantum dot with a Cd16Se7Te3 core (and a charge of +12) capped with negatively charged surface ligands to achieve charge neutrality-in the simplest instance, 12 Cl--to form the colloidal quantum dot Cd16Se7Te3Cl12. The small size of the core (for which almost all atoms are surface atoms), the high positive charge that destabilizes the core, the mixed (Cd/Te) composition that creates mechanical strain in the core, and the inclusion of precisely three Te atoms in the predominantly Se core all play critical roles in the spontaneous formation of the triskelion structure.

Bonding and metastability for Group 12 dications.

Electronic structure and bonding properties of the Group 12 dications M2 2+ (M = Zn, Cd, Hg) are investigated and electron density-derived quantities are used to characterize the metastability of these species. Of particular interest are the complementary descriptions afforded by the Laplacian of the electron density ∇2 ρ(r) and the one-electron Bohm quantum potential (Q = ∇ 2 ρ r / 2 ρ r ) along the bond path. Further, properties derived from the pair density including the localization-delocalization matrices (LDMs) and the interacting quantum atoms (IQA) energies are analyzed within the framework of the quantum theory of atoms in molecules (QTAIM). From the crossing points of the singlet (ground) and triplet (excited) potential energy curves, the barriers for dissociation (BFD) are estimated to be 25.2 kcal/mol (1.09 eV) for Zn2 2+ , 22.8 kcal/mol (0.99 eV) for Cd2 2+ , and 26.4 kcal/mol (1.14 eV) for Hg2 2+ . For comparison and benchmarking purposes, the case of N2 2+ is considered as a texbook example of metastability. At the equilibrium geometries, LDMs, which are used here as an electronic fingerprinting tool, discriminate and group together Group 12 M2 2+ from its isoelectronic Group 11 M2 . While "classical" bonding indices are inconclusive in establishing regions of metastability in the bonding, it is shown that the one-electron Bohm quantum potential is promising in this regard.

Stabilization of Columnar Liquid Crystal Phases via Arene-Perfluoroarene Interactions.

We report the synthesis of novel polycatenar dibenzopentacenequinones 1 and 2 that are designed to form columnar liquid crystalline phases. The mesomorphic properties of these compounds were investigated by polarized optical microscopy, differential scanning calorimetry, and powder X-ray diffraction. While compound 1 exhibits two distinct columnar mesophases between 148 and 177 °C, fluorinated 2 exhibits a columnar mesophase from 121 to 336 °C. This dramatic stabilization of the columnar mesophase of 2 can be attributed to improved π-stacking as a result of arene-perfluoroarene interactions.

(Meta-)stability and Core-Shell Dynamics of Gold Nanoclusters at Finite Temperature.

Gold nanoclusters have been the focus of numerous computational studies, but an atomistic understanding of their structural and dynamical properties at finite temperature is far from satisfactory. To address this deficiency, we investigate gold nanoclusters via ab initio molecular dynamics, in a range of sizes where a core-shell morphology is observed. We analyze their structure and dynamics using state-of-the-art techniques, including unsupervised machine-learning nonlinear dimensionality reduction (sketch-map) for describing the similarities and differences among the range of sampled configurations. In the examined temperature range between 300 and 600 K, we find that whereas the gold nanoclusters exhibit continuous structural rearrangement, they are not amorphous. Instead, they clearly show persistent motifs: a cationic core of 1-5 atoms is loosely bound to a shell which typically displays a substructure resulting from the competition between locally spherical versus planar fragments. Besides illuminating the properties of core-shell gold nanoclusters, the present study proposes a set of useful tools for understanding their nature in operando.

Iron doped gold cluster nanomagnets: ab initio determination of barriers for demagnetization.

Magnetic properties of small- and nano-sized iron doped gold clusters are calculated at the level of second order multireference perturbation theory. We first assess the methodology for small Au6Fe and Au7Fe clusters, which are representative of even and odd electron count systems. We find that larger active spaces are needed for the odd electron count system, Au7Fe, which exhibits isotropic magnetization behaviour. On the other hand, the even electron count system, Au6Fe, exhibits strong axial magnetic anisotropy. We then apply this methodology to the tetrahedral and truncated pyramidal nano-sized Au19Fe (with S = 3/2) and Au18Fe (with S = 2) clusters. We find that face substitutions result in the most stable structures, followed by edge and corner substitutions. However, for Au18Fe, corner substitution results in strong magnetic anisotropy and a large barrier for demagnetization while face substitution does not. Thus, although corner and face substituted Au18Fe have the same spin, only corner substituted Au18Fe can act as a single nanoparticle magnet.

Helical gold nanorods as chiral recognition nanostructures: a relativistic density functional theory study.

