An assessment of US microbiome research.

Genome-enabled technologies have supported a dramatic increase in our ability to study microbial communities in environments and hosts. Taking stock of previously funded microbiome research can help to identify common themes, under-represented areas and research priorities to consider moving forward. To assess the status of US microbiome research, a team of government scientists conducted an analysis of federally funded microbiome research. Microbiomes were defined as host-, ecosystem- or habitat-associated communities of microorganisms, and microbiome research was defined as those studies that emphasize community-level analyses using 'omics technologies. Single pathogen, single strain and culture-based studies were not included, except symbiosis studies that served as models for more complex communities. Fourteen governmental organizations participated in the data call. The analysis examined three broad research themes, eight environments and eight microbial categories. Human microbiome research was larger than any other environment studied, and the basic biology research theme accounted for half of the total research activities. Computational biology and bioinformatics, reference databases and biorepositories, standardized protocols and high-throughput tools were commonly identified needs. Longitudinal and functional studies and interdisciplinary research were also identified as needs. This study has implications for the funding of future microbiome research, not only in the United States but beyond.

La Crosse Virus Field Detection and Vector Competence of Culex Mosquitoes.

La Crosse virus (LACV), a leading cause of arboviral pediatric encephalitis in the United States, is emerging in Appalachia. Here, we report field and laboratory evidence that suggest LACV may be using Culex mosquitoes as additional vectors in this region. This bunyavirus was detected by reverse-transcriptase polymerase chain reaction in two pools of Culex mosquitoes in southwestern Virginia and in six pools in West Virginia. To assess vector competence, we offered LACV blood meals to field-collected Culex restuans Theobald, Cx. pipiens L., and Aedes triseriatus (Say). Both Culex species were susceptible to infection. LACV-positive salivary expectorate, indicative of the ability to transmit, was detected in a small proportion of Cx. restuans (9%) and Cx. pipiens (4%) compared with Ae. triseriatus (40%). In a companion study of Cx. restuans only, we found that adults derived from nutritionally stressed larvae were significantly more likely to disseminate and transmit LACV. Our results indicate a potential role of Culex spp. in LACV dynamics that should be explored further in endemic areas.

La Crosse Virus in Aedes japonicus japonicus mosquitoes in the Appalachian Region, United States.

La Crosse virus (LACV), a leading cause of arboviral encephalitis in children in the United States, is emerging in Appalachia. For local arboviral surveillance, mosquitoes were tested. LACV RNA was detected and isolated from Aedes japonicus mosquitoes. These invasive mosquitoes may significantly affect LACV range expansion and dynamics.

Morbidity and mortality of bald eagles (Haliaeetus leucocephalus) and peregrine falcons (Falco peregrinus) admitted to the Wildlife Center of Virginia, 1993-2003.

Medical records from 111 threatened bald eagles (86%, Haliaeetus leucocephalus) and peregrine falcons (14%, Falco peregrinus) admitted to the Wildlife Center of Virginia from 1993 to 2003 were reviewed to identify submitters, causes of morbidity and mortality, and final disposition. Half of all patients admitted were submitted by the Virginia Department of Game and Inland Fisheries personnel. Trauma was the most common reason for presentation in bald eagles (70%) and peregrine falcons (81%). Additional causes of morbidity and mortality in bald eagles included toxicoses (10%), infectious diseases (8%), and orphaned young (1%). Neoplasia was confirmed in two trauma cases, suggesting underlying disease might have increased susceptibility to acute traumatic injuries. Peregrine falcons were also admitted for infectious disease (19%). The most frequent infectious disease for both species was West Nile virus. Thirty-nine percent of patients were released back into the wild, 28% were euthanized, 20% died, and 13% were placed in captivity. Postrelease monitoring that would determine whether rehabilitated animals survived to contribute to threatened populations was not performed in this study.

Complications associated with conjoined intramedullary pin placement for femorotibial joint luxation in a Solomon Island eclectus parrot (Eclectus roratus solomonensis).

Femorotibial joint-luxation repair with conjoined intramedullary pins has been successfully used in pediatric psittacine birds. However, there are no reports of complications associated with its use in adults. In this report, we describe the clinical presentation, surgical reduction, and postoperative complications associated with stifle-luxation repair in an adult female Solomon Island eclectus parrot (Eclectus roratus solomonensis). The normal perching angle for the eclectus stifle was determined before surgery. Osteomyelitis was treated systemically and locally. Midfemoral amputation was performed as a salvage procedure, without an apparent reduction in the quality of the bird's life.