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1.
Heliyon ; 10(11): e31900, 2024 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-38841447

RESUMO

Commercial microalgae cultivation is a dynamic field with ongoing efforts to improve efficiency, reduce costs, and explore new applications. We conducted a study to examine how different light exposure periods affect Chlorella vulgaris's growth. We employed a Phyto tank batch system of approximately 3.5 L with LED light control, controlled airflow, and sterilized bags, maintained at 22.0 ± 2.0 °C indoors. Various methods, including spectrophotometry, and cell counter were employed to monitor Chlorella vulgaris growth under different light exposure cycles. Additionally, quality analysis as feed source was employed by proximate, amino acid, beta-glucan, and microbial content analysis. The results revealed significant variations in C. vulgaris biomass production based on light exposure duration. Notably, the 16:8-h light-dark photoperiod exhibited the highest biomass concentration, reaching 6.48 × 107 ± 0.50 cells/mL with an optical density (OD) of 1.165 absorbance at 682 nm. The 12:12-h light-dark photoperiod produced the second-highest biomass concentration, with 2.305 × 106 ± 0.60 cells/mL at an OD of 0.489. Proximate analysis of dry algae powder revealed low lipid content (0.48 %), high protein content (37.61 %), variable ash concentration (average 10.75 %), and a significant carbohydrate fraction (51.16 %) during extended daylight and shorter dark periods. Amino acid analysis identified nine essential amino acids, with glutamic acid being the most abundant (17.7 %) and methionine the least (0.4 %). Furthermore, quality analysis and microbiological assays demonstrated that the C. vulgaris biomass is well-suited for fish and livestock use as a feed source and possibility as human nutraceuticals. These findings can be considered more environmentally friendly and ethically sound due to the absence of genetic modification.

2.
Heliyon ; 10(4): e25880, 2024 Feb 29.
Artigo em Inglês | MEDLINE | ID: mdl-38384579

RESUMO

The current study assessed the hypolipidemic effect and modulation of hepatic enzymes by different edible oils in obese Wistar rats. In order to conduct this study, 36 Wistar rats that were collected at 5 weeks of age and weighed an average of 70 g were split into two groups: 28 of them were fed a high-fat diet (HFD) and 8 of them were fed a control diet. After 5 weeks of feeding, rats from the HFD (obese, n = 4) and the control diet group (n = 4) were sacrificed. Subsequently, the rest of obese rats (n = 24) were separated into six groups, including the continuing high-fat (CHF) diet group, rice bran oil (RBO) diet group, olive oil (OO) diet group, soybean oil (SO) diet group, cod liver oil (CLO) diet group, and sunflower oil (SFO) diet group, and the continuing control diet group (n = 4). Rats from each group were sacrificed following an additional 5 weeks, and all analytical tests were carried out. The results found that the interventions of RBO, CLO, and SFO in obese rats reduced their body weight non-significantly when compared with CHF. It was also observed that a non-significant reduction in weight of the heart, AAT, and EAT occurred by RBO, OO, SO, and CLO, while SFO reduced the AAT level significantly (p < 0.05). Besides, RBO, OO, SO, CLO, and SFO decreased IBAT and liver fat significantly compared to CHF. Similarly, the administration of RBO, OO, SO, and CLO reduced ALT significantly. RBO reduced GGT (p < 0.05) significantly, but other oils did not. The given oil has the efficiency to reduce TC, TAG, and LDL-C but increase HDL-C significantly. These findings suggest that different edible oils can ameliorate obesity, regulate lipid profiles, and modulate hepatic enzymes.

