Demographic and Pathogens of Domestic, Free-Roaming Pets and the Implications for Wild Carnivores and Human Health in the San Luis Region of Costa Rica.

Habitat loss and degradation, restricted ranges, prey exploitation, and poaching are important factors for the decline of several wild carnivore populations and additional stress from infectious agents is an increasing concern. Given the rapid growth of human populations in some regions like Costa Rica, pathogens introduced, sustained, and transmitted by domestic carnivores may be particularly important. To better understand the significance of domestic carnivore pathogens for wildlife, we determine the prevalence of infection and possible mechanisms for contact between the two groups. The demographics, role in the household, and pathogens of pet dogs and cats was studied during three annual spay/neuter clinics in San Luis, Costa Rica. Most dogs were owned primarily as pets and guard animals, but ~10% were used for hunting. Cats were owned primarily as pets and for pest control. Both roamed freely outdoors. We detected high prevalences of some pathogens (e.g., carnivore protoparvovirus 1 and Toxoplasma gondii). Some pathogens are known to persist in the environment, which increases the probability of exposure to wild carnivores. This study demonstrated that domestic pets in San Luis, home to a number of protected and endangered wildlife species, are infected with pathogens to which these wild species are potentially susceptible. Additionally, results from our questionnaire support the potential for domestic and wild animal contact, which may result in disease spillover.

A novel Isospora species (Apicomplexa: Eimeriidae) from warblers (Passeriformes: Parulidae) of Costa Rica.

Five of 16 (31%) rufous-capped warblers (Basileuterus rufifrons) and 2 of 5 (40%) ovenbirds ( Seiurus aurocapilla ) sampled from Costa Rica were positive for a novel species of Isospora. Oocysts have a thin, smooth, double-layered, colorless wall and measure 22.3 µm ± 1.6 µm × 24.3 µm ± 1.5 µm (19-25 µm × 21-28 µm) with an average length-width (L/W) ratio of 1.0 (1-1.3). Oocyst residuum and micropyle are absent, but 0-4 spherical to cigar-shaped polar granules (1-2.5 µm) are present. Sporocysts are ovoid and measure 11.8 µm ± 0.9 µm × 16 µm ± 1.7 µm (10-14 µm × 12-19 µm) with an average L/W ratio of 1.6 (1.0-1.9). A knob-like Stieda body continuous with the sporocyst wall and a trapezoidal compartmentalized substieda body are present. Each sporocyst contained 4 sporozoites and a diffuse sporocyst residuum consisting of many variable-sized granules, some as large as 2 µm. This is the second description of an Isospora species in New World warblers (Passeriformes: Parulidae) and the first report of Isospora from both the rufous-capped warbler and ovenbird.

Coffee agroforests remain beneficial for neotropical bird community conservation across seasons.

Coffee agroforestry systems and secondary forests have been shown to support similar bird communities but comparing these habitat types are challenged by potential biases due to differences in detectability between habitats. Furthermore, seasonal dynamics may influence bird communities differently in different habitat types and therefore seasonal effects should be considered in comparisons. To address these issues, we incorporated seasonal effects and factors potentially affecting bird detectability into models to compare avian community composition and dynamics between coffee agroforests and secondary forest fragments. In particular, we modeled community composition and community dynamics of bird functional groups based on habitat type (coffee agroforest vs. secondary forest) and season while accounting for variation in capture probability (i.e. detectability). The models we used estimated capture probability to be similar between habitat types for each dietary guild, but omnivores had a lower capture probability than frugivores and insectivores. Although apparent species richness was higher in coffee agroforest than secondary forest, model results indicated that omnivores and insectivores were more common in secondary forest when accounting for heterogeneity in capture probability. Our results largely support the notion that shade-coffee can serve as a surrogate habitat for secondary forest with respect to avian communities. Small coffee agroforests embedded within the typical tropical countryside matrix of secondary forest patches and small-scale agriculture, therefore, may host avian communities that resemble those of surrounding secondary forest, and may serve as viable corridors linking patches of forest within these landscapes. This information is an important step toward effective landscape-scale conservation in Neotropical agricultural landscapes.

Evaluation of a restriction fragment length enzyme assay for differentiation of Haemoproteus and Plasmodium across a standard region of the mitochondrial genome.

