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1.
Zhonghua Yan Ke Za Zhi ; 58(2): 120-129, 2022 Feb 11.
Artigo em Chinês | MEDLINE | ID: mdl-35144352

RESUMO

Objective: To establish a method to record the spontaneous blink pattern with a machine learning model, and to clarify the spontaneous blink pattern in patients with dry eye. Methods: It was a cross-setional study.We selected 357 dry eye patients (102 males and 255 females), aged (46.2±13.3) years, who visited corneal specialist clinics of Beijing Tongren Eye Center in 2019, as the dry eye group. The control group enrolled 152 normal controls, including 32 males and 120 females, aged (48.1±13.9) years. All participants completed the Ocular Surface Disease Index questionnaire, blink video capture, lipid layer thickness measurement, tear break-up time measurement, corneal fluorescein staining, and Schirmer Ⅱ test. Based on the assembled model built using UNet image segmentation algorithm and ResNet image classification algorithm, single frames of the blink video were analyzed, and then the palpebral opening height of each frame was obtained in order to establish a spontaneous blink wave. Finally, the characteristics of spontaneous blinks in dry eye patients were analyzed based on different types of complete blinks (types A, B and C) and partial blinks (types Ⅰ, Ⅱ and Ⅲ). Independent sample t test and Wilcoxon rank-sum test were used to judge if there was significant difference between the dry eye group and the normal group. Results: The accuracy of the segmentation model and the classification model was 96.3% and 96.0%, respectively, and the consistency with the manual analysis was 97.9%. In dry eye patients, the number of blinks was 30 (18, 42)/min, which was higher than that in normal controls [20 (9, 46)/min] (U=18 132.50, P=0.002). The number of complete blinks in dry eye cases was significantly lower than that in normal controls [6 (3, 24)/min vs. 12 (3,33)/min; U=12 361.00, P=0.016], and the number of partial blinks was significantly higher than that in normal controls [15 (6, 27)/min vs. 3 (0, 10)/min; U=22 839.00, P<0.001]. In complete blinks, the proportion of type A blinks in dry eye patients was significantly higher than that in normal controls [53.7% (2 796/5 177) vs. 39.3% (633/1 698); χ²=101.83, P<0.001]; in partial blinks, the proportion of type Ⅱ blinks in dry eye patients was significantly higher than that in normal controls [36.0%(2 334/6 477) vs. 29.6%(126/426); χ²=6.99, P=0.007]. The average interblink interval of dry eye patients was 1.2 s, which was not significantly different from that of normal controls (1.1 s; U=15 230.00, P=0.093). The eyelid closed phase of dry eye patients was 0.8 s, which was significantly shorter than that of normal controls (1.3 s; U=16 291.50, P=0.006). There were no significant differences in eyelid closing phase, early opening phase and late opening phase between the two groups (all P>0.05). Conclusions: In dry eye patients, the number of partial blinks increased, the number of complete blinks decreased, and the duration of eyelid closed phase shortened significantly. The main blink patterns of dry eye patients included type Ⅱ partial blinks with a reduced closure amplitude and type A complete blinks with a shortened closure time.


Assuntos
Piscadela , Síndromes do Olho Seco , Adulto , Pálpebras , Feminino , Humanos , Aprendizado de Máquina , Masculino , Pessoa de Meia-Idade , Lágrimas
2.
Toxicol Lett ; 340: 52-57, 2021 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-33421553

RESUMO

The BCOP assay is used in the identification of chemicals that cause no ocular irritation or serious damage. However, this method has not been found to adequately discriminate between mild from moderate ocular irritation (category 2A/2B), based upon the animal data. In this study, we aimed to establish methods for discerning ocular irritation by chemicals. We used the BCOP assay and the fluorescence staining methods based on biomarkers for cellular viability and death. The potential for ocular irritation by 12 chemicals from different UN GHS categories was assessed by the BCOP assay. Cryosections of bovine corneas were obtained. The necrotic nucleus was TUNEL labeled, cytoplasmic f-actin was stained by phalloidin while the nucleus was stained by DAPI. The depth of injury (DOI) was then measured. According to BCOP assay, in vivo data of Draize eye test and DOI, the results showed that category NC irritants caused ≤ 10 % epithelial DOI, irritants of category 2B caused >10 % epithelial DOI and showed no stromal damage, while category 2A showed damage to the stroma. Based on these results, the GHS prediction model could distinguish between GHS 2A and 2B. Authenticating the viability of BCOP by DOI measurements can provide a more reliable basis for classifying ocular irritants.


