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2.
PLoS Negl Trop Dis ; 16(5): e0009959, 2022 05.
Artigo em Inglês | MEDLINE | ID: mdl-35584143

RESUMO

BACKGROUND: Leptospirosis, caused by Leptospira bacteria, is a common zoonosis worldwide, especially in the tropics. Reservoir species and risk factors have been identified but surveys for environmental sources are rare. Furthermore, understanding of environmental Leptospira containing virulence associated genes and possibly capable of causing disease is incomplete, which may convolute leptospirosis diagnosis, prevention, and epidemiology. METHODOLOGY/PRINCIPAL FINDINGS: We collected environmental samples from 22 sites in Puerto Rico during three sampling periods over 14-months (Dec 2018-Feb 2020); 10 water and 10 soil samples were collected at each site. Samples were screened for DNA from potentially pathogenic Leptospira using the lipL32 PCR assay and positive samples were sequenced to assess genetic diversity. One urban site in San Juan was sampled three times over 14 months to assess persistence in soil; live leptospires were obtained during the last sampling period. Isolates were whole genome sequenced and LipL32 expression was assessed in vitro. We detected pathogenic Leptospira DNA at 15/22 sites; both soil and water were positive at 5/15 sites. We recovered lipL32 sequences from 83/86 positive samples (15/15 positive sites) and secY sequences from 32/86 (10/15 sites); multiple genotypes were identified at 12 sites. These sequences revealed significant diversity across samples, including four novel lipL32 phylogenetic clades within the pathogenic P1 group. Most samples from the serially sampled site were lipL32 positive at each time point. We sequenced the genomes of six saprophytic and two pathogenic Leptospira isolates; the latter represent a novel pathogenic Leptospira species likely belonging to a new serogroup. CONCLUSIONS/SIGNIFICANCE: Diverse and novel pathogenic Leptospira are widespread in the environment in Puerto Rico. The disease potential of these lineages is unknown but several were consistently detected for >1 year in soil, which could contaminate water. This work increases understanding of environmental Leptospira diversity and should improve leptospirosis surveillance and diagnostics.


Assuntos
Leptospira , Leptospirose , Humanos , Leptospirose/epidemiologia , Leptospirose/microbiologia , Filogenia , Porto Rico/epidemiologia , Solo , Água
3.
J Epidemiol Community Health ; 75(11): 1044-1049, 2021 11.
Artigo em Inglês | MEDLINE | ID: mdl-33757989

RESUMO

BACKGROUND: The coronavirus disease pandemic has disproportionately affected poor and racial/ethnic minority individuals and communities, especially Indigenous Peoples. The object of this study is to understand the spatially varying associations between socioeconomic disadvantages and the number of confirmed COVID-19 cases in New Mexico at the ZIP code level. METHODS: We constructed ZIP code-level data (n=372) using the 2014-2018 American Community Survey and COVID-19 data from the New Mexico Department of Health (as of 24 May 2020). The log-linear Poisson and geographically weighted Poisson regression are applied to model the number of confirmed COVID-19 cases (total population as the offset) in a ZIP code. RESULTS: The number of confirmed COVID-19 cases in a ZIP code is positively associated with socioeconomic disadvantages-specifically, the high levels of concentrated disadvantage and income inequality. It is also positively associated with the percentage of American Indian and Alaskan Native populations, net of other potential confounders at the ZIP code level. Importantly, these associations are spatially varying in that some ZIP codes suffer more from concentrated disadvantage than others. CONCLUSIONS: Additional attention for COVID-19 mitigation effort should focus on areas with higher levels of concentrated disadvantage, income inequality, and higher percentage of American Indian and Alaska Native populations as these areas have higher incidence of COVID-19. The findings also highlight the importance of plumbing in all households for access to clean and safe water, and the dissemination of educational materials aimed at COVID-19 prevention in non-English language including Indigenous languages.


Assuntos
COVID-19 , Estudos Transversais , Etnicidade , Humanos , Renda , Povos Indígenas , Grupos Minoritários , New Mexico/epidemiologia , SARS-CoV-2 , Fatores Socioeconômicos
4.
Emerg Infect Dis ; 26(11): 2773-2775, 2020 11.
Artigo em Inglês | MEDLINE | ID: mdl-33079041

RESUMO

The distribution of Burkholderia pseudomallei in the Caribbean is poorly understood. We isolated B. pseudomallei from US Virgin Islands soil. The soil isolate was genetically similar to other isolates from the Caribbean, suggesting that B. pseudomallei might have been introduced to the islands multiple times through severe weather events.


