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1.
Eur J Heart Fail ; 25(11): 1936-1943, 2023 11.
Artigo em Inglês | MEDLINE | ID: mdl-37642195

RESUMO

AIM: Epicardial adipose tissue (EAT) plays a role in obesity-related heart failure with preserved ejection fraction. However, the association of EAT thickness with the development of cardiac dysfunction in subjects with severe obesity without known cardiovascular disease is unclear. The aim of this study was to determine the association between EAT thickness and cardiac dysfunction and describe the potential value of EAT as an early marker of cardiac dysfunction. METHODS AND RESULTS: Subjects with body mass index ≥35 kg/m2 aged 35 to 65 years, who were referred for bariatric surgery, without suspicion of or known cardiac disease, were enrolled. Conventional transthoracic echocardiography and strain analyses were performed. A total of 186 subjects were divided into tertiles based on EAT thickness, of whom 62 were in EAT-1 (EAT <3.8 mm), 63 in EAT-2 (EAT 3.8-5.4 mm), and 61 in EAT-3 (EAT >5.4 mm). Parameters of systolic and diastolic function were comparable between tertiles. Patients in EAT-3 had the lowest global longitudinal strain (GLS) and left atrial contractile strain (LASct). Linear regression showed that a one-unit increase in EAT thickness (mm) was independently associated with a decrease in GLS (%) (ß coefficient -0.404, p = 0.002), and a decrease in LASct (%) (ß coefficient -0.544, p = 0.027). Furthermore, EAT-3 independently predicted cardiac dysfunction as defined by a GLS <18% (odds ratio 2.8, p = 0.013) and LASct <14% (odds ratio 2.5, p = 0.045). CONCLUSIONS: Increased EAT thickness in subjects with obesity without known cardiac disease was independently associated with subclinical cardiac dysfunction. Our findings suggest that EAT might play a role in the early stages of cardiac dysfunction in obesity before this may progress to overt clinical disease.


Assuntos
Insuficiência Cardíaca , Obesidade Mórbida , Humanos , Obesidade Mórbida/complicações , Tecido Adiposo/diagnóstico por imagem , Obesidade/complicações , Pericárdio/diagnóstico por imagem
2.
Int J Cardiovasc Imaging ; 39(3): 471-479, 2023 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-36306046

RESUMO

Obesity is a risk factor for heart failure with preserved ejection fraction (HFpEF). We hypothesized that assessment of left atrial (LA) strain may be useful to reveal precursors of HFpEF in obesity patients. Echocardiograms of obesity patients without known cardiovascular disease who underwent bariatric surgery, and echocardiograms of age- and gender matched controls were analyzed. The echocardiogram was repeated 1 year after bariatric surgery. LA reservoir strain (LASr), LA conduit strain (LAScd), and LA contractile strain (LASct) were measured. 77 Obesity patients were compared with 46 non-obese controls. Obesity patients showed a significantly decreased LA function compared with non-obese individuals (LASr 32.2% ± 8.8% vs. 39.6% ± 10.8%, p < 0.001; LAScd 20.1% ± 7.5% vs. 24.9% ± 8.3%, p = 0.001; LASct 12.1% ± 3.6% vs. 14.5% ± 5.5%, p = 0.005). There was no difference in prevalence of diastolic dysfunction between the obesity group and controls (9.1% vs. 2.2%, p = 0.139). One year after bariatric surgery, LASr improved (32.1% ± 8.9% vs. 34.2% ± 8.7%, p = 0.048). In the multivariable linear regression analysis, BMI was associated with LASr, LAScd, and LASct (ß = - 0.34, CI - 0.54 to - 0.13; ß = - 0.22, CI - 0.38 to - 0.06; ß = - 0.10, CI - 0.20 to - 0.004). Obesity patients without known cardiovascular disease have impairment in all phases of LA function. LA dysfunction in obesity may be an early sign of cardiac disease and may be a predictor for developing HFpEF. LASr improved 1 year after bariatric surgery, indicating potential reversibility of LA function in obesity.


