Missing data techniques in classification for cardiovascular dysautonomias diagnosis.

Missing data (MD) is a common and inevitable problem facing data mining (DM)-based decision systems in e-health since many medical historical datasets contain a huge number of missing values. Therefore, a pre-processing stage is usually required to deal with missing values before building any DM-based decision system. The purpose of this paper is to evaluate the impact of MD techniques on classification systems in cardiovascular dysautonomias diagnosis. We analyzed and compared the accuracy rates of four classification techniques: random forest (RF), support vector machines (SVM), C4.5 decision tree, and Naive Bayes (NB), using two MD techniques: deletion or imputation with k-nearest neighbors (KNN). A total of 216 experiments were therefore carried out using three missingness mechanisms (MCAR: missing completely at random, MAR: missing at random and NMAR: not missing at random), two MD techniques (deletion and KNN imputation), nine MD percentages from 10 to 90% over a dataset collected from the autonomic nervous system (ANS) unit of the University Hospital Avicenne in Morocco. The results obtained suggest that using KNN imputation rather than deletion enhances the accuracy rates of the four classifiers. Moreover, the MD percentages have a negative impact on the performance of classification techniques regardless of the MD mechanisms and MD techniques used. In fact, the accuracy rates of the four classifiers decrease as the MD percentage increases. Graphical abstract.

Systematic mapping study of data mining-based empirical studies in cardiology.

Data mining provides the methodology and technology to transform huge amount of data into useful information for decision making. It is a powerful process to extract knowledge and discover new patterns embedded in large data sets. Data mining has been increasingly used in medicine, particularly in cardiology. In fact, data mining applications can greatly benefits all parts involved in cardiology such as patients, cardiologists and nurses. This article aims to perform a systematic mapping study so as to analyze and synthesize empirical studies on the application of data mining techniques in cardiology. A total of 142 articles published between 2000 and 2015 were therefore selected, studied and analyzed according to the four following criteria: year and channel of publication, research type, medical task and empirical type. The results of this mapping study are discussed and a list of recommendations for researchers and cardiologists is provided.

Cardiovascular Dysautonomias Diagnosis Using Crisp and Fuzzy Decision Tree: A Comparative Study.

Decision trees (DTs) are one of the most popular techniques for learning classification systems, especially when it comes to learning from discrete examples. In real world, many data occurred in a fuzzy form. Hence a DT must be able to deal with such fuzzy data. In fact, integrating fuzzy logic when dealing with imprecise and uncertain data allows reducing uncertainty and providing the ability to model fine knowledge details. In this paper, a fuzzy decision tree (FDT) algorithm was applied on a dataset extracted from the ANS (Autonomic Nervous System) unit of the Moroccan university hospital Avicenne. This unit is specialized on performing several dynamic tests to diagnose patients with autonomic disorder and suggest them the appropriate treatment. A set of fuzzy classifiers were generated using FID 3.4. The error rates of the generated FDTs were calculated to measure their performances. Moreover, a comparison between the error rates obtained using crisp and FDTs was carried out and has proved that the results of FDTs were better than those obtained using crisp DTs.

Evaluating a decision making system for cardiovascular dysautonomias diagnosis.

Autonomic nervous system (ANS) is the part of the nervous system that is involved in homeostasis of the whole body functions. A malfunction in this system can lead to a cardiovascular dysautonomias. Hence, a set of dynamic tests are adopted in ANS units to diagnose and treat patients with cardiovascular dysautonomias. The purpose of this study is to develop and evaluate a decision tree based cardiovascular dysautonomias prediction system on a dataset collected from the ANS unit of the Moroccan university hospital Avicenne. We collected a dataset of 263 records from the ANS unit of the Avicenne hospital. This dataset was split into three subsets: training set (123 records), test set (55 records) and validation set (85 records). C4.5 decision tree algorithm was used in this study to develop the prediction system. Moreover, Java Enterprise Edition platform was used to implement a prototype of the developed system which was deployed in the Avicenne ANS unit so as to be clinically validated. The performance of the decision tree-based prediction system was evaluated by means of the error rate criterion. The error rates were measured for each classifier and have achieved an average value of 1.46, 2.24 and 0.89 % in training, test, and validation sets respectively. The results obtained were encouraging but further replicated studies are still needed to be performed in order to confirm the findings of this study.