3.
Neurotrauma Rep ; 4(1): 598-604, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37731648

RESUMO

The study aims to explore the demographic and clinical characteristics of persons with spinal cord injury (SCI) in Bangladesh. A total of 3035 persons with SCI spanning from 2018 to 2022 were included in this cross-sectional study. Information about demographic and clinical variables was obtained from the medical records and verified through telephone calls to ensure accuracy and consistency. Approximately half (48.30%) of the study participants were located in Dhaka Division. The average age of persons with SCI was 38.3 years, with a standard deviation of 15.9 years, and the largest proportion (33.4%) fell within the age range of 18-30 years. Males outnumbered females by nearly 2.5 times. In the study, 59.6% had suffered traumatic injuries, whereas 40.4% had SCI attributable to disease-related causes; 58.1% were diagnosed with tetraplegia and 40.1% with paraplegia. Fall from height (42.1%) and road traffic trauma (27%) were the most common causes of traumatic injuries. Degenerative myelopathy (41.1%) was the most frequent cause of non-traumatic SCI, followed by tumors (27.7%) and tuberculosis (TB; 14.8%). Both traumatic (58.3%) and degenerative (56.7%) causes of SCI commonly affected the cervical spine, whereas TB (24.4%) and tumors (47.5%) had a higher incidence of affecting the dorsal spine. In the absence of a registry or national database for patients with SCI in Bangladesh, this study would serve as representative data for future studies.

4.
Nepal J Epidemiol ; 13(2): 1268-1284, 2023 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-37692909

RESUMO

Indian subcontinent has high mental heath burden and low resources to cope the mental health challenges. Assessment of impact of COVID-19 pandemic on the mental health would help to prioritize the resource allocations. We aimed to assess the impact of COVID-19 on the mental health of people in the Indian subcontinent. Following the PRISMA 2020 guideline, a scoping review was performed by systematically searching the PubMed, Scopus, and Embase databases to identify original studies that assessed mental health conditions during the COVID-19 pandemic in the Indian subcontinent. In this review, a total of 34 studies conducted between 2020 and 2022 were analyzed. The prevalence of anxiety disorders was found to range widely, from 2.5% in North Indian urban slum to 53% in Bangladesh and 21.7% in Pakistan. Similarly, the prevalence of depression varied widely, with rates ranging from 3.5% in North India to 29.8% in Pakistan. The prevalence of stress-related problems ranged from 18.3% in Pakistan to 59.7% in Bangladesh. Factors such as female gender, married status, healthcare workers, and mental illness were identified as important predictors of anxiety and depressive disorders. The impact of COVID-19 pandemic on mental health in Indian subcontinent varies widely based on study population and methods. Therefore, a cautious interpretation is needed while generalizing the study results.

5.
Heliyon ; 9(6): e16815, 2023 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-37346325

RESUMO

Due to the growing demand, assessing performance has become obligatory for photovoltaic (PV) energy harvesting systems. Performance assessment involves estimating different PV system parameters. Traditional ways, such as calculating solar radiation using satellite data and the IV characteristics approach as assessment methods, are no longer reliable enough to provide a reasonable projection of PV system parameters. Estimating system parameters using machine learning (ML) approaches has become a reliable and popular method because of its speed and accuracy. This paper systematically reviewed ML-based PV parameter estimation studies published in the last three years (2020 - 2022). Studies were analyzed using several criteria, including ML algorithm, outcome, experimental setup, sample data size, and error metric. The analysis revealed several interesting factors. The neural network was the most popular ML method (32.55%), followed by random vector functional link (13.95%) and support vector machine (9.30%). Dataset was sourced from hardware tests and computer-based simulations: 66% of the studies used data from only computer simulation, 18% used data from only hardware setup, and the 16% experiments used data from both hardware and simulations to evaluate different system parameters. The top three most commonly used error metrics were root mean square error (29.1%), mean absolute error (17.5%), and coefficient of determination (15.9%). Our systematic review will help researchers assess ML algorithms' projection in PV system parameters estimation. Consequently, scopes shall be created to establish more robust governmental frameworks, expand private financing in the PV industry, and optimize PV system parameters.