Assuntos
Doenças Cardiovasculares , Insuficiência Cardíaca , Humanos , Volume Sistólico , Função do Átrio Esquerdo , Valor Preditivo dos Testes , Átrios do Coração , Obesidade , Função Ventricular Esquerda
3.
Struct Dyn ; 7(5): 054303, 2020 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-32984435

RESUMO

Time-resolved optical pump/X-ray probe experiments are often used to study structural dynamics. To ensure high temporal resolution, it is necessary to monitor the timing between the X-ray pulses and the laser pulses. The transition from a crystalline solid material to a disordered state in a non-thermal melting process can be used as a reliable timing monitor. We have performed a study of the non-thermal melting of InSb in single-shot mode, where we varied the sample temperature in order to determine the conditions required for repetitive melting. We show how experimental conditions affect the feasibility of such a timing tool.

4.
Phys Rev Lett ; 124(10): 105701, 2020 Mar 13.
Artigo em Inglês | MEDLINE | ID: mdl-32216426

RESUMO

This study shows that initial atomic velocities as given by thermodynamics play an important role in the dynamics of phase transitions. We tracked the atomic motion during nonthermal laser-induced melting of InSb at different initial temperatures. The ultrafast atomic motion following bond breaking can in general be governed by two mechanisms: the random velocity of each atom at the time of bond breaking (inertial model), and the forces acting on the atoms after bond breaking. The melting dynamics was found to follow the inertial model over a wide temperature range.

5.
Struct Dyn ; 4(5): 051102, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-29085849

RESUMO

We have studied an X-ray switch based on a gold coated indium antimonide crystal using time-resolved X-ray diffraction and demonstrated that the switch could reduce the pulse duration of a 100 ps X-ray pulse down to 20 ps with a peak reflectivity of 8%. We have used a dynamical diffraction code to predict the performance of the switch, which was then confirmed experimentally. The experiment was carried out at the FemtoMAX beamline at the short-pulse facility of the MAX IV laboratory. The performance and limitation of the switch are discussed in terms of acoustic transport properties between the two materials and the electron transport properties of gold.

6.
Science ; 358(6365): 893-896, 2017 11 17.
Artigo em Inglês | MEDLINE | ID: mdl-29097491

RESUMO

Ultrafast processes in matter, such as the electron emission after light absorption, can now be studied using ultrashort light pulses of attosecond duration (10-18 seconds) in the extreme ultraviolet spectral range. The lack of spectral resolution due to the use of short light pulses has raised issues in the interpretation of the experimental results and the comparison with theoretical calculations. We determine photoionization time delays in neon atoms over a 40-electron volt energy range with an interferometric technique combining high temporal and spectral resolution. We spectrally disentangle direct ionization from ionization with shake-up, in which a second electron is left in an excited state, and obtain excellent agreement with theoretical calculations, thereby solving a puzzle raised by 7-year-old measurements.

7.
Nat Commun ; 7: 10566, 2016 Feb 18.
Artigo em Inglês | MEDLINE | ID: mdl-26887682

RESUMO

Electron dynamics induced by resonant absorption of light is of fundamental importance in nature and has been the subject of countless studies in many scientific areas. Above the ionization threshold of atomic or molecular systems, the presence of discrete states leads to autoionization, which is an interference between two quantum paths: direct ionization and excitation of the discrete state coupled to the continuum. Traditionally studied with synchrotron radiation, the probability for autoionization exhibits a universal Fano intensity profile as a function of excitation energy. However, without additional phase information, the full temporal dynamics cannot be recovered. Here we use tunable attosecond pulses combined with weak infrared radiation in an interferometric setup to measure not only the intensity but also the phase variation of the photoionization amplitude across an autoionization resonance in argon. The phase variation can be used as a fingerprint of the interactions between the discrete state and the ionization continua, indicating a new route towards monitoring electron correlations in time.

