Quantification of Microbial Communities in Subsurface Marine Sediments of the Black Sea and off Namibia.

Organic-rich subsurface marine sediments were taken by gravity coring up to a depth of 10 m below seafloor at six stations from the anoxic Black Sea and the Benguela upwelling system off Namibia during the research cruises Meteor 72-5 and 76-1, respectively. The quantitative microbial community composition at various sediment depths was analyzed using total cell counting, catalyzed reporter deposition - fluorescence in situ hybridization (CARD-FISH) and quantitative real-time PCR (Q-PCR). Total cell counts decreased with depths from 10(9) to 10(10) cells/mL at the sediment surface to 10(7)-10(9) cells/mL below one meter depth. Based on CARD-FISH and Q-PCR analyses overall similar proportions of Bacteria and Archaea were found. The down-core distribution of prokaryotic and eukaryotic small subunit ribosomal RNA genes (16S and 18S rRNA) as well as functional genes involved in different biogeochemical processes was quantified using Q-PCR. Crenarchaeota and the bacterial candidate division JS-1 as well as the classes Anaerolineae and Caldilineae of the phylum Chloroflexi were highly abundant. Less abundant but detectable in most of the samples were Eukarya as well as the metal and sulfate-reducing Geobacteraceae (only in the Benguela upwelling influenced sediments). The functional genes cbbL, encoding for the large subunit of RuBisCO, the genes dsrA and aprA, indicative of sulfate-reducers as well as the mcrA gene of methanogens were detected in the Benguela upwelling and Black Sea sediments. Overall, the high organic carbon content of the sediments goes along with high cell counts and high gene copy numbers, as well as an equal abundance of Bacteria and Archaea.

Quantitative microbial community analysis of three different sulfidic mine tailing dumps generating acid mine drainage.

The microbial communities of three different sulfidic and acidic mine waste tailing dumps located in Botswana, Germany, and Sweden were quantitatively analyzed using quantitative real-time PCR (Q-PCR), fluorescence in situ hybridization (FISH), catalyzed reporter deposition-FISH (CARD-FISH), Sybr green II direct counting, and the most probable number (MPN) cultivation technique. Depth profiles of cell numbers showed that the compositions of the microbial communities are greatly different at the three sites and also strongly varied between zones of oxidized and unoxidized tailings. Maximum cell numbers of up to 10(9) cells g(-1) dry weight were determined in the pyrite or pyrrhotite oxidation zones, whereas cell numbers in unoxidized tailings were significantly lower. Bacteria dominated over Archaea and Eukarya at all tailing sites. The acidophilic Fe(II)- and/or sulfur-oxidizing Acidithiobacillus spp. dominated over the acidophilic Fe(II)-oxidizing Leptospirillum spp. among the Bacteria at two sites. The two genera were equally abundant at the third site. The acidophilic Fe(II)- and sulfur-oxidizing Sulfobacillus spp. were generally less abundant. The acidophilic Fe(III)-reducing Acidiphilium spp. could be found at only one site. The neutrophilic Fe(III)-reducing Geobacteraceae as well as the dsrA gene of sulfate reducers were quantifiable at all three sites. FISH analysis provided reliable data only for tailing zones with high microbial activity, whereas CARD-FISH, Q-PCR, Sybr green II staining, and MPN were suitable methods for a quantitative microbial community analysis of tailings in general.

High variation in sperm precedence and last male advantage in the scorpionfly Panorpa germanica L. (Mecoptera, Panorpidae): possible causes and consequences.

In the last decades, many insect species have been studied in terms of sperm competition. Patterns of sperm use are often inferred from the mean species value of P(2), defined as the mean proportion of offspring sired by the second male in double-mating trials. In Panorpa germanica (Mecoptera, Panorpidae), P(2) largely depends on relative copulation durations of both males, but with the second male on average having some advantage over the first male. Estimating the presence of fertile sperm inside the female's reproductive tract in relation to time after copulation we conclude this partial last male sperm precedence not to be caused by natural death, loss, or depletion of first male sperm. Estimating sperm transfer rates of both mates of a female we, furthermore, found that the high intraspecific variance in P(2) that can be observed cannot solely be explained by variances in sperm transfer rates among P. germanica males. Other factors possibly causing the observed patterns of paternity success are discussed.

A male sex pheromone in a scorpionfly.

It has been postulated that males of a number of scorpionfly species produce sex pheromones. This is based on the observation that females often respond only to conspecific males when they evert their genital pouch, the proposed site of pheromone release. In this study, we prove that in Panorpa germanica (Mecoptera, Panorpidae), the eversion of a male's genital pouch is associated with the release of a volatile sex pheromone. In dual choice situations, females showed a high preference for 'calling' (males with everted genital pouch) over noncalling individuals. Volatiles emitted by males and females were collected and identified by coupled gas chromatography-mass spectrometry. Two aldehydes [(2E,6Z)-nona-2,6-dienal and (E)-non-2-enal] were characteristic of calling males but not of noncalling or immature males or females. Bioassays with synthetic compounds confirmed that the identified substances are attractive to females. To the best of our knowledge, this is the first identification of a sex pheromone in scorpionflies.