7.
Front Cell Dev Biol ; 11: 1049131, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36910145

RESUMO

RAB23 is a small GTPase which functions at the plasma membrane to regulate growth factor signaling. Mutations in RAB23 cause Carpenter syndrome, a condition that affects normal organogenesis and patterning. In this study, we investigate the role of RAB23 in musculoskeletal development and show that it is required for patella bone formation and for the maintenance of tendon progenitors. The patella is the largest sesamoid bone in mammals and plays a critical role during movement by providing structural and mechanical support to the knee. Rab23 -/- mice fail to form a patella and normal knee joint. The patella is formed from Sox9 and scleraxis (Scx) double-positive chondroprogenitor cells. We show that RAB23 is required for the specification of SOX9 and scleraxis double-positive patella chondroprogenitors during the formation of patella anlagen and the subsequent establishment of patellofemoral joint. We find that scleraxis and SOX9 expression are disrupted in Rab23 -/- mice, and as a result, development of the quadriceps tendons, cruciate ligaments, patella tendons, and entheses is either abnormal or lost. TGFß-BMP signaling is known to regulate patella initiation and patella progenitor differentiation and growth. We find that the expression of TGFßR2, BMPR1, BMP4, and pSmad are barely detectable in the future patella site and in the rudimentary tendons and ligaments around the patellofemoral joint in Rab23 -/- mice. Also, we show that GLI1, SOX9, and scleraxis, which regulate entheses establishment and maturation, are weakly expressed in Rab23 -/- mice. Further analysis of the skeletal phenotype of Rab23 -/- mice showed a close resemblance to that of Tgfß2 -/- mice, highlighting a possible role for RAB23 in regulating TGFß superfamily signaling.

8.
J Immunol Res ; 2023: 2274415, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36874624

RESUMO

Background: Although the monkeypox virus-associated illness was previously confined to Africa, recently, it has started to spread across the globe and become a significant threat to human lives. Hence, this study was designed to identify the B and T cell epitopes and develop an epitope-based peptide vaccine against this virus's cell surface binding protein through an in silico approach to combat monkeypox-associated diseases. Results: The analysis revealed that the cell surface binding protein of the monkeypox virus contains 30 B cell and 19 T cell epitopes within the given parameter. Among the T cell epitopes, epitope "ILFLMSQRY" was found to be one of the most potential peptide vaccine candidates. The docking analysis revealed an excellent binding affinity of this epitope with the human receptor HLA-B∗15:01 with a very low binding energy (-7.5 kcal/mol). Conclusion: The outcome of this research will aid the development of a T cell epitope-based peptide vaccine, and the discovered B and T cell epitopes will facilitate the creation of other epitope and multi-epitope-based vaccines in the future. This research will also serve as a basis for further in vitro and in vivo analysis to develop a vaccine that is effective against the monkeypox virus.


Assuntos
Epitopos de Linfócito T , Monkeypox virus , Humanos , Proteínas de Membrana , Vacinas de Subunidades Antigênicas , Linfócitos B
9.
Mar Pollut Bull ; 189: 114804, 2023 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-36924691

RESUMO

Understanding the vertical distribution of heavy metals aids in tracing the contamination history, however, it is limited for mangrove-dominated river. Thus, this study aimed to assess the vertical distribution of nine heavy metals and their possible ecological risk in several layers of core sediments from a mangrove-dominated river inside the Sundarban mangrove forest (World heritage and Ramsar site), Bangladesh. 45 core samples from five stations were analyzed using Flame Atomic Absorption Spectrophotometer (FAAS). The findings showed that, with the exception of Fe, Ni, and Cu, which suggested increased metal release in recent times, higher metal levels were recorded in the surface layer (0-10 cm), followed by the middle layer (10-20 cm), and inner layer (20-30 cm) of sediment cores. When compared to non-industrial forest sediment, core sediment from industrial sites contained noticeably more metals (p < 0.05). Overall, the mean metal concentration (mg/kg) followed the increasing order of Cd < As < Pb < Cu < Cr < Zn < Ni < Mn < Fe. Among the studied metals, the levels of Cd and Ni exceeded the average shale value. Contamination indices such as enrichment factor (EF), contamination factor (CF), and geo-accumulation index (Igeo) showed that the studied sediments were only contaminated by Cd. Ecological risk assessed by ecological risk factor (Eri) and risk index (RI) suggested that the analyzed heavy metals, with the exception of Cd, posed no significant ecological threats. All of the heavy metals analyzed might have originated from similar anthropogenic sources, according to the correlation matrix, cluster analysis (CA), and principal component analysis (PCA).


