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1.
Heliyon ; 10(5): e26416, 2024 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-38468957

RESUMO

The emergence of federated learning (FL) technique in fog-enabled healthcare system has leveraged enhanced privacy towards safeguarding sensitive patient information over heterogeneous computing platforms. In this paper, we introduce the FedHealthFog framework, which was meticulously developed to overcome the difficulties of distributed learning in resource-constrained IoT-enabled healthcare systems, particularly those sensitive to delays and energy efficiency. Conventional federated learning approaches face challenges stemming from substantial compute requirements and significant communication costs. This is primarily due to their reliance on a singular server for the aggregation of global data, which results in inefficient training models. We present a transformational approach to address these problems by elevating strategically placed fog nodes to the position of local aggregators within the federated learning architecture. A sophisticated greedy heuristic technique is used to optimize the choice of a fog node as the global aggregator in each communication cycle between edge devices and the cloud. The FedHealthFog system notably accounts for drop in communication latency of 87.01%, 26.90%, and 71.74%, and energy consumption of 57.98%, 34.36%, and 35.37% respectively, for three benchmark algorithms analyzed in this study. The effectiveness of FedHealthFog is strongly supported by outcomes of our experiments compared to cutting-edge alternatives while simultaneously reducing number of global aggregation cycles. These findings highlight FedHealthFog's potential to transform federated learning in resource-constrained IoT environments for delay-sensitive applications.

2.
Animals (Basel) ; 13(13)2023 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-37443968

RESUMO

In this study, we hypothesized that the limited geographical distribution of Pseudopungtungia tenuicorpa in South Korea is closely related to the local abundance of their preferred spawning habitats. Eggs of P. tenuicorpa were most frequently observed in cracks smaller than 5 cm, followed by the nests of other fish, such as Coreoperca herzi. Although eggs of P. tenuicorpa were also found in cracks larger than 6 cm, most of them were consumed or damaged by other fish. However, the number of P. tenuicorpa eggs spawned in cracks smaller than 5 cm remained similar to the number of eggs at the time of initial spawning, even after 9 days. The strong preference of P. tenuicorpa for cracks smaller than 5 cm was found to influence the geographical distribution of P. tenuicorpa in South Korea. In the upper reaches of the Han River, the ratio of cracks smaller than 5 cm is higher than that in the Geum River and in the Nakdong River, which contributes to the stable population growth of P. tenuicorpa there. In the future, management strategies to maintain/restore cracks smaller than 5 cm should be reviewed for the preservation of this endemic fish in South Korea.

3.
Sci Rep ; 13(1): 9937, 2023 06 19.
Artigo em Inglês | MEDLINE | ID: mdl-37336964

RESUMO

Colorectal cancer is the third most common type of cancer diagnosed annually, and the second leading cause of death due to cancer. Early diagnosis of this ailment is vital for preventing the tumours to spread and plan treatment to possibly eradicate the disease. However, population-wide screening is stunted by the requirement of medical professionals to analyse histological slides manually. Thus, an automated computer-aided detection (CAD) framework based on deep learning is proposed in this research that uses histological slide images for predictions. Ensemble learning is a popular strategy for fusing the salient properties of several models to make the final predictions. However, such frameworks are computationally costly since it requires the training of multiple base learners. Instead, in this study, we adopt a snapshot ensemble method, wherein, instead of the traditional method of fusing decision scores from the snapshots of a Convolutional Neural Network (CNN) model, we extract deep features from the penultimate layer of the CNN model. Since the deep features are extracted from the same CNN model but for different learning environments, there may be redundancy in the feature set. To alleviate this, the features are fed into Particle Swarm Optimization, a popular meta-heuristic, for dimensionality reduction of the feature space and better classification. Upon evaluation on a publicly available colorectal cancer histology dataset using a five-fold cross-validation scheme, the proposed method obtains a highest accuracy of 97.60% and F1-Score of 97.61%, outperforming existing state-of-the-art methods on the same dataset. Further, qualitative investigation of class activation maps provide visual explainability to medical practitioners, as well as justifies the use of the CAD framework in screening of colorectal histology. Our source codes are publicly accessible at: https://github.com/soumitri2001/SnapEnsemFS .