Avian hemosporidian parasites are a genetically diverse group of parasites with a near cosmopolitan distribution. Over the past 2 decades, several PCR protocols have been designed to detect these parasites. The majority of these protocols amplify part of or the entire mitochondrial cytochrome b gene. However, many of these protocols co-amplify 2 genera (Haemoproteus and Plasmodium), making it impossible to determine which genus is amplified without post-PCR analysis. A uniform database (MalAvi), containing sequences amplified with the primers HAEMF and HAEMR2, has been developed to increase comparability across studies. We analyzed sequences from the MalAvi database and new sequences and found that digestion with EcoRV could be used to distinguish Haemoproteus from the majority of Plasmodium sequences. In addition, we tested 220 wild birds from Costa Rica and the United States for avian hemosporidians and assessed the ability of EcoRV to distinguish these 2 genera. Thirty-six positive samples were sequenced to confirm the restriction profiles, and we also analyzed 63 new hemosporidian sequences from ongoing studies in the United States for the restriction site. Among these new samples, all of the 85 Haemoproteus (subgenus Parahaemoproteus) and 14 Plasmodium were distinguishable. Overall, 887 of 898 (98.8%) sequences from our studies and the MalAvi database were assigned to the correct genus. Of these samples, all Haemoproteus samples were correctly identified and all but 11 Plasmodium samples were correctly identified by the EcoRV assay. Overall, this restriction enzyme protocol is able to quickly and efficiently classify these 2 genera of avian malarial parasites and would be useful for researchers interested in identifying parasites to genus-level, studies focused on sequence analysis of only a single genus, or for detecting co-infections that would need cloning prior to sequence analysis.

Do shade-grown coffee plantations pose a disease risk for wild birds?

Shade-grown coffee plantations are often promoted as a conservation strategy for wild birds. However, these agro-ecosystems are actively managed for food production, which may alter bird behaviors or interactions that could change bird health, compared to natural forest. To examine whether there is a difference between the health parameters of wild birds inhabiting shade-grown coffee plantations and natural forest, we evaluated birds in Costa Rica for (1) their general body condition, (2) antibodies to pathogens, (paramyxovirus and Mycoplasma spp.), and (3) the prevalence and diversity of endo-, ecto-, and hemoparasites. We measured exposure to Mycoplasma spp. and paramyxovirus because these are pathogens that could have been introduced with domestic poultry, one mechanism by which these landscapes could be detrimental to wild birds. We captured 1,561 birds representing 75 species. Although seasonal factors influenced body condition, we did not find bird general body condition to be different. A total of 556 birds of 31 species were tested for antibodies against paramyxovirus-1. Of these, five birds tested positive, four of which were from shade coffee. Out of 461 other tests for pathogens (for antibodies and nucleotide detection), none were positive. Pterolichus obtusus, the feather mite of chickens, was found on 15 birds representing two species and all were from shade-coffee plantations. Larvated eggs of Syngamus trachea, a nematode typically associated with chickens, were found in four birds captured in shade coffee and one captured in forest. For hemoparasites, a total of 1,121 blood smears from 68 bird species were examined, and only one species showed a higher prevalence of infection in shade coffee. Our results indicate that shade-coffee plantations do not pose a significant health risk to forest birds, but at least two groups of pathogens may deserve further attention: Haemoproteus spp. and the diversity and identity of endoparasites.

Haemogregarine infections of three species of aquatic freshwater turtles from two sites in Costa Rica.

Twenty-five black river turtles (Rhinoclemmys funerea) and eight white-lipped mud turtles (Kinosternon leucostomum) from Selva Verde, Costa Rica were examined for haemoparasites. Leeches identified as Placobdella multilineata were detected on individuals from both species. All turtles sampled were positive for intraerythrocytic haemogregarines (Apicomplexa:Adeleorina) and the average parasitemia of black river turtles (0.34% ± 0.07) was significantly higher compared to white-lipped mud turtles (0.05% ± 0.006). No correlation was found between parasitemia and relative body mass of either species or between black river turtles from the two habitats. In addition, one scorpion mud turtle (Kinosternon scorpioides) examined from La Pacifica, Costa Rica, was positive for haemogregarines (0.01% parasitemia). Interestingly, parasites of the scorpion mud turtle were significantly smaller than those from the other two species and did not displace the erythrocyte nucleus, whereas parasites from the other two species consistently displaced host cell nuclei and often distorted size and shape of erythrocytes. This is the first report of haemogregarines in turtles from Central America and of haemogregarines in K. leucostomum, K. scorpioides, and any Rhinoclemmys species. Additional studies are needed to better characterise and understand the ecology of these parasites.

A new Isospora species of passerines in the family Turdidae from Costa Rica.