Assuntos
Metais Pesados , Poluentes Químicos da Água , Rios , Cádmio/análise , Sedimentos Geológicos/análise , Monitoramento Ambiental , Poluentes Químicos da Água/análise , Metais Pesados/análise , Medição de Risco , China
10.
BMC Bioinformatics ; 24(1): 7, 2023 Jan 06.
Artigo em Inglês | MEDLINE | ID: mdl-36609221

RESUMO

BACKGROUND: With the global spread of COVID-19, the world has seen many patients, including many severe cases. The rapid development of machine learning (ML) has made significant disease diagnosis and prediction achievements. Current studies have confirmed that omics data at the host level can reflect the development process and prognosis of the disease. Since early diagnosis and effective treatment of severe COVID-19 patients remains challenging, this research aims to use omics data in different ML models for COVID-19 diagnosis and prognosis. We used several ML models on omics data of a large number of individuals to first predict whether patients are COVID-19 positive or negative, followed by the severity of the disease. RESULTS: On the COVID-19 diagnosis task, we got the best AUC of 0.99 with our multilayer perceptron model and the highest F1-score of 0.95 with our logistic regression (LR) model. For the severity prediction task, we achieved the highest accuracy of 0.76 with an LR model. Beyond classification and predictive modeling, our study founds ML models performed better on integrated multi-omics data, rather than single omics. By comparing top features from different omics dataset, we also found the robustness of our model, with a wider range of applicability in diverse dataset related to COVID-19. Additionally, we have found that omics-based models performed better than image or physiological feature-based models, proving the importance of the omics-based dataset for future model development. CONCLUSIONS: This study diagnoses COVID-19 positive cases and predicts accurate severity levels. It lowers the dependence on clinical data and professional judgment, by leveraging the utilization of state-of-the-art models. our model showed wider applicability across different omics dataset, which is highly transferable in other respiratory or similar diseases. Hospital and public health care mechanisms can optimize the distribution of medical resources and improve the robustness of the medical system.


Assuntos
Teste para COVID-19 , COVID-19 , Humanos , COVID-19/diagnóstico , Aprendizado de Máquina , Redes Neurais de Computação , Modelos Logísticos
11.
Biomed Res Int ; 2022: 4302625, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36105928

RESUMO

Background: Worldwide, Neisseria gonorrhoeae-related sexually transmitted infections (STIs) continue to be of significant public health concern. This obligate-human pathogen has developed a number of defenses against both innate and adaptive immune responses during infection, some of which are mediated by the pathogen's proteins. Hence, the uncharacterized proteins of N. gonorrhoeae can be annotated to get insight into the unique functions of this organism related to its pathogenicity and to find a more efficient therapeutic target. Methods: In this study, a hypothetical protein (HP) of N. gonorrhoeae was chosen for analysis and an in-silico approach was used to explore various properties such as physicochemical characteristics, subcellular localization, secondary structure, 3D structures, and functional annotation of that HP. Finally, a molecular docking analysis was performed to design an epitope-based vaccine against that HP. Results: This study has identified the potential role of the chosen HP of N. gonorrhoeae in plasmid transfer, cell cycle control, cell division, and chromosome partitioning. Acidic nature, thermal stability, cytoplasmic localization of the protein, and some of its other physicochemical properties have also been identified through this study. Molecular docking analysis has demonstrated that one of the T cell epitopes of the protein has a significant binding affinity with the human leukocyte antigen HLA-B∗15 : 01. Conclusions: The in-silico characterization of this protein will help us understand molecular mechanism of action of N. gonorrhoeae and get an insight into novel therapeutic identification processes. This research will, therefore, enhance our knowledge to find new medications to tackle this potential threat to humankind.