Assuntos
Burkholderia pseudomallei , Melioidose , Microbiologia do Solo , Burkholderia pseudomallei/genética , Humanos , Ilhas , Melioidose/epidemiologia , Filogenia , Ilhas Virgens Americanas
5.
Public Health Nutr ; 23(17): 3104-3113, 2020 12.
Artigo em Inglês | MEDLINE | ID: mdl-32799964

RESUMO

OBJECTIVE: To determine if a global mid-upper arm circumference (MUAC) cut-off can be established to classify underweight in adults (men and non-pregnant women). DESIGN: We conducted an individual participant data meta-analysis (IPDMA) to explore the sensitivity (SENS) and specificity (SPEC) of various MUAC cut-offs for identifying underweight among adults (defined as BMI < 18·5 kg/m2). Measures of diagnostic accuracy were determined every 0·5 cm across MUAC values from 19·0 to 26·5 cm. A bivariate random effects model was used to jointly estimate SENS and SPEC while accounting for heterogeneity between studies. Various subgroup analyses were performed. SETTING: Twenty datasets from Africa, South Asia, Southeast Asia, North America and South America were included. PARTICIPANTS: All eligible participants from the original datasets were included. RESULTS: The total sample size was 13 835. Mean age was 32·6 years and 65 % of participants were female. Mean MUAC was 25·7 cm, and 28 % of all participants had low BMI (<18·5 kg/m2). The area under the receiver operating characteristic curve for the pooled dataset was 0·91 (range across studies 0·61-0·98). Results showed that MUAC cut-offs in the range of ≤23·5 to ≤25·0 cm could serve as an appropriate screening indicator for underweight. CONCLUSIONS: MUAC is highly discriminatory in its ability to distinguish adults with BMI above and below 18·5 kg/m2. This IPDMA is the first step towards determining a global MUAC cut-off for adults. Validation studies are needed to determine whether the proposed MUAC cut-off of 24 cm is associated with poor functional outcomes.


Assuntos
Braço , Magreza , Adulto , África , Antropometria , Braço/anatomia & histologia , Ásia , Índice de Massa Corporal , Estudos Transversais , Feminino , Humanos , Masculino , América do Norte , América do Sul
6.
Front Sociol ; 5: 610355, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33869526

RESUMO

The Coronavirus 2019 (COVID-19) pandemic has disproportionally affected Indigenous Peoples. Unfortunately, there is no accurate understanding of COVID-19's impacts on Indigenous Peoples and communities due to systematic erasure of Indigenous representation in data. Early evidence suggests that COVID-19 has been able to spread through pre-pandemic mechanisms ranging from disproportionate chronic health conditions, inadequate access to healthcare, and poor living conditions stemming from structural inequalities. Using innovative data, we comprehensively investigate the impacts of COVID-19 on Indigenous Peoples in New Mexico at the zip code level. Specifically, we expand the U.S. Centers for Disease Control and Prevention's Social Vulnerability Index (SVI) to include the measures of structural vulnerabilities from historical racisms against Indigenous Peoples. We found that historically-embedded structural vulnerabilities (e.g., Tribal land status and higher percentages of house units without telephone and complete plumbing) are critical in understanding the disproportionate burden of COVID-19 that American Indian and Alaska Native populations are experiencing. We found that historically-embedded vulnerability variables that emerged epistemologically from Indigenous knowledge had the largest explanatory power compared to other social vulnerability factors from SVI and COVID-19, especially Tribal land status. The findings demonstrate the critical need in public health to center Indigenous knowledge and methodologies in mitigating the deleterious impacts of COVID-19 on Indigenous Peoples and communities, specifically designing place-based mitigating strategies.

7.
Perm J ; 242019.
Artigo em Inglês | MEDLINE | ID: mdl-31710837

RESUMO

CONTEXT: Parkinson disease (PD) can be physically, emotionally, and financially burdensome. Understanding its impact from the patient's perspective is an important way to sensitize clinicians to the challenges of living with PD. OBJECTIVE: To evaluate whether a book-length graphic memoir (an illness story in comic form) can help clinicians appreciate PD from the patient's perspective. DESIGN: A convergent mixed-methods study of clinicians working in a multidisciplinary movement disorders clinic. Participants read My Degeneration and completed preintervention and post-intervention questionnaires. They also attended a book group discussion. Quantitative findings were compared before and after the intervention, and qualitative data were analyzed for themes. MAIN OUTCOME MEASURES: Clinicians': 1) confidence in understanding patients' experiences with PD, 2) knowledge about PD, and 3) empathy toward patients and families. RESULTS: After reading the book, participants' confidence in understanding patients' experiences with PD increased significantly in the areas of stigma and disease impact on patients and families. Clinical knowledge was unchanged. Qualitative analysis revealed 3 main themes: 1) the book provides a meaningful way for clinicians to learn about the experience of living with PD; 2) the medium of comics engages clinicians in ways different from other mediums; and 3) benefits of the book may extend beyond the clinical team. CONCLUSION: Clinicians who read My Degeneration gained insight into the psychosocial effects of PD on patients and their loved ones. The book helped facilitate deeper understanding of patients' experiences living with PD and fostered greater empathy and self-reflection.