Assuntos
Bovinos , Sobrevivência Celular/efeitos dos fármacos , Córnea/efeitos dos fármacos , Opacidade da Córnea/induzido quimicamente , Irritantes/toxicidade , Alternativas aos Testes com Animais/métodos , Animais , Bioensaio/métodos , Biomarcadores/metabolismo
3.
Genes Immun ; 18(3): 127-134, 2017 09.
Artigo em Inglês | MEDLINE | ID: mdl-28569259

RESUMO

The killer cell immunoglobulin-like receptor (KIR) region of human chromosome 19 contains up to 16 genes for natural killer (NK) cell receptors that recognize human leukocyte antigen (HLA)/peptide complexes and other ligands. The KIR proteins fulfill functional roles in infections, pregnancy, autoimmune diseases and transplantation. However, their characterization remains a constant challenge. Not only are the genes highly homologous due to their recent evolution by tandem duplications, but the region is structurally dynamic due to frequent transposon-mediated recombination. A sequencing approach that precisely captures the complexity of KIR haplotypes for functional annotation is desirable. We present a unique approach to haplotype the KIR loci using single-molecule, real-time (SMRT) sequencing. Using this method, we have-for the first time-comprehensively sequenced and phased sixteen KIR haplotypes from eight individuals without imputation. The information revealed four novel haplotype structures, a novel gene-fusion allele, novel and confirmed insertion/deletion events, a homozygous individual, and overall diversity for the structural haplotypes and their alleles. These KIR haplotypes augment our existing knowledge by providing high-quality references, evolutionary informers, and source material for imputation. The haplotype sequences and gene annotations provide alternative loci for the KIR region in the human genome reference GrCh38.p8.


Assuntos
Haplótipos , Receptores KIR/genética , Sequenciamento Completo do Genoma/métodos , Cromossomos Humanos Par 19/genética , Humanos
4.
Oncogene ; 36(26): 3749-3759, 2017 06 29.
Artigo em Inglês | MEDLINE | ID: mdl-28218903

RESUMO

Anti-angiogenic therapies for cancer such as VEGF neutralizing antibody bevacizumab have limited durability. While mechanisms of resistance remain undefined, it is likely that acquired resistance to anti-angiogenic therapy will involve alterations of the tumor microenvironment. We confirmed increased tumor-associated macrophages in bevacizumab-resistant glioblastoma patient specimens and two novel glioblastoma xenograft models of bevacizumab resistance. Microarray analysis suggested downregulated macrophage migration inhibitory factor (MIF) to be the most pertinent mediator of increased macrophages. Bevacizumab-resistant patient glioblastomas and both novel xenograft models of resistance had less MIF than bevacizumab-naive tumors, and harbored more M2/protumoral macrophages that specifically localized to the tumor edge. Xenografts expressing MIF-shRNA grew more rapidly with greater angiogenesis and had macrophages localizing to the tumor edge which were more prevalent and proliferative, and displayed M2 polarization, whereas bevacizumab-resistant xenografts transduced to upregulate MIF exhibited the opposite changes. Bone marrow-derived macrophage were polarized to an M2 phenotype in the presence of condition-media derived from bevacizumab-resistant xenograft-derived cells, while recombinant MIF drove M1 polarization. Media from macrophages exposed to bevacizumab-resistant tumor cell conditioned media increased glioma cell proliferation compared with media from macrophages exposed to bevacizumab-responsive tumor cell media, suggesting that macrophage polarization in bevacizumab-resistant xenografts is the source of their aggressive biology and results from a secreted factor. Two mechanisms of bevacizumab-induced MIF reduction were identified: (1) bevacizumab bound MIF and blocked MIF-induced M1 polarization of macrophages; and (2) VEGF increased glioma MIF production in a VEGFR2-dependent manner, suggesting that bevacizumab-induced VEGF depletion would downregulate MIF. Site-directed biopsies revealed enriched MIF and VEGF at the enhancing edge in bevacizumab-naive patients. This MIF enrichment was lost in bevacizumab-resistant glioblastomas, driving a tumor edge M1-to-M2 transition. Thus, bevacizumab resistance is driven by reduced MIF at the tumor edge causing proliferative expansion of M2 macrophages, which in turn promotes tumor growth.