Assuntos
Gonorreia , Neisseria gonorrhoeae , Epitopos de Linfócito T , Gonorreia/tratamento farmacológico , Humanos , Imunidade Humoral , Simulação de Acoplamento Molecular , Neisseria gonorrhoeae/genética
12.
Gut Microbes ; 14(1): 2096995, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35866234

RESUMO

The human intestine hosts diverse microbial communities that play a significant role in maintaining gut-skin homeostasis. When the relationship between gut microbiome and the immune system is impaired, subsequent effects can be triggered on the skin, potentially promoting the development of skin diseases. The mechanisms through which the gut microbiome affects skin health are still unclear. Enhancing our understanding on the connection between skin and gut microbiome is needed to find novel ways to treat human skin disorders. In this review, we systematically evaluate current data regarding microbial ecology of healthy skin and gut, diet, pre- and probiotics, and antibiotics, on gut microbiome and their effects on skin health. We discuss potential mechanisms of the gut-skin axis and the link between the gut and skin-associated diseases, such as psoriasis, atopic dermatitis, acne vulgaris, rosacea, alopecia areata, and hidradenitis suppurativa. This review will increase our understanding of the impacts of gut microbiome on skin conditions to aid in finding new medications for skin-associated diseases.


Assuntos
Microbioma Gastrointestinal , Microbiota , Probióticos , Dermatopatias , Disbiose/terapia , Humanos , Prebióticos , Probióticos/uso terapêutico , Pele , Dermatopatias/terapia
13.
Comput Biol Med ; 146: 105657, 2022 07.
Artigo em Inglês | MEDLINE | ID: mdl-35672170

RESUMO

Alzheimer's disease (AD) is the leading cause of dementia globally, with a growing morbidity burden that may exceed diagnosis and management capabilities. The situation worsens when AD patient fatalities are exposed to COVID-19. Because of differences in clinical features and patient condition, a patient's recovery from COVID-19 with or without AD varies greatly. Thus, this situation stimulates a spectrum of imbalanced data. The inclusion of different features in the class imbalance offers substantial problems for developing of a classification framework. This study proposes a framework to handle class imbalance and select the most suitable and representative datasets for the hybrid model. Under this framework, various state-of-the-art resample techniques were utilized to balance the datasets, and three sets of data were finally selected. We developed a novel hybrid deep learning model AD-CovNet using Long Short-Term Memory (LSTM) and Multi-layer Perceptron (MLP) algorithms that delineate three unique datasets of COVID-19 and AD-COVID-19 patient fatality predictions. This proposed model achieved 97% accuracy, 97% precision, 97% recall, and 97% F1-score for Dataset I; 97% accuracy, 97% precision, 96% recall, and 96% F1-score for Dataset II; and 86% accuracy, 88% precision, 88% recall, and 86% F1-score for Dataset III. In addition, AdaBoost, XGBoost, and Random Forest models were utilized to evaluate the risk factors associated with AD-COVID-19 patients, and the outcome outperformed diagnostic performance. The risk factors predicted by the models showed significant clinical importance and relevance to mortality. Furthermore, the proposed hybrid model's performance was evaluated using a statistical significance test and compared to previously published works. Overall, the uniqueness of the large dataset, the effectiveness of the deep learning architecture, and the accuracy and performance of the hybrid model showcase the first cohesive work that can formulate better predictions and help in clinical decision-making.


