Characterization of Fungi Associated with Olive Fruit Rot and Olive Oil Degradation in Crete, Southern Greece.

In November 2019, a severe outbreak of fruit rot was observed in olive orchards in Crete, southern Greece. Symptoms appeared primarily on fruits and stalks, resembling those caused by anthracnose. Typical symptoms were fruit rot, shrinkage, and mummification, associated commonly with stalk discoloration and fruit drop. Disease incidence was estimated at up to 100% in some cases, and an unprecedented increase in olive oil acidity reaching up to 8% (percentage of oleic acid) in severely affected olive groves was recorded. Thirty-two olive groves were then surveyed, and samples of fruit, stalk, leaf, and shoot were collected. Visual, stereoscopic, and microscopic observations revealed several fungi belonging to the genera Alternaria, Botryosphaeria, Capnodium, Colletotrichum, Fusarium, and Pseudocercospora. Fungal infection in fruits was commonly associated with concomitant infestation by the olive fruit fly Bactrocera oleae along with increased air temperature and relative humidity conditions that prevailed in October and November 2019. Twenty representative fungal strains isolated from symptomatic fruits and stalks were characterized by morphological, physiological, and molecular analyses. By internal transcribed spacer regions of ribosomal DNA region and translation elongation factor 1-α gene sequencing analysis, these isolates were identified as Alternaria spp., A. infectoria, Botryosphaeria dothidea, Colletotrichum boninense sensu lato, Fusarium lateritium, F. solani species complex and Stemphylium amaranthi. Pathogenicity tests on punctured fruits revealed that all isolates were pathogenic; however, F. solani isolates along with B. dothidea were the most virulent, and wounds were necessary for efficient fungal infection. Moreover, as few as 10 spores of F. solani were sufficient to cause significant infection in punctured fruits. F. solani was also capable of infecting olive fruits in the presence of B. oleae, with no additional wounding, in artificial inoculation experiments. Moreover, it was capable of colonizing and affecting olive blossoms. Further analyses of olive oil extracted from fruits artificially inoculated with F. solani indicated a significant increase in oil acidity, K232, K270, and peroxide value, whereas total phenol content was significantly decreased. To the best of our knowledge, this is the first report of F. solani associated with olive fruit rot and olive oil degradation worldwide.

Optimal irrigation planning for addressing current or future water scarcity in Mediterranean tree crops.

Water scarcity in the Mediterranean region is becoming a growing concern, threatening the viability of agriculture, which is one of the main economic sectors in many areas. The design of an optimal irrigation management plan, based on state-of-the-art measuring and modeling tools, can effectively contribute towards water saving efforts and potentially address the water scarcity issue in the region. This paper describes the development and application of an integrated decision-making system for the management of water resources of olive and citrus crops in the North of Chania, Crete, Greece. The system integrates different field measurements, for example 2088 soil moisture measurements taken within the study area, and modeling approaches to simulate flow in the unsaturated zone. After the successful calibration and validation of the model, the spatio-temporal representation of soil moisture and pore water pressure were used as guidance for developing optimal irrigation plans, taking into account the water needs of olive and citrus crops, aiming to maximize crop yield, agricultural income, and promote water saving efforts. According to the results, water use can be reduced by up to 36% during the dry season, compared to conventional irrigation practices for citrus trees. Similarly, for olive trees, the reduction in water use can reach up to 41%. The proposed methodology can also be cost-effective in terms of water value, saving about 40% from the typical water cost for irrigation in the study area. The impact of climate change on water resources availability in the area and water conservation efforts were also investigated for the period of (2019-2030). Results show that, comparing the Baseline, RCP 8.5 and RCP 4.5 climatic scenarios, the highest savings on average are observed for emission scenario RCP 4.5 with 53.3% water savings for olive trees and 46.7% for citrus trees.

Characterization of Fungi Associated With Wood Decay of Tree Species and Grapevine in Greece.