8.
Opt Lett ; 39(7): 2218-21, 2014 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-24686715

RESUMO

We study the influence of the generation conditions on the group delay of attosecond pulses in high-order harmonic generation in gases. The group delay relative to the fundamental field is found to decrease with increasing gas pressure in the generation cell, reflecting a temporal walk-off due to the dispersive properties of the nonlinear medium. This effect is well reproduced using an on-axis phase-matching model of high-order harmonic generation in an absorbing gas.

9.
Sci Rep ; 4: 4393, 2014 Mar 18.
Artigo em Inglês | MEDLINE | ID: mdl-24637665

RESUMO

The Agulhas Current (AC) is the strongest western boundary current in the Southern Hemisphere and is key for weather and climate patterns, both regionally and globally. Its heat transfer into both the midlatitude South Indian Ocean and South Atlantic is of global significance. A new composite coral record (Ifaty and Tulear massive Porites corals), is linked to historical AC sea surface temperature (SST) instrumental data, showing robust correlations. The composite coral SST data start in 1660 and comprise 200 years more than the AC instrumental record. Numerical modelling exhibits that this new coral derived SST record is representative for the wider core region of the AC. AC SSTs variabilities show distinct cooling through the Little Ice Age and warming during the late 18(th), 19th and 20th century, with significant decadal variability superimposed. Furthermore, the AC SSTs are teleconnected with the broad southern Indian and Atlantic Oceans, showing that the AC system is pivotal for inter-ocean heat exchange south of Africa.

10.
Int J Numer Method Biomed Eng ; 29(7): 777-805, 2013 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-23785013

RESUMO

We present an immersed boundary (IB) method for the simulation of steady blood flow inside a realistic cerebral aneurysm. We reconstruct a segment of the cerebrovascular system that contains an aneurysm, by using medical images obtained with three dimensional rotational angiography (3DRA). The main focus is on evaluating the sensitivity of flow predictions to the various steps of the vascular reconstruction process. Starting from the raw medical data, we analyze the fluid-mechanical consequences of the steps needed to generate the IB masking function for our simulations. We illustrate the IB method by applying it to a realistic aneurysm and investigate the role of (i) numerical resolution of the geometry; (ii) the selection of the specific vascular segment used in the simulations; and (iii) the influence of the smoothness of the periodic vessel extension to complete the computational model. Because of an unavoidable degree of uncertainty in the medical images, the geometry of the vessels and the aneurysm can be reconstructed only approximately. We also incorporate these slight uncertainties in the masking function by introducing inner and outer 'bounding' geometries and analyze the sensitivity of the flow predictions to these variations in the masking function. The numerical solutions computed in the inner and outer bounding geometries provide practical upper and lower bounds for basic flow properties, thus quantifying the reliability of the numerical solution, subject to uncertainties in the geometry of the flow domain.


Assuntos
Angiografia/métodos , Imageamento Tridimensional/métodos , Aneurisma Intracraniano/diagnóstico por imagem , Modelos Cardiovasculares , Algoritmos , Fenômenos Biomecânicos , Velocidade do Fluxo Sanguíneo , Circulação Cerebrovascular , Círculo Arterial do Cérebro/diagnóstico por imagem , Círculo Arterial do Cérebro/fisiopatologia , Simulação por Computador , Humanos , Aneurisma Intracraniano/fisiopatologia , Estresse Mecânico
11.
Sci Rep ; 3: 1410, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-23475106

RESUMO

High-order harmonic generation (HHG) in gases has been established as an important technique for the generation of coherent extreme ultraviolet (XUV) pulses at ultrashort time scales. Its main drawback, however, is the low conversion efficiency, setting limits for many applications, such as ultrafast coherent imaging, nonlinear processes in the XUV range, or seeded free electron lasers. Here we introduce a novel scheme based on using below-threshold harmonics, generated in a "seeding cell", to boost the HHG process in a "generation cell", placed further downstream in the focused laser beam. By modifying the fundamental driving field, these low-order harmonics alter the ionization step of the nonlinear HHG process. Our dual-cell scheme enhances the conversion efficiency of HHG, opening the path for the realization of robust intense attosecond XUV sources.