Assuntos
Doença de Alzheimer , COVID-19 , Aprendizado Profundo , Humanos , Redes Neurais de Computação , Fatores de Risco
14.
Diabetol Metab Syndr ; 14(1): 18, 2022 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-35090536

RESUMO

BACKGROUND: Association of single nucleotide polymorphisms (SNP) rs7756992 A/G and rs7754840 G/C of cyclin-dependent kinase 5 regulatory subunit-associated protein 1-like 1 (CDKAL1) gene with the susceptibility of gestational diabetes mellitus (GDM) has been studied in a group of Bangladeshi women. METHODS: In this case-control study, 212 GDM patients and 256 control subjects were genotyped for rs7756992 and rs7754840 by PCR-RFLP and TaqMan™ allelic discrimination assay method respectively. Genotyping results were confirmed by DNA sequencing and replicated TaqMan™ assay. The odds ratios and their 95% confidence interval were calculated by logistic regression to determine the associations between genotypes and GDM. RESULTS: The genotype frequencies of rs7756992-AA/AG/GG in the GDM group and the control group were 37%/48%, 53%/45%, 10%/7% and those of rs7754840-CC/CG/GG were 51%/55%, 40.1%/39.8%, 9%/5% respectively. Under dominant and log additive models rs7756992 was revealed significantly associated with GDM after being adjusted for family history of diabetes (FHD) and gravidity. Conversely, rs7754840 was significantly associated (P = 0.047) with GDM only under the recessive model after the same adjustment. The risk allele frequency of both SNPs was higher in the GDM group but significantly (P = 0.029) increased prevalence was observed in the rs7756992 G allele. When positive FHD and risk alleles of these SNPs were synergistically present in any pregnant woman, the chance of developing GDM was augmented by many folds. The codominant model revealed 2.5 and 2.1 folds increase in odds by AG (rs7756992) and GC (rs7754840) genotypes and 3.7 and 4.5 folds by GG (rs7756992) and CC (rs7754840) genotypes respectively. A significant 2.7 folds (P = 0.038) increase in odds of GDM resulted from the interaction of rs7756992 and family history of diabetes under the dominant model. The cumulative effect of multigravidity and risk alleles of these SNPs increased the odds of GDM more than 1.5 folds in different genotypes. CONCLUSION: This study not only revealed a significant association between rs7756992 and rs7754840 with GDM but also provided the possibility as potential markers for foretelling about GDM and type 2 diabetes mellitus in Bangladeshi women.

15.
Nepal J Epidemiol ; 12(4): 1242-1247, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36741769

RESUMO

Knife crime has become a common phrase used by the media, but it is not always clear what it refers to or what they mean when they use the term. Knife crime can cover many offences, making it challenging to define and estimate its prevalence. This review aimed to evaluate potential knife crimes in the UK from 2011 to 2021 and analyse the causes and risk factors associated with the crimes. Six UK online news portals were purposefully chosen to be included in the study, and knife crime news was searched retrospectively. The term "knife crime" was used to search. The news portals were the: Metro, the Sun, the Guardian, Daily Mail, Daily Mirror and the Evening Standard. In the assigned news portals, 692 reports were found between January 2011 and December 2021. The study revealed that the 11-20 years of age group individuals are more vulnerable as victims, and males are more reported as victims when compared to females. About 61.8% of knife crimes are reported from South England. Knife crime risk is higher in early adulthood and among males. Street violence, fights/gang attacks, family issues and robbery are the leading causes of knife crime and have all been identified as risk factors that must be addressed with caution.

16.
Int J Food Sci ; 2021: 6627265, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34423026

RESUMO

Nowadays, the socioeconomic status has been changed a lot, so people are now more concerned about their life style and health. They have knowledge about the detrimental effects of synthetic products. That is why they are interested in natural products. Utilization of natural products of plant origin having fewer side effects has gained popularity over the years. There is immense scope for natural products that can intimate health benefits beyond traditional nutrients. Moringa oleifera is one such tree having tremendous nutritional and medicinal benefits. It is rich in macro- and micronutrients and other bioactive compounds which are important for normal functioning of the body and prevention of certain diseases. Leaves, flowers, seeds, and almost all parts of this tree are edible and have immense therapeutic properties including antidiabetic, anticancer, antiulcer, antimicrobial, and antioxidant. Most of the recent studies suggested that Moringa should be used as a functional ingredient in food. The aim of this review is to focus the use of Moringa oleifera as a potential ingredient in food products.