Assuntos
Inibidores da Angiogênese/farmacologia , Neoplasias Encefálicas/irrigação sanguínea , Neoplasias Encefálicas/tratamento farmacológico , Glioblastoma/irrigação sanguínea , Glioblastoma/tratamento farmacológico , Fatores Inibidores da Migração de Macrófagos/metabolismo , Animais , Bevacizumab/farmacologia , Neoplasias Encefálicas/metabolismo , Linhagem Celular Tumoral , Proliferação de Células/efeitos dos fármacos , Regulação para Baixo , Resistencia a Medicamentos Antineoplásicos , Feminino , Glioblastoma/metabolismo , Humanos , Macrófagos , Camundongos , Camundongos Endogâmicos BALB C , Camundongos Nus , Neovascularização Patológica/tratamento farmacológico , Neovascularização Patológica/metabolismo , Ensaios Antitumorais Modelo de Xenoenxerto
5.
Genet Mol Res ; 15(4)2016 Oct 17.
Artigo em Inglês | MEDLINE | ID: mdl-27813563

RESUMO

Fusarium wilt (also known as Panama disease) is one of the most destructive banana diseases, and greatly hampers the global production of bananas. Consequently, it has been very detrimental to the Chinese banana industry. An infected plant is one of the major causes of the spread of Fusarium wilt to nearby regions. It is essential to develop an efficient and environmentally sustainable disease control method to restrict the spread of Fusarium wilt. We isolated Trichoderma spp from the rhizosphere soil, roots, and pseudostems of banana plants that showed Fusarium wilt symptoms in the infected areas. Their cellulase activities were measured by endoglucanase activity, ß-glucosidase activity, and filter paper activity assays. Safety analyses of the Trichoderma isolates were conducted by inoculating them into banana plantlets. The antagonistic effects of the Trichoderma spp on the Fusarium pathogen Foc tropical Race 4 (Foc TR4) were tested by the dual culture technique. Four isolates that had high cellulase activity, no observable pathogenicity to banana plants, and high antagonistic capability were identified. The isolates were used to biodegrade diseased banana plants infected with GFP-tagged Foc TR4, and the compost was tested for biological control of the infectious agent; the results showed that the fermentation suppressed the incidence of wilt and killed the pathogen. This study indicates that Trichoderma isolates have the potential to eliminate the transmission of Foc TR4, and may be developed into an environmentally sustainable treatment for controlling Fusarium wilt in banana plants.


Assuntos
Fermentação , Fusarium/fisiologia , Musa/microbiologia , Doenças das Plantas/microbiologia , Trichoderma/fisiologia , Bioensaio , Proteínas de Fluorescência Verde/metabolismo , Filogenia , Folhas de Planta/microbiologia , Caules de Planta/microbiologia , Trichoderma/isolamento & purificação
6.
Plant Dis ; 95(10): 1319, 2011 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-30731666

