Genetic diversity of attached bacteria in the hindgut of the deposit-feeding shrimp Neotrypaea (formerly Callianassa) californiensis (decapoda: thalassinidae).

Microbial colonization of marine invertebrate guts is widespread, but in general the roles that these bacteria play in the nutrition of their hosts are unknown. To examine the diversity and potential nutritional roles of hindgut microbiota in a deposit feeder, PCR-amplified 16S rRNA genes were cloned from the bacterial community attached to the hindguts of the thalassinid shrimp Neotrypaea californiensis exposed to different feeding treatments. Partial 16S rDNA sequences were analyzed for 30 clones for three shrimp per treatment for a total of 270 clones. No effects of host starvation or high-protein diets were apparent on hindgut bacterial community composition. Diversity analyses indicated high variability between bacterial communities in individual shrimp hindguts, but partial 16S rDNA sequences revealed remarkable species-level similarity (>98%) within clusters of sequences from the different shrimp hindguts, and many sequences from different shrimp hindguts were identical. Sequences belonged to three main groups of bacteria: Cytophaga-Flavobacteria-Bacteroides (CFB), proteobacteria, and gram-positives. Of the 270 sequences, 40% belonged to the alpha-proteobacteria, > or = 5% each to the gamma- and epsilon -proteobacteria, and > or =20% each to the gram-positive and CFB groups. All except one sequence are novel with < or = 95% sequence similarity to known genes. Despite weak similarity to known taxa,about 75% of the sequences were most closely related to known symbiotic and sedimentary bacteria. The bacteria in shrimp hindguts represent new species that have not yet been en-countered in other environments, and gut environments may be a rich source of the difficult-to-culture and novel components of marine bacterial diversity.

The tau of continuous feeding on simple foods.

Chemical reactor theory under the premise of maximization of net rate of nutrient absorption has been used to predict throughput time, tau, of digesta in animals. Animals that feed on hexoses, such as many vertebrate fruit and nectar eaters, are of central interest in testing reactor theory because they use no hydrolysis before absorption and, hence, should provide valuable, simplified test cases. Graphical methods based on batch reactors and used to make such predictions in the past can give optimal gut throughput times (tauopt) identical with predictions from continuous plug-flow reactor models derived here: in animals with passive, linear uptake alone, tauopt should decline as hexose concentration of food increases. If saturating active uptake is involved, however, a minimum in tauopt (maximum in ingestion rate) is predicted at intermediate hexose concentration, the exact location of this minimum depending on costs of ingestion as well as on uptake kinetics. That is, tauopt first falls to a minimum with increasing hexose concentration and then increases. Optimal throughput time rises as uptake sites become saturated because there is little gross gain and no net gain from increased ingestion rate when uptake already is nearly saturated. It also rises with increasing costs of ingestion. The continuous-time analytic solutions provided here further make the novel and very general prediction of high sensitivity to decreasing tau below tauopt.

Rapid bacterial growth in the hindgut of a marine deposit feeder.

Antibiotic-insensitive mutants of natural sedimentary bacteria from an intertidal site were selected on gradient plates. Two of these strains, anAeromonas sp. andVibrio alginolyticus, were mixed with natural sediments from the field and fed toAbarenicola vagabunda, an intertidal lugworm characteristic of sandy beaches in the Pacific Northwest. Digestive removal was apparent in the midgut, 97% efficiency being seen forAeromonas sp. Both strains showed rapid growth in the hindgut, increasing between 2 and 3 orders of magnitude in abundance between the midgut and rectum of the polychaete, corresponding with a doubling time of about 50 min for each strain. Direct epifluorescence counts of natural bacteria in guts of animals freshly collected from the field suggest a mean doubling time that is only slightly greater (66 min) for all ingested bacteria that survive midgut digestion. These bacterial growth rates exceed by orders of magnitude the greatest rates reported for ambient marine sediments and suggest that hindgut bacterial growth, though of little immediate importance in the energetics of the animals, may strongly influence both population dynamics of marine bacteria and diagenesis of sedimentary organic matter.

Induction of suspension feeding in spionid polychaetes by high particulate fluxes.

The feeding behavior of three species of spionid polychaetes varied with water velocity. At moderate flows the worms ceased deposit feeding, formed their feeding tentacles into helices, and lifted them into the water column to capture material in suspension. This behavior was apparently a response to increased flux of suspended matter at high flows rather than to flow velocity alone. Organisms capable of switching their feeding behavior may be common in dynamically variable benthic environments.

Detecting two-dimensional spatial structure in biological data.

Cliff and Ord (1973) made versatile methods available for the direct utilization of location data in the analysis of dispersion patterns, but their monograph has as yet seen little use in the ecological literature. Application of their weighted forms of Geary's c and Moran's I indices of spatial autocorrelation to some marine benthos data demonstrates a diversity of population structure not anticipated on the basis of more common measures of pattern. These indices provide objective means to evaluate numerous recent spatial models and hypotheses in geographical ecology and genetics. The procedures are particularly attractive because (1) they efficiently utilize data which are often wasted (i.e., sample coordinates), (2) their application puts few constraints on sampling designs which would otherwise be employed, and (3) they reveal and quantify pattern differences which are not obvious to the untrained eye.

In situ morphologies of deep-sea and sediment bacteria.

Deep-sea and sediment bacteria at the bottom of an approximately 1200-m water column were sampled by means of pressure vessels attached to a remote underwater manipulator. Cells were immediately fixed in situ with glutaraldehyde, and after processing in the laboratory their morphologies were observed with the scanning electron microscope. Most bacteria were coccoid or rod-lide and less than 0.4 mum in diameter or width. Few filamentous bacteria were observed. Bacteria were in aggregates or free-living. It is concluded that morphologies of deep-sea bacteria collected and fixed at the hydrostatic pressure of their environment are, in general, similar to the observed morphologies of deep-sea bacteria determined at 1 atm pressure after collection and decompression during ascent through the water column.