12.
J Hum Evol ; 57(6): 656-71, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19683789

RESUMO

Knowledge about dietary niche is key to understanding hominin evolution, since diet influences body proportions, brain size, cognition, and habitat preference. In this study we provide ecological context for the current debate on modernity (or not) of aquatic resource exploitation by hominins. We use the Homo erectus site of Trinil as a case study to investigate how research questions on possible dietary relevance of aquatic environments can be addressed. Faunal and geochemical analysis of aquatic fossils from Trinil Hauptknochenschicht (HK) fauna demonstrate that Trinil at approximately 1.5Ma contained near-coastal rivers, lakes, swamp forests, lagoons, and marshes with minor marine influence, laterally grading into grasslands. Trinil HK environments yielded at least eleven edible mollusc species and four edible fish species that could be procured with no or minimal technology. We demonstrate that, from an ecological point of view, the default assumption should be that omnivorous hominins in coastal habitats with catchable aquatic fauna could have consumed aquatic resources. The hypothesis of aquatic exploitation can be tested with taphonomic analysis of aquatic fossils associated with hominin fossils. We show that midden-like characteristics of large bivalve shell assemblages containing Pseudodon and Elongaria from Trinil HK indicate deliberate collection by a selective agent, possibly hominin.


Assuntos
Ecossistema , Hominidae/fisiologia , Animais , Aves , Dieta , Peixes , Indonésia , Mamíferos , Moluscos , Répteis , Isótopos de Estrôncio/análise
13.
Nature ; 424(6946): 299-302, 2003 Jul 17.
Artigo em Inglês | MEDLINE | ID: mdl-12867978

RESUMO

The shells of the planktonic foraminifer Neogloboquadrina pachyderma have become a classical tool for reconstructing glacial-interglacial climate conditions in the North Atlantic Ocean. Palaeoceanographers utilize its left- and right-coiling variants, which exhibit a distinctive reciprocal temperature and water mass related shift in faunal abundance both at present and in late Quaternary sediments. Recently discovered cryptic genetic diversity in planktonic foraminifers now poses significant questions for these studies. Here we report genetic evidence demonstrating that the apparent 'single species' shell-based records of right-coiling N. pachyderma used in palaeoceanographic reconstructions contain an alternation in species as environmental factors change. This is reflected in a species-dependent incremental shift in right-coiling N. pachyderma shell calcite delta18O between the Last Glacial Maximum and full Holocene conditions. Guided by the percentage dextral coiling ratio, our findings enhance the use of delta18O records of right-coiling N. pachyderma for future study. They also highlight the need to genetically investigate other important morphospecies to refine their accuracy and reliability as palaeoceanographic proxies.


Assuntos
Variação Genética/genética , Plâncton/crescimento & desenvolvimento , Plâncton/genética , Animais , Oceano Atlântico , Carbonato de Cálcio , Genótipo , Geografia , Sedimentos Geológicos , Groenlândia , Dados de Sequência Molecular , Morfogênese , Noruega , Fenótipo , Densidade Demográfica , RNA Ribossômico/genética , Especificidade da Espécie , Temperatura , Fatores de Tempo
14.
Am J Surg ; 180(3): 228-33, 2000 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-11084136

RESUMO

BACKGROUND: Plasma viral load has recently been associated with clinical outcome in patients with human immunodeficiency virus (HIV) infection and acquired immunodeficiency syndrome (AIDS). We hypothetized that, in addition to CD4 lymphocytes, plasma HIV-1 RNA counts are predictive of postoperative outcome. METHODS: HIV-infected and AIDS patients admitted to a major teaching hospital requiring invasive or surgical procedures were retrospectively analyzed for postoperative outcome. Preoperative and postoperative immune cell counts including plasma HIV-1 RNA counts were recorded. Chi-square analysis, Fisher's exact test, and multivariate regression were performed with statistical significance P

