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1.
Acta Biochim Pol ; 59(1): 5-9, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22428141

RESUMO

Pump-probe spectroscopy after selective excitation of all-trans Cars (n = 9-13) in nonpolar solvent identified a symmetry selection rule of diabatic electronic mixing and diabatic internal conversion, i.e., '1B(u)(+)-to-1B(u)(-) is allowed but 1B(u)(+)-to-3A(g)(-) is forbidden'. Kerr-gate fluorescence spectroscopy showed that this selection rule breaks down, due to the symmetry degradation when the Car molecules are being excited, and, as a result, the 1B(u)(+)-to-3A(g)(-) diabatic electronic mixing and internal conversion become allowed. On the other hand, pump-probe spectroscopy after coherent excitation of the same set of Cars in polar solvent identified three stimulated-emission components (generated by the quantum-beat mechanism), consisting of the long-lived coherent cross term from the 1B(u)(+) + 1B(u)(-) or 1B(u)(+) + 3A(g)(-) diabatic pair and incoherent short-lived 1B(u)(+) and 1B(u)(-) or 3A(g)(-) split incoherent terms. The same type of stimulated-emission components were identified in Cars bound to LH2 complexes, their lifetimes being substantially shortened by the Car-to-BChl singlet-energy transfer. Each diabatic pair and its split components appeared with high intensities in the first component. The low-energy shifts of the 1B(u)(+)(0), 1B(u)(-)(0) and 3A(g)(-)(0) levels and efficient triplet generation were also found.


Assuntos
Carotenoides/química , Luz , Modelos Químicos
2.
Molecules ; 17(2): 2188-218, 2012 Feb 22.
Artigo em Inglês | MEDLINE | ID: mdl-22357317

RESUMO

The mechanisms of suppression and enhancement of photocurrent/conversion efficiency (performance) in dye-sensitized solar cells, using carotenoid and chlorophyll derivatives as sensitizers, were compared systematically. The key factor to enhance the performance was found to be how to minimize interaction among the excited-state dye-sensitizer(s). In a set of retinoic-acid (RA) and carotenoic-acid (CA) sensitizers, having n conjugated double bonds, CA7 gave rise to the highest performance, which was reduced toward RA5 and CA13. The former was ascribed to the generation of triplet and the resultant singlet-triplet annihilation reaction, while the latter, to the intrinsic electron injection efficiency. In a set of shorter polyene sensitizers having different polarizabilities, the one with the highest polarizability (the highest trend of aggregate formation) exhibited the higher performance toward the lower dye concentration and the lower light intensity, contrary to our expectation. This is ascribed to a decrease in the singlet-triplet annihilation reaction. The performance of cosensitization, by a pair of pheophorbide sensitizers without and with the central metal, Mg or Zn, was enhanced by the light absorption (complementary rather than competitive), the transition-dipole moments (orthogonal rather than parallel) and by the pathways of electron injection (energetically independent rather than interactive).


Assuntos
Carotenoides/química , Clorofila/química , Corantes/química , Energia Solar , Tretinoína/química
3.
Int J Mol Sci ; 11(4): 1888-929, 2010 Apr 26.
Artigo em Inglês | MEDLINE | ID: mdl-20480049

RESUMO

The unique excited-state properties of the overlapped (diabatic) optically-allowed 1B(u) (+) and the optically-forbidden 1B(u) (-) or 3A(g) (-) vibronic levels close to conical intersection ('the diabatic pair') are summarized: Pump-probe spectroscopy after selective excitation with approximately 100 fs pulses of all-trans carotenoids (Cars) in nonpolar solvent identified a symmetry selection rule in the diabatic electronic mixing and diabatic internal conversion, i.e., '1B(u) (+)-to-1B(u) (-) is allowed but 1B(u) (+)-to-3A(g) (-) is forbidden'. On the other hand, pump-probe spectroscopy after coherent excitation with approximately 30 fs of all-trans Cars in THF generated stimulated emission with quantum beat, consisting of the long-lived coherent diabatic cross term and a pair of short-lived incoherent terms.