Seven thrush species (Turdidae) from Costa Rica were examined for intestinal parasites; 21 of the 84 (25%) birds sampled were positive for a new species of Isospora. Oocysts of Isospora zorzali n. sp. have thin, smooth, double, and colorless walls; they measure 19.7 ± 1.5 µm × 18.6 ± 1.4 µm (16-24 µm × 15-21 µm), with an average length-width ratio of 1.1 µm. Sporocysts are ovoid, measure 8.5 ± 1.1 µm × 14.5 ± 1.7 µm (7-11 µm × 11-18 µm) with an average length-width ratio of 1.7 µm. A nipple-like stieda body continuous with the sporocyst wall is present, but no substieda body was observed. A sporocyst residuum consisting of large equal sized granules was observed either clumped together or diffusely. The sporocysts fill the entire oocysts with little to no open space observed. This is the first report of Isospora species from any of the sampled host species and also the first report from any species of thrush in Costa Rica.

Isospora troglodytes n. sp. (Apicomplexa: Eimeriidae), a new coccidian species from wrens of Costa Rica.

Nineteen (91%) of 21 rufous-and-white wrens (Thryothorus rufalbus) and five (71%) of seven plain wrens (Cantorchilus modestus) sampled from Costa Rica were positive for a new species of Isospora. Oocysts have a thin, smooth, double, colorless wall and measure 20.1 ± 1.4 × 23.4 ± 1.5 µm (18-24 × 20-26 µm) with an average length-width ratio of 1.2 µm. Sporocysts are ovoid, measure 9.5 ± 0.9 × 15.5 ± 1.1 µm (7-12 × 12-18 µm) with an average length-width ratio of 1.6 µm. A nipple-like steida body continuous with the sporocyst wall and a prominent oval-shaped substeida body are present. In addition to the four sporozoites, a single compact sporocyst residuum was present in each sporocyst. This is the first description of an Isospora species from the family Troglodytidae and the first report of Isospora from the rufous-and-white wren and plain wren.

Selected cardiopulmonary values and baroreceptor reflex in conscious green iguanas (Iguana iguana).

OBJECTIVE: To determine selected cardiopulmonary values and baroreceptor response in conscious green iguanas (Iguana iguana) and to evaluate the use of blood gas analysis and pulse oximetry in this species. ANIMALS: 15 healthy juvenile green iguanas. PROCEDURES: Baseline cardiopulmonary values were determined in 15 conscious iguanas breathing room air. Effects of 100% O(2) inspiration were also measured (n = 6), and the baroreceptor reflex was characterized by exponential sigmoidal curve fitting analysis. RESULTS: Conscious iguanas had a mean ± SD resting heart rate of 52 ± 8 beats/min, respiratory rate of 28 ± 6 breaths/min, and systolic, mean, and diastolic arterial blood pressures of 69 ± 10 mm Hg, 62 ± 12 mm Hg, and 56 ± 13 mm Hg, respectively. Mean arterial pH at 37°C was 7.29 ± 0.11, PaO(2) was 81 ± 10 mm Hg, and PaCO(2) was 42 ± 9 mm Hg; corrected for a body temperature of 30°C, mean arterial pH at 37°C was 7.382 ±0.12, PaO(2) was 54 ± 15 mm Hg, and PaCO(2) was 32 ± 7 mm Hg. Inspiration of 100% O(2) did not change heart and respiratory rates but increased PaO(2) to 486 ± 105 mm Hg (corrected value, 437 ± 96 mm Hg). A baroreceptor reflex was evident, with mean heart rates ranging from 30 ± 3 beats/min to 63 ± 5 beats/min and mean arterial blood pressures ranging from 42 ± 3 mm Hg to 58 ± 3 mm Hg. CONCLUSIONS AND CLINICAL RELEVANCE: This study provided needed information on cardiopulmonary values in healthy green iguanas, the application and limitation of arterial and venous blood gas analysis, and the accuracy of pulse oximetry.

New species of Isospora from the blue-crowned motmot (Momotus momota) from Costa Rica.

Two (33.3%) of 6 blue-crowned motmots (Momotus momota) sampled from Costa Rica were positive for a new species of Isospora. Oocysts of Isospora momotana n. sp. have a double, thick, yellow to orange, 2.3 microm +/- 0.5 microm (2-3 microm) wall, contain 1 to 3 globular polar granules (1-4 microm), are ovoid with heavy pitting on the outer surface, and measure 29.4 +/- 2.3 x 27.5 +/- 2.3 (25-33 x 23-31) with an average length:width ratio of 1.1 (1.0-1.35). Sporocysts are ovoid, contain a residuum composed of large, equal-sized granules, and measure 19.4 +/- 1.3 x 12.2 +/- 1.1 (16-22 x 10-14) with an average length:width ratio of 1.6 (1.2-1.91). A small rounded stieda body, continuous with the sporocyst wall, and a prominent triangular substieda body are present. A second Isospora species was observed in 1 bird, but because only a few oocysts were present, a full description is not provided. This is the first report of coccidia from a motmot (Momotidae) and only the third Ispospora species described from the Coraciiformes.