Assuntos
Neoplasias Colorretais , Redes Neurais de Computação , Humanos , Computadores , Software , Neoplasias Colorretais/diagnóstico
4.
Biosensors (Basel) ; 12(12)2022 Dec 09.
Artigo em Inglês | MEDLINE | ID: mdl-36551120

RESUMO

The human body is designed to experience stress and react to it, and experiencing challenges causes our body to produce physical and mental responses and also helps our body to adjust to new situations. However, stress becomes a problem when it continues to remain without a period of relaxation or relief. When a person has long-term stress, continued activation of the stress response causes wear and tear on the body. Chronic stress results in cancer, cardiovascular disease, depression, and diabetes, and thus is deeply detrimental to our health. Previous researchers have performed a lot of work regarding mental stress, using mainly machine-learning-based approaches. However, most of the methods have used raw, unprocessed data, which cause more errors and thereby affect the overall model performance. Moreover, corrupt data values are very common, especially for wearable sensor datasets, which may also lead to poor performance in this regard. This paper introduces a deep-learning-based method for mental stress detection by encoding time series raw data into Gramian Angular Field images, which results in promising accuracy while detecting the stress levels of an individual. The experiment has been conducted on two standard benchmark datasets, namely WESAD (wearable stress and affect detection) and SWELL. During the studies, testing accuracies of 94.8% and 99.39% are achieved for the WESAD and SWELL datasets, respectively. For the WESAD dataset, chest data are taken for the experiment, including the data of sensor modalities such as three-axis acceleration (ACC), electrocardiogram (ECG), body temperature (TEMP), respiration (RESP), etc.


Assuntos
Redes Neurais de Computação , Dispositivos Eletrônicos Vestíveis , Humanos , Aprendizado de Máquina , Eletrocardiografia , Estresse Psicológico
5.
Biology (Basel) ; 11(10)2022 Sep 27.
Artigo em Inglês | MEDLINE | ID: mdl-36290312

RESUMO

Morphological or behavioral defense mechanisms are important evolutionary strategies for the survival of prey. Studies have focused on predation and competition, but infection has been overlooked, despite being a determining factor of distribution and species diversity of prey. We hypothesized that the winter migration of Daphnia pulicaria is a community defense strategy to avoid fungal infection. To test this hypothesis, environmental variables and the Cladocera community, including D. pulicaria, were monitored in three study sections of the Anri Reservoir in the Republic of Korea during September 2010-August 2015. During three winter seasons, the density of infected D. pulicaria increased in all study sections, and they migrated from the central to the littoral area. Most of the infected individuals had dormant eggs in sexually reproducing mothers. However, when the proportion of non-infected individuals was higher than that of infected individuals, winter migration was not observed. Additional microcosm experiments showed that dormant eggs of D. pulicaria obtained from ice crystals in the littoral area had lower hatching and infection rates than those obtained from mothers moving from other zones. Therefore, the migration of D. pulicaria during winter is an active response to avoid intergenerational fungal infection.

6.
Sensors (Basel) ; 22(16)2022 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-36015869

RESUMO

Wireless sensor networks (WSNs) have recently been viewed as the basic architecture that prepared the way for the Internet of Things (IoT) to arise. Nevertheless, when WSNs are linked with the IoT, a difficult issue arises due to excessive energy utilization in their nodes and short network longevity. As a result, energy constraints in sensor nodes, sensor data sharing and routing protocols are the fundamental topics in WSN. This research presents an enhanced smart-energy-efficient routing protocol (ESEERP) technique that extends the lifetime of the network and improves its connection to meet the aforementioned deficiencies. It selects the Cluster Head (CH) depending on an efficient optimization method derived from several purposes. It aids in the reduction of sleepy sensor nodes and decreases energy utilization. A Sail Fish Optimizer (SFO) is used to find an appropriate route to the sink node for data transfer following CH selection. Regarding energy utilization, bandwidth, packet delivery ratio and network longevity, the proposed methodology is mathematically studied, and the results have been compared to identical current approaches such as a Genetic algorithm (GA), Ant Lion optimization (ALO) and Particle Swarm Optimization (PSO). The simulation shows that in the proposed approach for the longevity of the network, there are 3500 rounds; energy utilization achieves a maximum of 0.5 Joules; bandwidth transmits the data at the rate of 0.52 MBPS; the packet delivery ratio (PDR) is at the rate of 96% for 500 nodes, respectively.