Assuntos
Carotenoides/química , Complexos de Proteínas Captadores de Luz/química , Carotenoides/metabolismo , Complexos de Proteínas Captadores de Luz/metabolismo , Simulação de Dinâmica Molecular , Teoria Quântica , Espectrofotometria , Termodinâmica
4.
Biochemistry ; 48(1): 74-86, 2009 Jan 13.
Artigo em Inglês | MEDLINE | ID: mdl-19123920

RESUMO

The stacking of the bacteriochlorophyll (BChl) c macrocycles and the role of water in forming an aggregate sheet, in chlorosome, were examined by means of (13)C NMR spectroscopy, the measurement of the X-ray diffraction pattern, and (25)Mg NMR spectroscopy. (1) The stacking of the macrocycles, i.e., weakly overlapped dimers forming displaced layers, was selected out of six different kinds of stacking so far identified in the aggregates of isomeric BChl c in solution and in the solid aggregate of an isomeric mixture of BChl c extracted from Chlorobium limicola. The selection was based on the comparison of the intermolecular (13)C...(13)C magnetic-dipole correlations with the nearest-neighbor carbon-to-carbon close contacts simulated for the above six different stackings. It has turned out that the stacking of the macrocycles in chlorosome is basically the same as that in the in vitro solid aggregate. (2) The crucial role of water in stabilizing the aggregate structure in chlorosome was shown by tracing the dehydration processes and by comparison with the solid aggregate using the X-ray diffraction pattern. Possible binding sites of water molecules were located, by structural simulation, based on the particular stacking structure. (3) The dimer-based stacking of the macrocycles was evidenced by (25)Mg NMR spectroscopy, which exhibited a pair of signals showing different quadrupole coupling, due to the presence or absence of a water molecule in the axial position.


Assuntos
Proteínas de Bactérias/química , Bacterioclorofilas/química , Chlorobium/metabolismo , Proteínas de Bactérias/metabolismo , Bacterioclorofilas/metabolismo , Chlorobium/ultraestrutura , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Conformação Proteica , Água/química , Difração de Raios X
5.
Biochemistry ; 46(24): 7302-13, 2007 Jun 19.
Artigo em Inglês | MEDLINE | ID: mdl-17530778

RESUMO

Rubrivivax gelatinosus having both the spheroidene and spirilloxanthin biosynthetic pathways produces carotenoids (Cars) with a variety of conjugated chains, which consist of different numbers of conjugated double bonds (n), including the C=C (m) and C=O (o) bonds. When grown under anaerobic conditions, the wild type produces Cars for which n = m = 9-13, whereas under semiaerobic conditions, it additionally produces Cars for which n = m + o = 10 + 1, 13 + 1, and 13 + 2. On the other hand, a mutant, in which the latter pathway is genetically blocked, produces only Cars for which n = 9 and 10 under anaerobic conditions and n = 9, 10, and 10 + 1 under semianaerobic conditions. Those Cars that were extracted from the LH2 complex (LH2) and the reaction center (RC), isolated from the wild-type and the mutant Rvi. gelatinosus, were analyzed by HPLC, and their structures were determined by mass spectrometry and 1H NMR spectroscopy. The selective binding of Cars to those pigment-protein complexes has been characterized as follows. (1) Cars with a shorter conjugated chain are selectively bound to LH2 whereas Cars with a longer conjugated chain to the RC. (2) Shorter chain Cars with a hydroxyl group are bound to LH2 almost exclusively. This rule holds either in the absence or in the presence of the keto group. The natural selection of shorter chain Cars by LH2 and longer chain Cars by the RC is discussed, on the basis of the results now available, in relation to the light-harvesting and photoprotective functions of Cars.


