Genetic mixed-stock analysis of lake-run brown trout Salmo trutta fishery catches in the Inari Basin, northern Finland: implications for conservation and management.

Genetic mixed-stock analysis (MSA) of wild lake-run brown trout Salmo trutta fishery catches (n = 665) from the Inari Basin (northern Finland) between 2006 and 2008 was carried out using a previously characterized baseline with 30 populations (n = 813) and 13 microsatellite loci. Altogether, 12 populations contributed significantly to mixed-stock fisheries, with the Ivalojoki system being the major contributor (70%) to the total catch. When catches were analysed regionally, geographically nearby populations were the main contributors to the local catches, indicating that a large proportion of S. trutta occupy lacustrine areas near the natal river mouth rather than dispersing throughout the lake. Similarly, far upstream populations contributed insignificantly to catches. These findings have important implications for the conservation and sustainable fishery management of the Inari system.

Stock-specific variation of trophic position, diet and environmental stress markers in Atlantic salmon Salmo salar during feeding migrations in the Baltic Sea.

This study investigated stock-specific variation in selected ecophysiological variables during the feeding migrations of Atlantic salmon Salmo salar in the Baltic Sea. Oxidative stress biomarkers and EROD (ethoxyresorufin-O-deethylase, Cyp1A enzyme) activity were used as indicators of possible environmental stress and stable isotopes as determinants of diet and trophic position. Latvian S. salar stocks Daugava and Gauja had distinct stable-isotope signatures compared to the other stocks, indicating differences in migration patterns, residency or arrival times, or dietary specialization among stocks. Salmo salar originating from Daugava and Gauja also had lower catalase enzyme activity than the other stocks. Post-smolts originating from rivers of the Gulf of Finland had elevated EROD activities compared to fish of the same age from Bothnian Bay rivers, which could indicate exposure to organochlorine pollutants. No other stock-specific differences in oxidative stress biomarkers were found. The study demonstrates how genetic, oxidative stress biomarker, EROD and stable-isotope data may be combined to study trophic position, prey prevalence and environmental stress of mixed S. salar stocks foraging in the sea.

High level of population genetic structuring in lake-run brown trout, Salmo trutta, of the Inari Basin, northern Finland.

Rivers draining into (Lake) Inarijärvi, northern Finland, sustain a number of lake-run brown trout, Salmo trutta, populations but, as with most lake-run S. trutta systems, the level of population genetic structuring among populations is unknown. To address this and to assist fish stock management in the region, the population genetic structure of S. trutta collected from 28 sampling sites in rivers flowing into Inarijärvi was studied using 13 microsatellite loci. Populations were clustered into three separate groups, largely corresponding to geographic regions, with between-region F(ST) values ranging from 0·11 to 0·16. The significant differentiation observed between most populations within each region also implies that individual populations should be recognized as separate management units and actions to improve, and subsequently maintain, conditions for natural spawning should be prioritized. The results of this study further indicate that the trout from each of these regions may have different biological characteristics, such as local-lake feeding behaviour among the western populations and strong isolation among the northern stocks. As a consequence, further research is warranted to better understand the level of ecological uniqueness of lake-run S. trutta populations.

Divergent trends in life-history traits between Atlantic salmon Salmo salar of wild and hatchery origin in the Baltic Sea.

Four Atlantic salmon Salmo salar stocks in the Baltic Sea, varying in their breeding history, were studied for changes in life-history traits over the years 1972-1995. Total length (L(T)) at age of captured (L(TC)) fish had increased throughout the study period, partly due to increased temperature and increased L(T) at release, (L(TR)) but also due to remaining cohort effects that could represent unaccounted environmental or genetic change. Simultaneously, maturation probabilities controlled for water temperature, L(TC) and L(TR) had increased in all stocks. The least change was observed in the River Tornionjoki S. salar that was subject only to supportive stockings originating from wild parents. These results suggest a long-term divergence between semi-natural and broodstock-based S. salar stocks. Increased L(T) at age explained advanced maturation only marginally, and it remains an open question to what extent the generally increased probabilities to mature at early age reflected underlying genetic changes.

Extensive immigration from compensatory hatchery releases into wild Atlantic salmon population in the Baltic sea: spatio-temporal analysis over 18 years.

Genetic homogenization has been recognized as a serious threat in an increasing number of species, including many salmonid fishes. We assessed the rate and impact of immigration from the main hatchery stocks of Atlantic salmon in the Gulf of Bothnia into one of the largest wild salmon populations in the Baltic Sea, the River Vindelälven, within a temporal framework of 18 years (from 1985-2003). We provide genetic evidence based on mtDNA and microsatellite markers, using mixed-stock analysis, that a large proportion (66%) of fin-damaged spawners (n=181) caught in the Ume/Vindelälven during 1997-2003 originated from the hatcheries in the Rivers Angermanälven, Luleälven and Ljusnan. The maximum-likelihood estimate of immigration rate from these hatcheries into the wild Vindelälven population was 0.068 (95% CI 0.021-0.128) over the studied time period (1985-2003) and reached up to a quarter (m=0.249, 95% CI 0.106-0.419) of the total population during 1993-2000. This resulted in significant (P<0.01) genetic homogenization trend between the wild Vindelälven population and hatchery stocks of the Angermanälven and Luleälven. Our results demonstrate extensive straying from geographically distant hatchery releases into wild salmon population and emphasize the genetic risks associated with current large-scale stocking practices in the Baltic Sea.

Effect of maternal and paternal line on spatial and temporal marine distribution in Atlantic salmon.

We examined the inheritance of the sea migration pattern of Atlantic salmon, Salmo salar, in a crossing and tagging experiment in the Baltic Sea. Individuals from the parental stocks, Neva and Iijoki, and their reciprocal hybrids were released as 2-year-old smolts, into the same estuary of the Bothnian Sea in 1994. Two thousand smolts from each of the four groups were marked with Carlin tags. The recapture rate of the tags was nearly 10%. We used log-linear models to analyse the marine distribution of the salmon groups from the tag recovery data. The pure stocks and their pooled hybrid groups all showed statistically significant differences between each other in spatial and temporal sea distribution. The Iijoki salmon were more frequently (9%) caught outside the Bothnian Sea than were the Neva salmon (2%). The majority of the Iijoki salmon (55%), but fewer Neva salmon (40%), were caught in the second sea year. In spatial distribution, the hybrids seemed to be intermediate between the parental stocks, with no differences between reciprocal female and male lines. In duration of sea migration and age at maturity, however, the hybrids were very similar to their maternal line, the effect of which was thus clearly stronger than that of the paternal line. Copyright 2000 The Association for the Study of Animal Behaviour.