Assuntos
Infecções por HIV/complicações , HIV-1/isolamento & purificação , Complicações Pós-Operatórias/diagnóstico , RNA Viral/sangue , Procedimentos Cirúrgicos Operatórios , Carga Viral/normas , Síndrome da Imunodeficiência Adquirida/complicações , Adolescente , Adulto , Feminino , HIV-1/genética , Humanos , Masculino , Pessoa de Meia-Idade , Valor Preditivo dos Testes , Estudos Retrospectivos
15.
Nature ; 405(6782): 43-7, 2000 May 04.
Artigo em Inglês | MEDLINE | ID: mdl-10811211

RESUMO

Bipolarity, the presence of a species in the high latitudes separated by a gap in distribution across the tropics, is a well-known pattern of global species distribution. But the question of whether bipolar species have evolved independently at the poles since the establishment of the cold-water provinces 16-8 million years ago, or if genes have been transferred across the tropics since that time, has not been addressed. Here we examine genetic variation in the small subunit ribosomal RNA gene of three bipolar planktonic foraminiferal morphospecies. We identify at least one identical genotype in all three morphospecies in both the Arctic and Antarctic subpolar provinces, indicating that trans-tropical gene flow must have occurred. Our genetic analysis also reveals that foraminiferal morphospecies can consist of a complex of genetic types. Such occurrences of genetically distinct populations within one morphospecies may affect the use of planktonic foraminifers as a palaeoceanographic proxy for climate change and necessitate a reassessment of the species concept for the group.


Assuntos
Evolução Molecular , Plâncton/genética , Animais , Regiões Antárticas , Regiões Árticas , Sequência de Bases , Clima Frio , DNA Ribossômico/genética , Genética Populacional , Genótipo , Dados de Sequência Molecular , Oceanos e Mares , Filogenia , Plâncton/classificação , RNA Ribossômico/genética
16.
J Neurosci ; 19(4): 1307-16, 1999 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-9952408

RESUMO

A heterotrimeric complex containing Lin-10/X11alpha, Lin-2/CASK, and Lin-7 is evolutionarily conserved from worms to mammals. In Caenorhabditis elegans, it localizes Let-23, a receptor tyrosine kinase, to the basolateral side of vulval epithelium, a step crucial for proper vulva development. In mammals, the complex may also participate in receptor targeting in neurons. Accordingly, phosphotyrosine binding (PTB) and postsynaptic density-95/Discs large/Zona Occludens-1 domains found in X11alpha and mLin-2/CASK bind to cell-surface proteins, including amyloid precursor protein, neurexins, and syndecans. In this paper, we have further analyzed the X11alpha-mLin-2/CASK association that is mediated by a novel protein-protein interaction. We show that the mLin-2/CASK calmodulin kinase II (CKII) domain directly binds to a 63 amino acids peptide located between the Munc-18-1 binding site and the PTB domain in X11alpha. Ca2+/calmodulin association with mLin-2/CASK does not modify the X11alpha-mLin-2 interaction. A region containing the mLin-2/CASK guanylate kinase domain also interacts with X11alpha but with a lower affinity than the CKII domain. Immunostaining of X11alpha in the brain shows that the protein is expressed in areas shown previously to be positive for mLin-2/CASK staining. Together, our data demonstrate that the X11alpha-mLin-2 complex contacts many partners, creating a macrocomplex suitable for receptor targeting at the neuronal plasma membrane.


Assuntos
Proteínas Quinases Dependentes de Cálcio-Calmodulina , Proteínas do Tecido Nervoso/metabolismo , Núcleosídeo-Fosfato Quinase/metabolismo , Proteínas Adaptadoras de Transdução de Sinal , Animais , Sítios de Ligação , Química Encefálica/efeitos dos fármacos , Calmodulina/metabolismo , Linhagem Celular , DNA , Guanilato Quinases , Humanos , Imuno-Histoquímica , Masculino , Proteínas de Membrana , Fosfotirosina/metabolismo , Ratos , Ratos Sprague-Dawley , Sinapses/metabolismo
17.
J Biol Chem ; 273(48): 31633-6, 1998 Nov 27.
Artigo em Inglês | MEDLINE | ID: mdl-9822620

