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1.
Front Public Health ; 10: 907280, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36033781

RESUMO

Due to urbanization, solid waste pollution is an increasing concern for rivers, possibly threatening human health, ecological integrity, and ecosystem services. Riverine management in urban landscapes requires best management practices since the river is a vital component in urban ecological civilization, and it is very imperative to synchronize the connection between urban development and river protection. Thus, the implementation of proper and innovative measures is vital to control garbage pollution in the rivers. A robot that cleans the waste autonomously can be a good solution to manage river pollution efficiently. Identifying and obtaining precise positions of garbage are the most crucial parts of the visual system for a cleaning robot. Computer vision has paved a way for computers to understand and interpret the surrounding objects. The development of an accurate computer vision system is a vital step toward a robotic platform since this is the front-end observation system before consequent manipulation and grasping systems. The scope of this work is to acquire visual information about floating garbage on the river, which is vital in building a robotic platform for river cleaning robots. In this paper, an automated detection system based on the improved You Only Look Once (YOLO) model is developed to detect floating garbage under various conditions, such as fluctuating illumination, complex background, and occlusion. The proposed object detection model has been shown to promote rapid convergence which improves the training time duration. In addition, the proposed object detection model has been shown to improve detection accuracy by strengthening the non-linear feature extraction process. The results showed that the proposed model achieved a mean average precision (mAP) value of 89%. Hence, the proposed model is considered feasible for identifying five classes of garbage, such as plastic bottles, aluminum cans, plastic bags, styrofoam, and plastic containers.


Assuntos
Ecossistema , Resíduos Sólidos , Humanos , Plásticos , Rios
2.
BMC Bioinformatics ; 23(1): 273, 2022 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-35818034

RESUMO

BACKGROUND: DNA Methylation is one of the most important epigenetic processes that are crucial to regulating the functioning of the human genome without altering the DNA sequence. DNA Methylation data for cancer patients are becoming more accessible than ever, which is attributed to newer DNA sequencing technologies, notably, the relatively low-cost DNA microarray technology by Illumina Infinium. This technology makes it possible to study DNA methylation at hundreds of thousands of different loci. Currently, most of the research found in the literature focuses on the discovery of DNA methylation markers for specific cancer types. A relatively small number of studies have attempted to find unified DNA methylation biomarkers that can diagnose different types of cancer (pan-cancer classification). RESULTS: In this study, the aim is to conduct a pan-classification of cancer disease. We retrieved individual data for different types of cancer patients from The Cancer Genome Atlas (TCGA) portal. We selected data for many cancer types: Breast Cancer (BRCA), Ovary Cancer (OV), Stomach Cancer (STOMACH), Colon Cancer (COAD), Kidney Cancer (KIRC), Liver Cancer (LIHC), Lung Cancer (LUSC), Prostate Cancer (PRAD) and Thyroid cancer (THCA). The data was pre-processed and later used to build the required dataset. The system that we developed consists of two main stages. The purpose of the first stage is to perform feature selection and, therefore, decrease the dimensionality of the DNA methylation loci (features). This is accomplished using an unsupervised metaheuristic technique. As for the second stage, we used supervised machine learning and developed deep neural network (DNN) models to help classify the samples' malignancy status and cancer type. Experimental results showed that compared to recently published methods, our proposed system achieved better classification results in terms of recall, and similar and higher results in terms of precision and accuracy. The proposed system also achieved an excellent receiver operating characteristic area under the curve (ROC AUC) values varying from 0.85 to 0.89. CONCLUSIONS: This research presented an effective new approach to classify different cancer types based on DNA methylation data retrieved from TCGA. The performance of the proposed system was compared to recently published works, using different performance metrics. It provided better results, confirming the effectiveness of the proposed method for classifying different cancer types based on DNA methylation data.


Assuntos
Aprendizado Profundo , Neoplasias Pulmonares , Metilação de DNA , Epigênese Genética , Feminino , Genoma Humano , Humanos , Neoplasias Pulmonares/genética , Masculino
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