A two-year survey was conducted to identify fungi associated with wood decay in a range of tree species and grapevine. Fifty-eight fungal strains isolated from plants of 18 species showing typical wood decay symptoms were characterized by morphological, physiological, and molecular analyses. By 5.8S rRNA gene-ITS sequencing analysis, these isolates were classified into 25 distinct operational taxonomic units, including important phytopathogenic species of the phyla Pezizomycotina and Agaricomycotina, such as Fomitiporia, Inonotus, Phellinus, Inocutis, Fuscoporia, Trametes, Fusarium, Eutypa, Phaeomoniella, Phaeoacremonium, and Pleurostomophora spp. The white rot basidiomycetes Fomitiporia mediterranea (20 isolates, 34.5%) and Inonotus hispidus (6 isolates, 10.3%) were the most prevalent. Pathogenicity tests revealed for the first time that certain fungal species of the genera Fomitiporia, Inonotus, Phellinus, Pleurostomophora, and Fusarium caused wood infection of various tree species in Greece and worldwide. To the best of our knowledge, this is the first report of F. mediterranea as the causal agent of wood decay in pear, pomegranate, kumquat, and silk tree. This is also the first record of Inonotus hispidus, Phellinus pomaceus, Pleurostomophora richardsiae, and Fusarium solani in apple, almond, avocado, and mulberry tree, respectively, whereas P. richardsiae was associated with wood infection of olive tree for the first time in Greece. Cross pathogenicity tests with F. mediterranea strains originated from grapevine applied on other woody hosts and from olive on grapevine demonstrated partial host specificity of the fungus. The potential of F. mediterranea to transinfect hosts other than those originated, along with the host range extension of the fungus, is discussed.

A GIS policy approach for assessing the effect of fertilizers on the quality of drinking and irrigation water and wellhead protection zones (Crete, Greece).

Fertilizers have undoubtedly contributed to the significant increase in yields worldwide and therefore to the considerable improvement of quality of life of man and animals. Today, attention is focussed on the risks imposed by agricultural fertilizers. These effects include the dissolution and transport of excess quantities of fertilizer major- and trace-elements to the groundwater that deteriorate the quality of drinking and irrigation water. In this study, a map for the Fertilizer Water Pollution Index (FWPI) was generated for assessing the impact of agricultural fertilizers on drinking and irrigation water quality. The proposed methodology was applied to one of the most intensively cultivated with tree crops area in Crete (Greece) where potential pollutant loads are derived exclusively from agricultural activities and groundwater is the main water source. In this region of 215 km2, groundwater sampling data from 235 wells were collected over a 15-year time period and analyzed for the presence of anionic (ΝΟ-3, PO-34) and cationic (K+1, Fe+2, Mn+2, Zn+2, Cu+2, B+3) fertilizer trace elements. These chemicals are the components of the primary fertilizers used in local tree crop production. Eight factors/maps were considered in order to estimate the spatial distribution of groundwater contamination for each fertilizer element. The eight factors combined were used to generate the Fertilizer Water Pollution Index (FWPI) map indicating the areas with drinking/irrigation water pollution due to the high groundwater contamination caused by excessive fertilizer use. Moreover, by taking into consideration the groundwater flow direction and seepage velocity, the pathway through which groundwater supply become polluted can be predicted. The groundwater quality results show that a small part of the study area, about 8 km2 (3.72%), is polluted or moderately polluted by the excessive use of fertilizers. Considering that in this area drinking water sources (wells) are located, this study highlights an analytic method for delineation wellhead protection zones. All these approaches were incorporated in a useful GIS decision support system that aids decision makers in the difficult task of protection groundwater resources.

Organic olive orchards on sloping land: more than a specialty niche production system?

Five organic Sloping and Mountainous Olive Plantation Production Systems (SMOPS) have been studied in four olive-producing areas in four European countries (Spain, Italy, Greece and Portugal). Results indicate that these SMOPS provide ecological, economic and social benefits to the regions in which they are located, although most of these benefits are not strictly limited to the organic production systems. Erosion control and organic matter balance remain significant issues in four of the SMOPS and we suggest that subsidy support should be conditional on the implementation of additional soil and water conservation measures that should be provided with specific funding. Most of the SMOPS will remain dependent on a similar level of support in order for olive production to remain economically feasible. The lower profitability compared to non-organic olive production systems suggests that there is limited scope for expansion of organic olive production, although in the study areas where there is little such production, such as Western Crete (Greece) and Basilicata-Salerno (Italy) the scope remains great. The analysis of the reasons for the beneficial effects of olive cultivation in the areas studied indicates that in most cases soil management techniques adopted in or recommended for organic production systems could provide similar benefits in other production systems as well.