RESUMO

In Caenorhabditis elegans, lin-2, lin-7, and lin-10 genetically interact to control the trafficking of the Let-23 growth factor receptor to the basolateral surface of body epithelia. The human homologue of the lin-10 gene has recently been identified as a member of the X11 gene family. The X11 proteins contain one phosphotyrosine binding (PTB) and two PSD-95.Dlg.ZO-1 (PDZ) domains as well as an extended amino terminus. We have previously shown that the PTB domain of X11alpha (also known as Mint1) can bind to the amyloid precursor protein (APP) in a phosphotyrosine-independent fashion and can markedly inhibit the processing of APP to the amyloid beta (Abeta) peptide. Here, we report that X11alpha directly binds to the mammalian homologue of Lin-2 (mLin-2), also known as CASK. This binding is mediated by direct interaction between the Calmodulin Kinase II (CKII)-like domain of mLin-2 and the amino terminus of X11alpha. Furthermore, we can detect direct interactions between mLin-2 and mammalian Lin-7 (mLin-7). In mouse brain, we have identified a heterotrimeric complex that contains mLin-2, mLin-7, and X11alpha and that is likely important for the localization of proteins in polarized cells. This complex may play an important role in the trafficking and processing of APP in neurons.


Assuntos
Proteínas Adaptadoras de Transdução de Sinal , Encéfalo/metabolismo , Proteínas de Caenorhabditis elegans , Evolução Molecular , Proteínas de Helminto/genética , Proteínas de Membrana , Proteínas do Tecido Nervoso/genética , Proteínas , Sequência de Aminoácidos , Animais , Caenorhabditis elegans/genética , Caenorhabditis elegans/metabolismo , Proteína Quinase Tipo 2 Dependente de Cálcio-Calmodulina , Proteínas Quinases Dependentes de Cálcio-Calmodulina/metabolismo , Proteínas de Transporte/genética , Proteínas de Transporte/metabolismo , Linhagem Celular , Sequência Conservada , Proteínas de Helminto/metabolismo , Humanos , Camundongos , Dados de Sequência Molecular , Família Multigênica , Proteínas do Tecido Nervoso/metabolismo , Transfecção
18.
Chem Biol ; 4(12): 939-50, 1997 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-9427659

RESUMO

BACKGROUND: Erythropoietin (EPO), the hormone involved in red blood cell production, activates its receptor by binding to the receptor's extracellular domain and presumably dimerizing two receptor monomers to initiate signal transduction. EPO-mimetic peptides, such as EMP1, also bind and activate the receptor by dimerization. These mimetic peptides are not as potent as EPO, however. The crystal structure of the EPO receptor (EBP) bound to EMP1 reveals the formation of a complex consisting of two peptides bound to two receptors, so we sought to improve the biological activity of EPO-mimetic peptides by constructing covalent dimers of EMP1 and other peptide mimetics linked by polyethylene glycol (PEG). RESULTS: The potency of the PEG-dimerized EPO peptide mimetics both in vitro and in vivo was improved up to 1,000-fold compared to the corresponding peptide monomers. The dimers were constructed using peptide monomers which have only one reactive amine per molecule, allowing us to conclude that the increase in potency can be attributed to a structure in which two peptides are linked through their respective amino termini to the difunctional PEG molecule. In addition, an inactive peptide was converted into a weak agonist by PEG-induced dimerization. CONCLUSIONS: The potency of previously isolated peptides that are modest agonists of the EPO receptor was dramatically increased by PEG-induced dimerization. The EPO receptor is thought to be dimerized during activation, so our results are consistent with the proposed 2:2 receptor : peptide stoichiometry. The conversion of an inactive peptide into an agonist further supports the idea that dimerization can mediate receptor activation.