17.
Comput Ind Eng ; 157: 107249, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-36567962

RESUMO

The present Covid-19 pandemic causes disruptions to markets and businesses in general, affecting the supply chain inventory system most significantly. This work investigates a hybrid payment inventory model considering inflation, cash discount, price-sensitive demand, and preservation technology investment for non-instantaneous deteriorating products. Due to the economic downturn, a hybrid payment scheme composed of multiple prepayments and a delay in payment is proposed to facilitate post Covid-19 recovery. The proposed model is one of the first models to consider a hybrid payment scheme in view of the Covid-19 pandemic, and to provide guidelines to retailers in planning the selling price, replenishment period, and preservation investment in view of the pandemic situation. The hybrid payment policy is suggested during the financial crisis to sustain orders from a retailer to the supplier and from the consumers to the retailer. During the supply disruptions, two cases for shortages and without shortages are studied. The nonlinear model is solved by Lingo 17 software. This study shows the effect of advance and delayed payments on the retailer's total profit. It also shows that the total profit is extremely delicate to the inflation rate. The numerical examples illustrate the inventory model for different scenarios. Sensitivity analysis is carried out to provide managerial insights to management during post Covid-19 recovery.

18.
Cell Mol Biol (Noisy-le-grand) ; 66(7): 152-160, 2020 Oct 31.
Artigo em Inglês | MEDLINE | ID: mdl-33287935

RESUMO

With the advancement and development of sophisticated bioinformatics tools, the area of computational bioinformatics and systems biology analysis is expanding day by day. The bipolar or manic-depressive disorder might be characterized as one of the most crippling mental problems that affect the people of early age and grown-ups. The objective of the present study was to investigate the association between genetic mutations in the four above listed diseases and to create a Protein-protein interaction (PPI) network or common pathways. Firstly, we need to find out the genetic relationship between them. Thus it will help us to understand the genetic association between them and help to develop the drug design for all the diseases. Genes responsible for these diseases are gathered, pre-processed, processed and mining using python scripts. This exploration is expected to carry out further measurements in the field of drug structure and also contributes to the biological and biomedical sectors.


Assuntos
Transtorno Bipolar/tratamento farmacológico , Transtorno Bipolar/genética , Biologia Computacional , Descoberta de Drogas , Análise por Conglomerados , Interações Medicamentosas , Regulação da Expressão Gênica , Redes Reguladoras de Genes , Humanos , MicroRNAs/genética , MicroRNAs/metabolismo , Ligação Proteica , Mapas de Interação de Proteínas/genética , Fatores de Transcrição/metabolismo
19.
Elife ; 92020 07 14.
Artigo em Inglês | MEDLINE | ID: mdl-32662771

RESUMO

Mutations in the gene encoding Ras-associated binding protein 23 (RAB23) cause Carpenter Syndrome, which is characterized by multiple developmental abnormalities including polysyndactyly and defects in skull morphogenesis. To understand how RAB23 regulates skull development, we generated Rab23-deficient mice that survive to an age where skeletal development can be studied. Along with polysyndactyly, these mice exhibit premature fusion of multiple sutures resultant from aberrant osteoprogenitor proliferation and elevated osteogenesis in the suture. FGF10-driven FGFR1 signaling is elevated in Rab23-/-sutures with a consequent imbalance in MAPK, Hedgehog signaling and RUNX2 expression. Inhibition of elevated pERK1/2 signaling results in the normalization of osteoprogenitor proliferation with a concomitant reduction of osteogenic gene expression, and prevention of craniosynostosis. Our results suggest a novel role for RAB23 as an upstream negative regulator of both FGFR and canonical Hh-GLI1 signaling, and additionally in the non-canonical regulation of GLI1 through pERK1/2.