Assuntos
Betaproteobacteria/metabolismo , Carotenoides/química , Carotenoides/metabolismo , Complexos de Proteínas Captadores de Luz/metabolismo , Aerobiose , Anaerobiose , Sítios de Ligação , Transferência de Energia , Complexos de Proteínas Captadores de Luz/química , Espectroscopia de Ressonância Magnética , Estrutura Molecular , Ligação Proteica , Espectrometria de Massas por Ionização por Electrospray , Termodinâmica
6.
Biochemistry ; 46(22): 6513-24, 2007 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-17497832

RESUMO

Pigments including bacteriochlorophyll (BChl) c, carotenoids, and a trace of BChl a together with a lipid, monogalactosyl diglyceride (MGDG), were extracted with chloroform/methanol (1:1 v/v) from an aqueous suspension (50 mM Tris-HCl, pH 8.0) of chlorosomes from Chlorobium limicola; other lipids and proteins were left behind in the aqueous layer by funnel separation. The chloroform layer was dried by purging N2 gas, dissolved in methanol, and rapidly injected into the aqueous layer to reassemble chlorosomes. This technique has been developed to replace one-half of the inherent 12C-BChl c by 13C-BChl c to identify the intermolecular 13C...13C magnetic dipole correlation peaks (that are supposed to reduce their intensities to one-fourth by reducing the 13C-BChl c concentration into one-half) and to determine the structure of BChl c aggregates in the rod elements by means of solid-state NMR spectroscopy. The isotopically replaced chlorosomes were characterized (1) by sucrose density gradient centrifugation, zeta potential measurement, electron microscopy, and dynamic light scattering measurement to determine the morphology of chlorosomes, (2) by 13C NMR spectroscopy, electronic absorption and circular dichroism spectroscopies, and low-angle X-ray diffraction to determine the pigment assembly in the rod elements, and (3) by subpicosecond time-resolved absorption spectroscopy to determine the excited-state dynamics in the pigment assembly. The results characterized the reassembled chlorosomes to have (1) similar but longer morphological structures, (2) almost the same pigment assembly in the rod elements, and (3) basically the same excited-state dynamics in the pigment assembly.


Assuntos
Cromatóforos Bacterianos/química , Cromatóforos Bacterianos/metabolismo , Bacterioclorofilas/química , Bacterioclorofilas/metabolismo , Chlorobium/metabolismo , Complexos de Proteínas Captadores de Luz/metabolismo , Cromatóforos Bacterianos/ultraestrutura , Fatores Biológicos , Isótopos de Carbono/química , Isótopos de Carbono/metabolismo , Carotenoides/química , Carotenoides/metabolismo , Chlorobium/citologia , Clorofila/química , Dimerização , Isomerismo , Complexos de Proteínas Captadores de Luz/química , Espectroscopia de Ressonância Magnética , Microscopia Eletrônica , Modelos Químicos , Modelos Moleculares , Ressonância Magnética Nuclear Biomolecular , Espectrofotometria
7.
Biochemistry ; 46(8): 2181-97, 2007 Feb 27.
Artigo em Inglês | MEDLINE | ID: mdl-17263561

RESUMO

In addition to the roles of antioxidant and spacer, carotenoids (Cars) in purple photosynthetic bacteria pursue two physiological functions, i.e., light harvesting and photoprotection. To reveal the mechanisms of the photoprotective function, i.e., quenching triplet bacteriochlorophyll to prevent the sensitized generation of singlet oxygen, the triplet absorption spectra were recorded for Cars, where the number of conjugated double bonds (n) is in the region of 9-13, to determine the dependence on n of the triplet lifetime. The Cars examined include those in (a) solution; (b) the reconstituted LH1 complexes; (c) the native LH2 complexes from Rba. sphaeroides G1C, Rba. sphaeroides 2.4.1, Rsp. molischianum, and Rps. acidophila 10050; (d) the RCs from Rba. sphaeroides G1C, Rba. sphaeroides 2.4.1, and Rsp. rubrum S1; and (e) the RC-LH1 complexes from Rba. sphaeroides G1C, Rba. sphaeroides 2.4.1, Rsp. molischianum, Rps. acidophila 10050, and Rsp. rubrum S1. The results lead us to propose the following mechanisms: (i) A substantial shift of the linear dependence to shorter lifetimes on going from solution to the LH2 complex was ascribed to the twisting of the Car conjugated chain. (ii) A substantial decrease in the slope of the linear dependence on going from the reconstituted LH1 to the LH1 component of the RC-LH1 complex was ascribed to the minor-component Car forming a leak channel of triplet energy. (iii) The loss of conjugation-length dependence on going from the isolated RC to the RC component of the RC-LH1 complex was ascribed to the presence of a triplet-energy reservoir consisting of bacteriochlorophylls in the RC component.