Assuntos
Eritrócitos/metabolismo , Eritropoese/fisiologia , Eritropoetina/metabolismo , Animais , Ligação Competitiva/efeitos dos fármacos , Divisão Celular/fisiologia , Cromatografia Líquida de Alta Pressão , Reagentes de Ligações Cruzadas , Membrana Eritrocítica/metabolismo , Eritropoetina/isolamento & purificação , Espaço Extracelular/metabolismo , Humanos , Técnicas In Vitro , Radioisótopos de Ferro , Espectrometria de Massas , Camundongos , Peso Molecular , Policitemia/sangue , Polietilenoglicóis/metabolismo , Receptores da Eritropoetina/agonistas , Receptores da Eritropoetina/biossíntese , Proteínas Recombinantes
19.
J Mol Evol ; 43(6): 672-7, 1996 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-8995064

RESUMO

Phylogenetic analysis of five partial planktic foraminiferal small subunit (SSU) ribosomal (r) DNA sequences with representatives of a diverse range of eukaryote, archaebacterial, and eubacterial taxa has revealed that the evolutionary origin of the foraminiferal lineage precedes the rapid eukaryote diversification represented by the "crown" of the eukaryotic tree and probably represents one of the earliest splits among extant free-living aerobic eukaryotes. The foraminiferal rDNA sequences could be clearly separated from known symbionts, commensals, and food organisms. All five species formed a single monophyletic group distinguished from the "crown" group by unique foraminiferal specific insertions as well as considerable nucleotide distance in aligned regions.


Assuntos
Evolução Biológica , DNA Ribossômico/genética , Eucariotos/genética , Filogenia , Plâncton/fisiologia , Animais , Primers do DNA , DNA de Protozoário/genética , Diplomonadida/classificação , Diplomonadida/fisiologia , Eucariotos/classificação , Eucariotos/fisiologia , Células Eucarióticas , Kinetoplastida/classificação , Kinetoplastida/fisiologia , Modelos Biológicos , Plâncton/classificação , Reação em Cadeia da Polimerase/métodos , Homologia de Sequência do Ácido Nucleico
20.
Protein Expr Purif ; 7(1): 104-13, 1996 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-9172774

RESUMO

The extracellular domain of the human erythropoietin receptor (EPO binding protein (EBP)) has been expressed and overproduced in Escherichia coli. Regardless of the presence ofpelB or ompT signal sequences the recombinant protein produced in this fashion appears, as with many other recombinant eukaryotic proteins produced in E. coli as an insoluble product in laboratory scale fermentations. The induction product of the pelB protein expression system appears as two protein forms with slightly different molecular weights. Based on N-terminal sequence analysis of recovered protein, these forms represent two variants, one with the signal sequence properly processed to yield the expected "native" amino terminus and another which retains the signal sequence. Both forms appear as insoluble fermentation products. Control of oxygen levels and pH during high density fermentation allows the production of only the protein variant with the native amino terminus. Methods reported here permit the efficient recovery of purified EBP which quantitatively binds EPO in solution as determined by high performance size exclusion chromatography. A long-lived refolding intermediate was observed which penultimately collapses into an active conformation. The active purified protein competes with membrane associated EPO receptor for binding [125I]EPO and neutralizes EPO-dependent stimulation in a cell based proliferation assay. Further, the radioligand equilibrium binding constant for this interaction has been determined by immobilizing EBP on agarose gel via a free cysteine. The production of EBP by these methods should facilitate the structural determination of the protein by NMR or crystallography and may serve as a guide for the refolding of other hematopoietic receptors.


Assuntos
Eritropoetina/metabolismo , Receptores da Eritropoetina/química , Receptores da Eritropoetina/isolamento & purificação , Sequência de Aminoácidos , Ligação Competitiva , Cromatografia Líquida de Alta Pressão , Eletroforese em Gel de Poliacrilamida , Escherichia coli/genética , Expressão Gênica , Vetores Genéticos , Humanos , Espectrometria de Massas , Dados de Sequência Molecular , Fragmentos de Peptídeos/química , Ligação Proteica , Conformação Proteica , Dobramento de Proteína , Receptores da Eritropoetina/genética , Receptores da Eritropoetina/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Solubilidade
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