Using morphometrics to identify sex in the eastern blue-tongued skink (Tiliqua scincoides).

INTRODUCTION: Tiliqua scincoides coexists with human activity and is frequently presented for rehabilitation due to injury. The correct identification of sex is important as animals identified as female should be subject to a different decision-making matrix for rehabilitation. However, identification of sex is notoriously difficult in Tiliqua scincoides. We describe a reliable, safe and cost-effective morphometry-based method. MATERIALS AND METHODS: Adult and sub-adult, wild Tiliqua scincoides dead on presentation or euthanased due to their presenting injuries were collected in South-East Queensland (SE Qld). Head-width to snout-vent length ratio (H:SV) and head-width to trunk length ratio (H:T) were measured and sex was defined at necropsy. Similar data were obtained from a previous study in Sydney, New South Wales (NSW). H:SV and H:T were assessed for accuracy of sex prediction by the area under the receiver operating characteristic curve (AUC-ROC). Optimal cut-points were identified. RESULTS: The AUC-ROC for the H:T test was for NSW adults, 0.99 (n = 29), NSW sub-adults, 0.95 (n = 10), Qld adults, 0.90 (n = 35) and Qld sub-adults, 0.79 (n = 25). In all cases, H:T was as good or superior to H:SV. H:T cut-points optimized for female sexing or both sexes ranged from 0.20 to 0.23 depending on State and adult status. Sensitivities and specificities of the test at suggested optimal cut-points ranged from 0.54 to 1.0. CONCLUSION: We describe how H:T can be used as an accurate method to determine sex in Tiliqua scincoides. However, it is more accurate in adults than sub-adults and more accurate in NSW skinks than in SE Qld skinks.

Parental pre-pregnancy BMI is a dominant early-life risk factor influencing BMI of offspring in adulthood.

OBJECTIVE: We examined parental and early-life variables in order to identify risk factors for adulthood overweight and obesity in offspring. We report here on the longitudinal prevalence of overweight and obesity in Australian children born between 1989 and 1991 and followed from birth to age 22. METHODS: Data were analysed on 1355 participants from the Western Australian Pregnancy Cohort (Raine) Study, with anthropometry collected during pregnancy, at birth, one year and at three yearly intervals thereafter. Multivariate analyses and cross-sectional logistic regression quantified the timing and contribution of early-life risk factors for overweight and obesity in young-adulthood. RESULTS: At five years of age 12.6% of children were overweight and 5.2% were obese. By early adulthood, the prevalence of obesity had increased to 12.8%, whilst overweight remained relatively stable at 14.2% (range from early childhood to adulthood 11-16%). Parental pre-pregnancy body mass index (BMI) was the strongest determinant of adult offspring BMI. Although rapid first year weight gain was associated with increased offspring BMI, the impact of first year weight-gain diminished over childhood, whilst the impact of parental BMI increased over time. CONCLUSIONS: Parental pre-pregnancy BMI and rapid early-life weight gain predispose offspring to obesity in adulthood.

HapMap tag-SNP analysis confirms a role for COMT in schizophrenia risk and reveals a novel association.

Catechol-O-methyl transferase (COMT) encodes an enzyme involved in the metabolism of dopamine and maps to a commonly deleted region that increases schizophrenia risk. A non-synonymous polymorphism (rs4680) in COMT has been previously found to be associated with schizophrenia and results in altered activity levels of COMT. Using a haplotype block-based gene-tagging approach we conducted an association study of seven COMT single nucleotide polymorphisms (SNPs) in 160 patients with a DSM-IV diagnosis of schizophrenia and 250 controls in an Australian population. Two polymorphisms including rs4680 and rs165774 were found to be significantly associated with schizophrenia. The rs4680 results in a Val/Met substitution but the strongest association was shown by the novel SNP, rs165774, which may still be functional even though it is located in intron five. Individuals with schizophrenia were more than twice as likely to carry the GG genotype compared to the AA genotype for both the rs165774 and rs4680 SNPs. This association was slightly improved when males were analysed separately possibly indicating a degree of sexual dimorphism. Our results confirm that COMT is a good candidate for schizophrenia risk, by replicating the association with rs4680 and identifying a novel SNP association.

Analysis of HapMap tag-SNPs in dysbindin (DTNBP1) reveals evidence of consistent association with schizophrenia.

Dystrobrevin binding protein 1 (DTNBP1), or dysbindin, is thought to be critical in regulating the glutamatergic system. While the dopamine pathway is known to be important in the aetiology of schizophrenia, it seems likely that glutamatergic dysfunction can lead to the development of schizophrenia. DTNBP1 is widely expressed in brain, levels are reduced in brains of schizophrenia patients and a DTNBP1 polymorphism has been associated with reduced brain expression. Despite numerous genetic studies no DTNBP1 polymorphism has been strongly implicated in schizophrenia aetiology. Using a haplotype block-based gene-tagging approach we genotyped 13 SNPs in DTNBP1 to investigate possible associations with DTNBP1 and schizophrenia. Four polymorphisms were found to be significantly associated with schizophrenia. The strongest association was found with an A/C SNP in intron 7 (rs9370822). Homozygotes for the C allele of rs9370822 were more than two and a half times as likely to have schizophrenia compared to controls. The other polymorphisms showed much weaker association and are less likely to be biologically significant. These results suggest that DTNBP1 is a good candidate for schizophrenia risk and rs9370822 is either functionally important or in disequilibrium with a functional SNP, although our observations should be viewed with caution until they are independently replicated.

Frequency of feline diabetes mellitus and breed predisposition in domestic cats in Australia.

The frequency of diabetes mellitus is described for cats that received veterinary care from two large feline-only clinics in Brisbane, Australia. Frequency was estimated using period prevalences (the proportion of the population at risk that was affected by diabetes at any point during a specified time period). Of the 12,576 study cats, 93 were affected with diabetes during the 5-year study period, resulting in a 5-year period prevalence of 7.4 per 1000 cats. Period prevalence was significantly higher in Burmese cats (22.4 cats per 1000) than domestic short and longhaired cats (7.6 cats per 1000) and the mean age at first diagnosis during the study period was significantly higher amongst Burmese cats (13.6 years) compared to domestic short and longhaired cats (10.9 years). Further investigations into the apparent predisposition of Burmese cats to diabetes mellitus are indicated.

Genetic heterogeneity of day blindness in Alaskan Malamutes.

Day blindness is a progressive and specific degeneration of cone photoreceptors in the retina of young dogs. This disorder has been associated with a breed-specific non-synonymous substitution in exon 6 of the cyclic nucleotide gated channel beta3 (CNGB3) gene in German Shorthaired Pointer dogs and a genomic deletion removing the entire gene in Alaskan Malamute dogs from the USA. To further investigate this disorder, we characterized CNGB3 in a three-generation pedigree of Alaskan Malamute dogs from Australia segregating for day blindness. Fifteen of the dogs showed clinical signs of day blindness. Four of these were definitively diagnosed by standardized electroretinography. Polymerase chain reaction amplification of exon 6 of CNGB3 was attempted, and as expected, amplification was successful in the 18 unaffected or carrier dogs. However, a non-mutated exon 6 was also amplified and sequenced in six of the 15 affected dogs. On sequencing each exon and exon/intron boundary in two such affected individuals and two unaffected individuals, three exonic substitutions and 12 intronic changes were noted. These sequence variations in affected individuals were also present in one or both unaffected dogs and so appear to have no obvious effect on the protein's function. Hence, day blindness shows genetic heterogeneity within the Alaskan Malamute population of Australia, a result that is somewhat unexpected given the relatively small effective population size of this breed.