Assuntos
Carotenoides/química , Carotenoides/metabolismo , Complexos de Proteínas Captadores de Luz/química , Complexos de Proteínas Captadores de Luz/metabolismo , Proteínas de Plantas/química , Proteínas de Bactérias/química , Metabolismo Energético , Solanum lycopersicum/química , Proteínas de Plantas/metabolismo , Proteobactérias/química , Análise Espectral
8.
Proc Natl Acad Sci U S A ; 104(3): 790-5, 2007 Jan 16.
Artigo em Inglês | MEDLINE | ID: mdl-17215361

RESUMO

We have determined the atomic structure of the bacteriochlorophyll c (BChl c) assembly in a huge light-harvesting organelle, the chlorosome of green photosynthetic bacteria, by solid-state NMR. Previous electron microscopic and spectroscopic studies indicated that chlorosomes have a cylindrical architecture with a diameter of approximately 10 nm consisting of layered BChl molecules. Assembly structures in huge noncrystalline chlorosomes have been proposed based mainly on structure-dependent chemical shifts and a few distances acquired by solid-state NMR, but those studies did not provide a definite structure. Our approach is based on (13)C dipolar spin-diffusion solid-state NMR of uniformly (13)C-labeled chlorosomes under magic-angle spinning. Approximately 90 intermolecular C C distances were obtained by simultaneous assignment of distance correlations and structure optimization preceded by polarization-transfer matrix analysis. It was determined from the approximately 90 intermolecular distances that BChl c molecules form piggyback-dimer-based parallel layers. This finding rules out the well known monomer-based structures. A molecular model of the cylinder in the chlorosome was built by using this structure. It provided insights into the mechanisms of efficient light harvesting and excitation transfer to the reaction centers. This work constitutes an important advance in the structure determination of huge intact systems that cannot be crystallized.


Assuntos
Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Bacterioclorofilas/química , Bacterioclorofilas/metabolismo , Chlorobium/química , Chlorobium/metabolismo , Ressonância Magnética Nuclear Biomolecular , Chlorobium/efeitos da radiação , Difusão , Dimerização , Modelos Moleculares , Estrutura Quaternária de Proteína , Estrutura Terciária de Proteína
9.
Biochemistry ; 45(24): 7574-85, 2006 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-16768453

RESUMO

A mixture of bacteriochlorophyll (BChl) c isomers was extracted from the cells of Chlorobium limicola that were grown in the media of 13C-enriched and natural-abundance isotopic compositions. The magic-angle spinning 13C NMR proton-driven spin-diffusion spectra were recorded with mixing times of 50, 100, and 250 ms for two different kinds of in vitro aggregates, one consisting of pure [13C]BChl c and the other consisting of a 1:1 mixture of [13C]BChl c and [12C]BChl c; those peaks whose intensities were reduced to approximately 1/4 by this dilution were assigned to intermolecular 13C-13C dipolar correlation peaks. On the other hand, the nearest-neighbor intermolecular carbon-carbon close contacts with distances of 4-6 A were simulated, to predict observed correlation peaks, for six different models of BChl c assembly. They include weakly overlapped monomers forming structure 1 and structure 2, strongly overlapped dimers forming straight and inclined columns, and weakly overlapped dimers forming aligned and displaced layers. Comparison between the observed correlation peaks and the predicted carbon-carbon close contacts, for both the macrocycles and the side chains, led us to a conclusion that the weakly overlapped dimers forming displaced layers are most likely the assembly of the BChl c molecules in the aggregate.


Assuntos
Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Bacterioclorofilas/química , Bacterioclorofilas/metabolismo , Chlorobium/metabolismo , Proteínas de Bactérias/genética , Bacterioclorofilas/genética , Isótopos de Carbono , Chlorobium/citologia , Chlorobium/genética , Dimerização , Técnicas In Vitro , Isomerismo , Modelos Químicos , Modelos Moleculares , Ressonância Magnética Nuclear Biomolecular
10.
Biochemistry ; 45(7): 2053-62, 2006 Feb 21.
Artigo em Inglês | MEDLINE | ID: mdl-16475794