Assuntos
Livros , Empatia , Conhecimentos, Atitudes e Prática em Saúde , Doença de Parkinson/psicologia , Adulto , Atitude do Pessoal de Saúde , Competência Clínica , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Autoeficácia , Centros de Atenção Terciária
8.
Stud Health Technol Inform ; 257: 526-539, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-30741251

RESUMO

Studies often rely on medical record abstraction as a major source of data. However, data quality from medical record abstraction has long been questioned. Electronic Health Records (EHRs) potentially add variability to the abstraction process due to the complexity of navigating and locating study data within these systems. We report training for and initial quality assessment of medical record abstraction for a clinical study conducted by the IDeA States Pediatric Clinical Trials Network (ISPCTN) and the Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) Neonatal Research Network (NRN) using medical record abstraction as the primary data source. As part of overall quality assurance, study-specific training for medical record abstractors was developed and deployed during study start-up. The training consisted of a didactic session with an example case abstraction and an independent abstraction of two standardized cases. Sixty-nine site abstractors from thirty sites were trained. The training was designed to achieve an error rate for each abstractor of no greater than 4.93% with a mean of 2.53%, at study initiation. Twenty-three percent of the trainees exceeded the acceptance limit on one or both of the training test cases, supporting the need for such training. We describe lessons learned in the design and operationalization of the study-specific, medical record abstraction training program.


Assuntos
Erros Médicos , Prontuários Médicos , Indexação e Redação de Resumos , Criança , Humanos , Armazenamento e Recuperação da Informação , Projetos de Pesquisa
10.
J Pediatr ; 163(5): 1377-83.e1-3, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-23993129

RESUMO

OBJECTIVE: To characterize the rates, root causes, and clinical effects of unintentional exposures to buprenorphine sublingual formulations among young children and to determine whether exposure characteristics differ between formulations. STUDY DESIGN: Unintentional exposures to buprenorphine-containing products among children 28 days to less than 6 years old were collected from the Researched Abuse, Diversion, and Addiction-Related Surveillance System Poison Center Program and Reckitt Benckiser Pharmaceuticals' pharmacovigilance system from October 2009-March 2012. After adjustment for drug availability, negative binomial regression was used to estimate average exposure rates. Root cause assessment was conducted, and an expert clinician panel adjudicated causality and severity of moderate to severe adverse events (AEs). RESULTS: A total of 2380 cases were reviewed, including 4 deaths. Exposures to buprenorphine-naloxone combination film were significantly less frequent than exposures to buprenorphine tablets (rate ratio 3.5 [95% CI, 2.7-4.5]) and buprenorphine-naloxone combination tablets (rate ratio 8.8 [7.2-10.6]). The most commonly identified root causes were medication stored in sight, accessed from a bag or purse, and not stored in the original packaging. Among 536 panel review cases, the most common AEs reported for all formulations were lethargy, respiratory depression, miosis, and vomiting. The highest level AE severity did not differ significantly by formulation. CONCLUSIONS: Unintentional exposure to buprenorphine can cause central nervous system depression, respiratory depression, and death in young children. Exposure rates to film formulations are significantly less than to tablet formulations. Package and storage deficiencies contribute to unintentional exposures in young children.


Assuntos
Buprenorfina/efeitos adversos , Buprenorfina/intoxicação , Administração Sublingual , Analgésicos Opioides/efeitos adversos , Analgésicos Opioides/intoxicação , Sistema Nervoso Central/efeitos dos fármacos , Pré-Escolar , Estudos Transversais , Embalagem de Medicamentos , Feminino , Humanos , Lactente , Masculino , Farmacovigilância , Centros de Controle de Intoxicações , Sistema de Registros , Análise de Regressão , Estudos Retrospectivos , Comprimidos , Estados Unidos
11.
Arch Virol ; 154(11): 1823-9, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19763776

RESUMO

The Pan-American Health Organization established a rotavirus pre-vaccination disease burden and strain surveillance network in Latin America and the Caribbean in 2004. During strain surveillance in Ecuador in 2005-2006, a rare rotavirus genotype, G11P[6], was detected among common strains. Sequencing and phylogenetic analysis of this strain identified a novel lineage of the G11 VP7 gene, most closely related to A253 (91.8% nt identity), a porcine rotavirus strain identified in Venezuela. Most genes of this strain clustered with porcine, human-porcine or bovine-porcine reassortant strains; only VP6 and perhaps NSP2 genes were more closely related to cognate genes of human rotaviruses. Thus, this strain was likely generated by gene reassortment between porcine and human parental strains. Our study provides further evidence that animal rotaviruses play an important role in genetic and antigenic diversity of rotaviruses pathogenic for humans.


Assuntos
Infecções por Rotavirus/virologia , Rotavirus/classificação , Rotavirus/genética , Animais , Equador/epidemiologia , Feminino , Regulação Viral da Expressão Gênica/fisiologia , Humanos , Lactente , Filogenia , Vigilância da População , Infecções por Rotavirus/epidemiologia , Suínos , Proteínas Virais/genética , Proteínas Virais/metabolismo
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