Assuntos
Redes de Comunicação de Computadores , Internet das Coisas , Algoritmos , Animais , Conservação de Recursos Energéticos , Tecnologia sem Fio
7.
Comput Intell Neurosci ; 2022: 7086632, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35800676

RESUMO

It is vital to develop an appropriate prediction model and link carefully to measurable events such as clinical parameters and patient outcomes to analyze the severity of the disease. Timely identifying retinal diseases is becoming more vital to prevent blindness among young and adults. Investigation of blood vessels delivers preliminary information on the existence and treatment of glaucoma, retinopathy, and so on. During the analysis of diabetic retinopathy, one of the essential steps is to extract the retinal blood vessel accurately. This study presents an improved Gabor filter through various enhancement approaches. The degraded images with the enhancement of certain features can simplify image interpretation both for a human observer and for machine recognition. Thus, in this work, few enhancement approaches such as Gamma corrected adaptively with distributed weight (GCADW), joint equalization of histogram (JEH), homomorphic filter, unsharp masking filter, adaptive unsharp masking filter, and particle swarm optimization (PSO) based unsharp masking filter are taken into consideration. In this paper, an effort has been made to improve the performance of the Gabor filter by combining it with different enhancement methods and to enhance the detection of blood vessels. The performance of all the suggested approaches is assessed on publicly available databases such as DRIVE and CHASE_DB1. The results of all the integrated enhanced techniques are analyzed, discussed, and compared. The best result is delivered by PSO unsharp masking filter combined with the Gabor filter with an accuracy of 0.9593 for the DRIVE database and 0.9685 for the CHASE_DB1 database. The results illustrate the robustness of the recommended model in automatic blood vessel segmentation that makes it possible to be a clinical support decision tool in diabetic retinopathy diagnosis.


Assuntos
Retinopatia Diabética , Algoritmos , Bases de Dados Factuais , Humanos , Aumento da Imagem/métodos , Processamento de Imagem Assistida por Computador/métodos , Vasos Retinianos
8.
Nat Plants ; 8(6): 646-655, 2022 06.
Artigo em Inglês | MEDLINE | ID: mdl-35697730

RESUMO

Hundreds of leucine-rich repeat receptor kinases (LRR-RKs) have evolved to control diverse processes of growth, development and immunity in plants, but the mechanisms that link LRR-RKs to distinct cellular responses are not understood. Here we show that two LRR-RKs, the brassinosteroid hormone receptor BRASSINOSTEROID INSENSITIVE 1 (BRI1) and the flagellin receptor FLAGELLIN SENSING 2 (FLS2), regulate downstream glycogen synthase kinase 3 (GSK3) and mitogen-activated protein (MAP) kinases, respectively, through phosphocoding of the BRI1-SUPPRESSOR1 (BSU1) phosphatase. BSU1 was previously identified as a component that inactivates GSK3s in the BRI1 pathway. We surprisingly found that the loss of the BSU1 family phosphatases activates effector-triggered immunity and impairs flagellin-triggered MAP kinase activation and immunity. The flagellin-activated BOTRYTIS-INDUCED KINASE 1 (BIK1) phosphorylates BSU1 at serine 251. Mutation of serine 251 reduces BSU1's ability to mediate flagellin-induced MAP kinase activation and immunity, but not its abilities to suppress effector-triggered immunity and interact with GSK3, which is enhanced through the phosphorylation of BSU1 at serine 764 upon brassinosteroid signalling. These results demonstrate that BSU1 plays an essential role in immunity and transduces brassinosteroid-BRI1 and flagellin-FLS2 signals using different phosphorylation sites. Our study illustrates that phosphocoding in shared downstream components provides signalling specificities for diverse plant receptor kinases.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , Brassinosteroides/metabolismo , Flagelina/metabolismo , Quinase 3 da Glicogênio Sintase/metabolismo , Monoéster Fosfórico Hidrolases/metabolismo , Plantas/metabolismo , Proteínas Serina-Treonina Quinases , Serina/metabolismo
9.
Mol Plant ; 15(6): 991-1007, 2022 06 06.
Artigo em Inglês | MEDLINE | ID: mdl-35524409