We establish helical gold nanorods as the first examples of chiral recognition nanostructures by examining the simple chiral molecule CClHDT adsorbed on the helical Au40 nanorod. We calculate the vibrational circular dichroism (VCD) spectra of the R and S enantiomers of CClHDT adsorbed on the R (or S) enantiomer of Au40 using relativistic density functional theory. The highest adsorption energy is found when the Cl atom of CClHDT binds to a low-coordinated Au atom at the edge of Au40. There are three adsorption modes (essentially identical in energy) corresponding to three orientations of the HDT moiety. We show that, for each adsorption mode, the VCD spectra are distinctly different for the Au40(R)-ClHDT(R) and Au40(R)-CClHDT(S) complexes, and we give a qualitative explanation for this based on the principle of chirality transfer. For comparison with the results for Au40, we calculate the VCD spectra of the R and S enantiomers of CClHDT adsorbed on the achiral Au20 tetrahedral cluster. Again, there are three adsorption modes (essentially identical in energy) corresponding to three orientations of the HDT moiety. However, we show that, for each adsorption mode, the VCD spectra are mirror symmetric but otherwise essentially identical for the Au20-CClHDT(R) and Au20-CClHDT(S) complexes. Thus, the inherent chirality of the helical Au40 nanorod is essential for its chiral recognition functionality.

Density functional theory calculations on the complexation of p-arsanilic acid with hydrated iron oxide clusters: structures, reaction energies, and transition states.

Aromatic organoarsenicals, such as p-arsanilic acid (pAsA), are still used today as feed additives in the poultry and swine industries in developing countries. Through the application of contaminated litter as a fertilizer, these compounds enter the environment and interact with reactive soil components such as iron and aluminum oxides. Little is known about these surface interactions at the molecular level. We report density functional theory (DFT) calculations on the energies, optimal geometries, and vibrational frequencies for hydrated pAsA/iron oxide complexes, as well as changes in Gibbs free energy, enthalpy, and entropy for various types of ligand exchange reactions leading to both inner- and outer-sphere complexes. Similar calculations using arsenate are also shown for comparison, along with activation barriers and transition state geometries between inner-sphere complexes. Minimum energy calculations show that the formation of inner- and outer-sphere pAsA/iron oxide complexes is thermodynamically favorable, with the monodentate mononuclear complexes being the most favorable. Interatomic As-Fe distances are calculated to be between 3.3 and 3.5 Å for inner-sphere complexes and between 5.2 and 5.6 Å for outer-sphere complexes. In addition, transition state calculations show that activation energies greater than 23 kJ/mol are required to form the bidentate binuclear pAsA/iron oxide complexes, and that formation of arsenate bidentate binuclear complexes is thermodynamically -rather than kinetically- driven. Desorption thermodynamics using phosphate ions show that reactions are most favorable using HPO4(2-) species. The significance of our results for the overall surface complexation mechanism of pAsA and arsenate is discussed.

Formation of chlorinated species through reaction of SO2 with NaClO2 powder and their role in the oxidation of NO and Hg°.

This study examines gaseous chlorinated species generated from the reaction of sulfur dioxide (SO2) with sodium chlorite powder (NaClO2(s)) to obtain insight into the propensity of this process to enhance NO and Hg° oxidation. A packed bed reactor containing NaClO2(s) was used and the reaction temperature was set to 130 °C. Initially, we determined that the presence of SO2 enhances the oxidation of NO and Hg° by reaction with NaClO2(s). We then introduced NO2 into the gas mixture as a radical scavenger and determined that the chlorinated species generated by the reaction of SO2 with NaClO2(s) are OClO, Cl, ClO, and Cl2. Based on these results, we suggest that such gaseous chlorinated ones are responsible for the enhancement of NO and Hg° oxidation.

Investigations of strong hydrogen bonding in (ROH)n...FHF- (n = 1, 2 and R = H, CH3, C2H5) clusters via high-pressure mass spectrometry and quantum calculations.

An examination of strong hydrogen bonds found in (ROH)(n)...FHF(-) clusters (n = 1 and 2; R = H, CH(3), C(2)H(5)) is presented. Excellent agreement is observed between thermochemical values obtained from high-pressure mass spectrometric measurements and those predicted from MP2(full)/6-311++G(d,p)//B3LYP/6-311++G(d,p) calculations. Calculated structures are examined, and insight into the geometric nature of the bonding for these systems is obtained. In the case of water binding to FHF(-), it was found that the large entropic advantage of one particular structure, which was not the most enthalpically favored, was significant enough to make it the predominant species within the ion source. In the case of methanol solvation, no evidence of secondary interaction of the methyl group and any other moiety could be found. The structural details revealed from calculations of the ethanol-solvated clusters indicate that secondary interactions between the terminal methyl group and FHF(-) have an impact on the length of the FHF and OHF bonds.