RESUMO

Time-resolved EPR spectra of 15-cis-spheroidene bound to the reaction center from Rhodobacter sphaeroides 2.4.1 were recorded at low temperatures. (1) A three-component analysis of the spectral-data matrices by singular-value decomposition followed by global fitting identified the transformation of the triplet carotenoid, (3)Car(I) --> (3)Car(II); during this process, the leak of the triplet population was suggested. A four-component analysis suggested the presence of a representative intermediate, (3)Car(R), that forms a leak channel of the triplet population. (2) A theoretical calculation of the zero-field splitting parameters, |D| and |E|, by the use of a polyene model, showed that the transformation, (3)Car(I) --> (3)Car(R) --> (3)Car(II), accompanies the conformational changes of (0 degrees , 0 degrees , 0 degrees ) --> (+20 degrees , -20 degrees , +20 degrees ) --> (+45 degrees , -40 degrees , +40 degrees ) around the central cis C15=C15', trans C13=C14, and trans C11=C12 bonds, respectively. (3) The initial, rapid decrease followed by the inversion of spin polarization along the z axis of (3)Car was observed, which was correlated with a change in the spin angular momentum. (4) In reference to the binding pocket of the Car, determined by X-ray crystallography, the conformational changes were ascribed to the intrinsic isomerization property of 15-cis (3)Car as well as the Car-peptide intermolecular interaction; a detailed picture was proposed. All of the above results support the mechanism of triplet-energy dissipation proposed previously: the rotational motions around the central double bonds cause a change in the orbital angular momentum and, through the spin-orbit coupling, a change in the spin angular momentum, which enhances the T(1) --> S(0) intersystem crossing dissipating the triplet energy.


Assuntos
Carotenoides/química , Complexo de Proteínas do Centro de Reação Fotossintética/metabolismo , Rhodobacter sphaeroides/metabolismo , Espectroscopia de Ressonância de Spin Eletrônica , Isomerismo , Modelos Moleculares , Conformação Molecular
11.
J Phys Chem B ; 109(36): 17066-77, 2005 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-16853176

RESUMO

To examine the mechanisms of electron injection to TiO2 in retinoic acid (RA) and carotenoic acids (CAs), including RA5, CA6, CA7, CA8, CA9, and CA11 having the number of conjugated double bonds n = 5, 6, 7, 8, 9, and 11, respectively, their subpicosecond time-resolved absorption spectra were recorded free in solution and bound to TiO2 nanoparticles in suspension. The time-resolved spectra were analyzed by singular-value decomposition (SVD) followed by global fitting based on an energy diagram consisting of the 3A(g)(-), 1B(u)(-), 1B(u)(+), and 2A(g)(-) singlet excited states, whose energies had been determined as functions of 1/(2n + 1) by the use of carotenoids with n = 9-13. It was found that electron injection took place from both the 1B(u)(+) and 2A(g)(-) states in RA5, CA6, CA7, and CA8, whereas only from the 1B(u)(+) state in CA9 and CA11. The electron-injection efficiencies were determined, by the use of the relevant time constants determined by the SVD and global-fitting analyses, to be in the following order: RA5 approximately CA6 < CA7 > CA8 > CA9 > CA11. To determine the mechanism of charge recombination via the T(1) state, submicrosecond time-resolved absorption spectra of RA5, CA6, CA7, and CA8 bound to TiO2 nanoparticles in suspension were recorded. The SVD and global-fitting analyses lead us to a new scheme, which includes the formation of the D(0)(*+) - T(1) complex followed by transformation to both the D(0)(*+) and T(1) states. On the other hand, their one-electron oxidation potentials were determined, and their singlet and triplet levels were scaled to the conduction band edge (CBE) of TiO2. The T(1) level was lower than, but closest to, the CBE in RA5, and it became lower in the order RA5, CA6, CA7, and CA8. Consistent with the energy gap between the CBE and the T(1) levels, the generation of the T(1) state (or in other words, charge recombination) decreased in the order RA5 > CA6 > CA7 > CA8.


Assuntos
Carotenoides/química , Elétrons , Nanopartículas Metálicas/química , Análise Espectral/métodos , Titânio/química , Tretinoína/química , Estrutura Molecular
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