RESUMO

Salicylic acid (SA) plays an important role in plant immune response, including resistance to pathogens and systemic acquired resistance. Two major components, NONEXPRESSOR OF PATHOGENESIS-RELATED GENES (NPRs) and TGACG motif-binding transcription factors (TGAs), are known to mediate SA signaling, which might also be orchestrated by other hormonal and environmental changes. Nevertheless, the molecular and functional interactions between SA signaling components and other cellular signaling pathways remain poorly understood. Here we showed that the steroid plant hormone brassinosteroid (BR) promotes SA responses by inactivating BR-INSENSITIVE 2 (BIN2), which inhibits the redox-sensitive clade I TGAs in Arabidopsis. We found that both BR and the BIN2 inhibitor bikinin synergistically increase SA-mediated physiological responses, such as resistance to Pst DC3000. Our genetic and biochemical analyses indicated that BIN2 functionally interacts with TGA1 and TGA4, but not with other TGAs. We further demonstrated that BIN2 phosphorylates Ser-202 of TGA4, resulting in the suppression of the redox-dependent interaction between TGA4 and NPR1 as well as destabilization of TGA4. Consistently, transgenic Arabidopsis overexpressing TGA4-YFP with a S202A mutation displayed enhanced SA responses compared to the wild-type TGA4-YFP plants. Taken together, these results suggest a novel crosstalk mechanism by which BR signaling coordinates the SA responses mediated by redox-sensitive clade I TGAs.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Fatores de Transcrição de Zíper de Leucina Básica/metabolismo , Brassinosteroides/metabolismo , Brassinosteroides/farmacologia , Regulação da Expressão Gênica de Plantas , Imunidade , Fosforilação , Proteínas Quinases/metabolismo , Ácido Salicílico/metabolismo , Ácido Salicílico/farmacologia , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
10.
Animals (Basel) ; 12(4)2022 Feb 13.
Artigo em Inglês | MEDLINE | ID: mdl-35203169

RESUMO

Hydrological characteristics of freshwater ecosystems are powerful determinants of the distribution of biological communities and changes in environmental factors. This study identified relationships between the wetland environment, rotifer community, and hydrological factors for 48 wetlands, to determine their impact on wetland conservation and management. Different hydrological factors produced different wetland environments, which influenced the rotifer community composition. The wetlands with "poor" "in/outflow function" and "shore stability" levels showed high conductivity, turbidity, depth, and concentrations of total nitrogen, total phosphorus, and chlorophyll a. In contrast, the dissolved oxygen levels and velocity were the highest in wetlands with "good" in/outflow function and shore stability variables. The nutritional status of each wetland affected the composition of the rotifer community. Some genera (Keratella, Brachionus, Anuraeopsis, Trichocerca, and Philodina) were found in wetlands with high concentrations of total nitrogen, total phosphorus, and chlorophyll a, and high turbidity and depth. In contrast, Ascomorpha and Ploesoma were found in wetlands with high dissolved oxygen levels and flow velocity. High densities of Lepadella, Lecane, and Testudinella were found in wetlands completely covered by macrophytes. The rotifer community distribution can be used to understand the trophic, current functional, and environmental status of wetlands.

11.
J Exp Bot ; 73(5): 1415-1428, 2022 03 02.
Artigo em Inglês | MEDLINE | ID: mdl-34718527

RESUMO

Unlike the indispensable function of the steroid hormone brassinosteroid (BR) in regulating plant growth and development, the metabolism of secondary metabolites regulated by BR is not well known. Here we show that BR reduces carotenoid accumulation in Arabidopsis seedlings. BR-deficient or BR-insensitive mutants accumulated higher content of carotenoids than wild-type plants, whereas BR treatment reduced carotenoid content. We demonstrated that BR transcriptionally suppresses 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (HPPD) expression involved in carotenogenesis via plastoquinone production. We found that the expression of HPPD displays an oscillation pattern that is expressed more strongly in dark than in light conditions. Moreover, BR appeared to inhibit HPPD expression more strongly in darkness than in light, leading to suppression of a diurnal oscillation of HPPD expression. BR-responsive transcription factor BRASSINAZOLE RESISTANT 1 (BZR1) directly bound to the promoter of HPPD, and HPPD suppression by BR was increased in the bzr1-1D gain-of-function mutation. Interestingly, dark-induced HPPD expression did not cause carotenoid accumulation, due to down-regulation of other carotenoid biosynthetic genes in the dark. Our results suggest that BR regulates different physiological responses in dark and light through inhibition of HPPD expression.