In many animals, the skull is made of several separate bones that are loosely joined during childhood and only fuse into one piece when the animal stops growing. A genetic disease called Carpenter syndrome causes the bones of the skull to fuse early in life, stopping it from growing correctly. Carpenter syndrome is often caused by changes to the gene responsible for making a protein called RAB23. RAB23 helps move other molecules and cell components between different parts of the cell, and is therefore involved in a number of cellular processes. Previous studies suggest that RAB23 has a role in many parts of the body during development. Yet, it is unclear which cells in the skull depend on RAB23 activity and how this protein is controlled. To answer this question, Hasan et al. grew pieces of developing skull bones that had been taken from mice lacking the RAB23 protein in the laboratory. Examining these samples revealed that RAB23 is active in cells called osteoblasts that add new bone to the edge of each piece of the skull as it grows. Hasan et al. also found that RAB23 regulates two cellular signaling pathways ­ called the hedgehog pathway and the fibroblast growth factor pathway ­ that interact with one another and co-ordinate skull development. These findings show how RAB23 controls the growth and fusion of skull bones in developing animals. This could improve our understanding of the role RAB23 plays in other processes during development. It also sheds light on the mechanisms of Carpenter syndrome which may inform new approaches for treating patients.


Assuntos
Embrião de Mamíferos/embriologia , Camundongos/embriologia , Osteogênese/genética , Proteínas rab de Ligação ao GTP/genética , Animais , Fator 10 de Crescimento de Fibroblastos/fisiologia , Sistema de Sinalização das MAP Quinases/fisiologia , Camundongos Endogâmicos C3H , Camundongos Endogâmicos C57BL , Proteína GLI1 em Dedos de Zinco/fisiologia , Proteínas rab de Ligação ao GTP/metabolismo
20.
Anal Biochem ; 554: 34-43, 2018 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-29870692

RESUMO

In this study, an amino-modified aptasensor using multi-walled carbon nanotubes (MWCNTs)-deposited ITO electrode was prepared and evaluated for the detection of pathogenic Salmonella bacteria. An amino-modified aptamer (ssDNA) which binds selectively to whole-cell Salmonella was immobilised on the COOH-rich MWCNTs to produce the ssDNA/MWCNT/ITO electrode. The morphology of the MWCNT before and after interaction with the aptamers were observed using scanning electron microscopy (SEM). Cyclic voltammetry and electrochemical impedance spectroscopy techniques were used to investigate the electrochemical properties and conductivity of the aptasensor. The results showed that the impedance measured at the ssDNA/MWCNT/ITO electrode surface increased after exposure to Salmonella cells, which indicated successful binding of Salmonella on the aptamer-functionalised surface. The developed ssDNA/MWCNT/ITO aptasensor was stable and maintained linearity when the scan rate was increased from 10 mV s-1 to 90 mV s-1. The detection limit of the ssDNA/MWCNT/ITO aptasensor, determined from the sensitivity analysis, was found to be 5.5 × 101 cfu mL-1 and 6.7 × 101 cfu mL-1 for S. Enteritidis and S. Typhimurium, respectively. The specificity test demonstrated that Salmonella bound specifically to the ssDNA/MWCNT/ITO aptasensor surface, when compared with non-Salmonella spp. The prepared aptasensor was successfully applied for the detection of Salmonella in food samples.


Assuntos
Técnicas Biossensoriais/métodos , Técnicas Eletroquímicas/métodos , Microbiologia de Alimentos , Salmonella/isolamento & purificação , Aptâmeros de Nucleotídeos , Técnicas Biossensoriais/estatística & dados numéricos , Técnicas Eletroquímicas/estatística & dados numéricos , Humanos , Microscopia Eletrônica de Varredura , Nanotubos de Carbono/ultraestrutura , Salmonella/genética , Salmonella/patogenicidade , Salmonella enteritidis/genética , Salmonella enteritidis/isolamento & purificação , Salmonella enteritidis/patogenicidade , Salmonella typhimurium/genética , Salmonella typhimurium/isolamento & purificação , Salmonella typhimurium/patogenicidade , Especificidade da Espécie
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