Assuntos
4-Hidroxifenilpiruvato Dioxigenase , Proteínas de Arabidopsis , Arabidopsis , 4-Hidroxifenilpiruvato Dioxigenase/genética , 4-Hidroxifenilpiruvato Dioxigenase/metabolismo , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Brassinosteroides/metabolismo , Carotenoides/metabolismo , Regulação da Expressão Gênica de Plantas
12.
Animals (Basel) ; 11(12)2021 Dec 07.
Artigo em Inglês | MEDLINE | ID: mdl-34944265

RESUMO

The introduction of exotic species negatively affects the distribution and interactions within local biological communities in an ecosystem and can threaten ecosystem health. This study aimed to provide the basic data required to manage P. clarkii in the Yeongsan River basin. We identified the dispersion pattern and evaluated the ecosystem risk of this newly introduced species. The distribution survey investigated Procambarus clarkii populations at 25 sites in the Yeongsan River basin over a four-year period. The initial introduction occurred in Jiseok Stream. The larvae of P. clarkii were most abundant in areas with a dense aquatic plant cover, whereas adults preferred silt/clay areas. The alterations in the water flow by the river refurbishment project (carried out in 2012) increased their preferred habitats and contributed to P. clarkii dispersion. However, stable isotope analysis showed that the dispersion has had little effect on the freshwater ecosystem. The interrelationship between P. clarkii (i.e., larvae and adults) and other biological communities has been limited. Although the rapid dispersion by P. clarkii in the Yeongsan River basin has not impacted the freshwater ecosystem, further ecological information is required on how to manage P. clarkii beyond this early stage of invasion.

13.
Microorganisms ; 9(9)2021 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-34576856

RESUMO

The acquisition of Antibiotic-Resistance Genes (ARGs) by natural bacteria caused by antibiotic abuse is causing serious problems for human and animal welfare. Here, we evaluated the influence of three cladoceran species on Antibiotic-Resistant Bacteria (ARB) and tetracycline-resistance gene (tet(A)) copies, and discussed the effect of these biological interactions on the distribution and diffusion of ARGs in freshwater ecosystems. Bacterial community and tet(A) abundances in water samples collected from wetlands were strongly influenced by cladoceran presence. The presence of Daphnia obtusa dramatically decreased ARB and tet(A) abundance compared to that with other cladoceran species (Chydorus sphaericus and Simocephalus vetulus). Interestingly, we found a high abundance of Flavobacteriales in the microbiomes of cladoceran species. Considering that Flavobacteriales species are potential carriers of the tet(A) gene, their adsorption and assimilation with cladocerans could significantly impact the reduction of tet(A) in water. Field surveys also showed that tet(A) abundance could be low if the dominance of D. obtusa in each wetland was high. This study highlighted the need for ecological interactions and a broad range of niches in the food web when discussing the fate of ARGs in freshwater ecosystems.

15.
Biology (Basel) ; 10(5)2021 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-34062893

RESUMO

Frequent predation induces various defense strategies in prey, including morphological changes or migration patterns in zooplankton. We hypothesized that the winter dominance of Cyclops vicinus in the Upo Wetlands, South Korea, is an evolved temporal defense mechanism to avoid fish predation. Long-term data (2014-2019) showed that fish consumed the most cyclopoid copepods from spring to autumn. Lepomis macrochirus preferentially consumed C. vicinus; thus, C. vicinus density was lower from spring to autumn. However, C. vicinus was abundant in winter when fish consumed fewer copepods. Nauplii density began to increase in late autumn (October-November), and their population growth was fueled through consumption of Cyclotella sp. and Rhodomonas sp. Culture experiments showed that Cyclotella sp. contributed more to the growth stage (copepodite or subadult) after nauplii than Rhodomonas sp. C. vicinus density was lower in the winters of 2013 and 2016 when the densities of these phytoplankton prey species were lower. In summary, although winter conditions were suitable for copepod survival and population growth, C. vicinus relied heavily on the diversity and species composition of its food sources. The winter dominance of C. vicinus could increase regional biodiversity and contribute significantly to the stability of the freshwater food web.

16.
Plant Signal Behav ; 16(9): 1926130, 2021 09 02.
Artigo em Inglês | MEDLINE | ID: mdl-33980131

RESUMO

The increased level of endogenous abscisic acid (ABA) in brassinosteroid (BR)-deficient mutants, such as det2 and cyp85a1 × cyp85a2, suggests that ABA synthesis is inhibited by endogenous BRs in Arabidopsis thaliana. Expression of the ABA biosynthesis gene ABA-deficient 2 (ABA2) was negatively regulated by exogenously applied BR but up-regulated by the application of brassinazole and in det2 and cyp85a1 × cyp85a2. In addition, ABA2 expression decreased in bzr1-1D, showing that ABA biosynthesis is inhibited by BR signaling via BZR1, intermediated by ABA2, in Arabidopsis. Four cis-element sequences (E-boxes 1-4) in the putative promoter region of ABA2 were identified as BZR1 binding sites. The electrophoretic mobility shift assay and chromatin immune precipitation analysis demonstrated that BZR1 directly binds to overlapped E-boxes (E-box 3/4) in the promoter region of ABA2. The level of endogenous ABA was decreased in bzr1-1D compared to wild-type, indicating that binding of BZR1 to the ABA2 promoter inhibits ABA synthesis in Arabidopsis. Compared to wild-type, aba2-1 exhibited severely reduced growth and development. The abnormalities in aba2-1 were rescued by the application of ABA, suggesting that ABA2 expression and ABA synthesis are necessary for the normal growth and development of A. thaliana. Finally, bzr1-KO × aba2-1 exhibited inhibitory growth of primary roots compared to bzr1-KO, verifying that ABA2 is a downstream target of BZR1 in the plant. Taken together, the level of endogenous ABA is down-regulated by BR signaling via BZR1, controlling the growth of A. thaliana.


Assuntos
Ácido Abscísico/metabolismo , Arabidopsis/crescimento & desenvolvimento , Arabidopsis/genética , Brassinosteroides/metabolismo , Regulação para Baixo/efeitos dos fármacos , Transdução de Sinais/efeitos dos fármacos , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Variação Genética , Genótipo , Mutação
17.
Front Plant Sci ; 12: 639508, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33868337

RESUMO

Brachypodium distachyon is a monocotyledonous model plant that contains castasterone (CS) but no brassinolide (BL) as the end product of brassinosteroids (BR) biosynthesis, indicating dysfunction of BL synthase, which catalyzes the conversion of CS to BL. To increase BR activity, Arabidopsis cytochrome P450 85A2 (AtCYP85A2) encoding BR 6-oxidase/BL synthase was introduced into B. distachyon with the seed-specific promoters pBSU1, pAt5g10120, and pAt5g54000. RT-PCR analysis and GUS activity revealed that AtCYP85A2 was only expressed in the seeds of the transgenic plants pBSU1-AtCYP85A2::Bd21-3, pAt5g10120-AtCYP85A2::Bd21-3, and pAt5g54000-AtCYP85A2::Bd21-3. The crude enzyme prepared from the seeds of these three transgenic plants catalyzed the conversion of 6-deoxoCS to CS. The transgenic plants showed greater specific enzyme activity than the wild-type plant for the conversion of 6-deoxoCS to CS, indicating enhanced BR 6-oxidase activity in the transgenic plants. The enzyme solution also catalyzed the conversion of CS into BL. Additionally, BL was identified from the seeds of transgenic plants, verifying that seed-specific AtCYP85A2 encodes a functional BL synthase to increase BR activity in the seeds of transgenic Brachypodium. In comparison with wild-type Brachypodium, the transgenic plants showed better growth and development during the vegetative growing stage. The flowers of the transgenic plants were remarkably larger, resulting in increments in the number, size, and height of seeds. The total starch, protein, and lipid contents in transgenic plants were higher than those in wild-type plants, indicating that seed-specific expression of AtCYP85A2 improves both grain yield and quality in B. distachyon.

18.
Plant Signal Behav ; 16(2): 1850625, 2021 02 01.
Artigo em Inglês | MEDLINE | ID: mdl-33258709

RESUMO

Quantitative reverse transcription PCR (qRT-PCR) analysis and ProACO2::GUS expression showed that ACO2 was highly expressed in the shoots of Arabidopsis seedlings under light conditions. Exogenously applied aminocyclopropane-1-carboxylic acid (ACC) enhanced the expression of ACO2, whereas Co2+ ions suppressed its expression. In comparison with wild-type seedlings, the ACO2 knockdown mutant aco2-1 produced less ethylene, which resulted in the inhibited growth of Arabidopsis seedlings. Exogenously applied brassinolide reduced the expression of ACO2. ACO2 expression was increased in det2, a brassinosteroid (BR)-deficient mutant; however, it was decreased in bes1-D, a brassinosteroid insensitive 1-EMS-suppressor 1 (BES1)-dominant mutant. In the putative promoter region of ACO2, 11 E-box sequences for BES1 binding but not BR regulatory element sequences for brassinazole-resistant 1 (BZR1) binding were found. Chromatin immunoprecipitation assay showed that BES1 could directly bind to the E-boxes located in the putative promoter region of ACO4. Less ethylene was produced in bes1-D seedlings compared with wild-type seedlings, suggesting that the direct binding of BES1 to the ACO2 promoter may negatively regulate ACO2 expression to control the endogenous level of ethylene in Arabidopsis seedlings.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Brassinosteroides/metabolismo , Proteínas de Ligação a DNA/metabolismo , Aminoácido Oxirredutases/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Imunoprecipitação da Cromatina , Proteínas de Ligação a DNA/genética , Etilenos/metabolismo , Regulação da Expressão Gênica de Plantas/genética , Regulação da Expressão Gênica de Plantas/fisiologia , Plântula/genética , Plântula/fisiologia
19.
Insects ; 11(5)2020 Apr 30.
Artigo em Inglês | MEDLINE | ID: mdl-32365933

RESUMO

In freshwater ecosystems, habitat heterogeneity supports high invertebrate density and diversity, and it contributes to the introduction and settlement of non-native species. In the present study, we identified the habitat preferences and trophic level of Brachydiplax chalybea flavovittata larvae, which were distributed in four of the 17 wetlands we examined in the Yeongsan River basin, South Korea. Larval density varied across four microhabitat types: open water area, and microhabitats dominated by Myriophyllum aquaticum, Paspalum distichum, and Zizania latifolia. Microhabitats dominated by M. aquaticum had the highest larval density, followed by those dominated by P. distichum. The larvae were more prevalent in silt sediments than in plant debris or sand. Stable isotope analysis showed that B. chalybea flavovittata is likely to consume, as a food source, other species of Odonata larvae. We conclude that successful settlement of B. chalybea flavovittata can be attributed to their habitat preferences. As temperature increases due to climate change, the likelihood of B. chalybea flavovittata spreading throughout South Korea increases. We, therefore, recommend continued monitoring of the spread and ecological impacts of B. chalybea flavovittata.

20.
Plant Signal Behav ; 15(4): 1734333, 2020 04 02.
Artigo em Inglês | MEDLINE | ID: mdl-32114884

RESUMO

ProACO4-GUS expression and RT-PCR analysis revealed that ACO4 is predominantly expressed in shoots of Arabidopsis seedlings under light conditions. ACO4-overexpressed mutant 35S-ACO4 produced more ethylene relative to the wild-type, which resulted in reduced growth of Arabidopsis seedlings. The abnormal growth of seedlings recurred after the application of Co2+ ions, suggesting that ACO4 is a functional ACO necessary to regulate the growth and development of Arabidopsis seedlings. Exogenously-applied brassinosteroids (BRs) inhibited the expression of ACO4, and an enhanced ACO4 expression was found in det2, a BR-deficient mutant. Additionally, expression of ACO4 was decreased in bzr1-D (a BZR1-dominant mutant), implying that BR signaling negatively regulates ACO4 expression via BZR1 in Arabidopsis. In the intergenic region of ACO4, four E-boxes and a BR regulatory element (BRRE) are found. Electrophoretic mobility shift and chromatin immunoprecipitation assays showed that BZR1 binds directly to the BRRE in the putative promoter region of ACO4. By binding of BZR1 to BRRE, less ethylene was produced, which seems to regulate the growth and development of Arabidopsis seedlings.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/genética , Brassinosteroides/metabolismo , Proteínas de Ligação a DNA/metabolismo , Regulação para Baixo , Liases/genética , Liases/metabolismo , Plântula/enzimologia , Transdução de Sinais , Arabidopsis/efeitos dos fármacos , Arabidopsis/metabolismo , Brassinosteroides/farmacologia , Regulação para Baixo/efeitos dos fármacos , Regulação para Baixo/genética , Regulação da Expressão Gênica de Plantas/efeitos dos fármacos , Plântula/genética , Plântula/crescimento & desenvolvimento
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