RESUMO

Cherry green ring mottle virus (CGRMV; a member of the genus Foveavirus in the family Flexiviridae) has a single-stranded, positive-sense RNA genome of approximately 8.4 kb (4). The viral infection on several Prunus spp. has been mainly reported in Japan, New Zealand, and some countries in Africa, Europe, and North America (3). The virus can cause leaf yellowing on sour and tart cherry. Sweet cherry plants are symptomless hosts of the virus. During the growing season of 2010, leaf samples were collected randomly from one ornamental cherry (Prunus serrulata L.) and 26 sweet cherry (P. avium (L.) L.) plants grown in Shangdong and Henan provinces in northern China and 64 peach (P. persica L. Batsch) plants grown in Hubei Province in central China and tested for the presence of CGRMV by reverse transcription (RT)-PCR. Total RNA was extracted from leaves using the CTAB protocol reported by Li et al (2). Primer set, CGRMV1/CGRMV2 (1), was used for the amplification of a 949-bp fragment, which contains the complete CP gene of 807 bp. PCR products with the expected size were identified in one ornamental cherry, seven sweet cherry, and eight peach plants. Although some of sampled plants showed leaf chlorosis, we did not find the specific association between the symptom and CGRMV infection. The obtained PCR products were cloned into the vector pMD18-T (TaKaRa, Dalian, China). Three independent clones from each isolate were sequenced by Genscript Corp., Nanjing, China. Results showed that CP sequences from the Chinese CGRMV isolates shared 87.7 to 99.8% nucleotide and 93.3 to 100% deduced amino acid similarities, and clones intra each isolate shared more than 99% nt similarities. The CP gene sequences of two representative isolates from cherry (YT-Ch-1) and peach (Pe-HB-18) were submitted to GenBank with Accession Nos. HQ539656 and JF810672, respectively. The neighbor-joining phylogenetic trees generated with nucleotide and amino acid sequences of CP genes by Clustal X v1.8 revealed that all Chinese CGRMV isolates fell into two well-resolved clades. Most of the Chinese CGRMV isolates (12 of 16 isolates, including the isolate YT-Ch-1) were grouped in a large clade represented by isolate ITA5 (GenBank Accession No. AF533159). Four isolates from peach (including the isolate Pe-HB-18) clustered into another clade represented by isolate ITA6 (GenBank Accession No. AF533160). In July 2010, peach GF305 seedlings were inoculated by side grafting with budwoods from two CGRMV positive cherry plants. In May 2011, some newly developed leaves from all inoculated plants showed vein yellowing. The CGRMV infection in these inoculated peach GF305 plants was detected by RT-PCR and protein A sandwich-ELISA using antiserum raised against the recombinant CP of CGRMV isolate YT-Ch-1 (unpublished data). These results further confirmed the CGRMV infection on field cherry plants as detected by RT-PCR. To our knowledge, this is the first record of the presence of CGRMV in ornamental and sweet cherry and peach plants in China, which provides valuable information for further evaluating the sanitary status of the virus in sweet cherry and peach orchards in China. References: (1) R. Li and R. Mock. J. Virol. Methods 129:162, 2005. (2) R. Li et al. J. Virol. Methods 154:48, 2008. (3) K. G. Parker et al. USDA. Agric. Handb. No. 437:193, 1976. (4) Y. Zhang et al. J. Gen. Virol. 79:2275, 1998.

7.
Eur J Med Chem ; 41(4): 558-65, 2006 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-16545498

RESUMO

Action mechanisms of four types of PI3Kgamma inhibitors were investigated on the ligand-binding pocket (LBP) of PI3Kgamma with molecular modeling method. At first five compounds whose complex structures with PI3Kgamma were available experimentally were used to validate the reliability of docking program Autodock3.0. The results demonstrated that the program could reproduce the bound conformations of those compounds in crystal structures. Then the program was used to dock all the four types of PI3Kgamma inhibitors into the LBP of the enzyme. The predicted activities of these compounds were in agreement with their experimental activities, and a pharmacophore model was hence derived for these compounds, which consisted of one hydrophobic portion flanked by two symmetric hydrophilic portions. Furthermore, the structure-activity relationships of PI3Kgamma inhibitors were elucidated and the activity differences between them were discussed.


Assuntos
Inibidores Enzimáticos/química , Inibidores Enzimáticos/farmacologia , Inibidores de Fosfoinositídeo-3 Quinase , Trifosfato de Adenosina/metabolismo , Algoritmos , Sítios de Ligação/efeitos dos fármacos , Classe Ib de Fosfatidilinositol 3-Quinase , Cristalografia por Raios X , Isoenzimas/antagonistas & inibidores , Ligantes , Modelos Moleculares , Relação Estrutura-Atividade
8.
Bioorg Med Chem ; 9(6): 1543-8, 2001 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-11408173

RESUMO

A challenge associated with drug design is the development of selective inhibitors of proteases (serine or cysteine) that exhibit the same primary substrate specificity, that is, show a preference for the same P(1) residue. While these proteases have similar active sites, nevertheless there are subtle differences in their S and S' subsites which can be exploited. We describe herein for the first time the use of functionalized sulfonamides as a design and diversity element which, when coupled to the 1,2,5-thiadiazolidin-3-one 1,1 dioxide scaffold yields potent, time-dependent inhibitors of the serine proteases human leukocyte elastase (HLE), proteinase 3 (PR 3) and cathepsin G(Cat G). Our preliminary findings suggest that (a) appending to the 1,2,5-thiadiazolidin-3-one 1,1 dioxide scaffold recognition and diversity elements that interact with both the S and S' subsites of a target protease may result in optimal enzyme selectivity and potency and, (b) functionalized sulfonamides constitute a powerful design and diversity element with low intrinsic chemical reactivity and potentially wide applicability.


Assuntos
Óxidos S-Cíclicos/química , Desenho de Fármacos , Inibidores de Serina Proteinase/química , Inibidores de Serina Proteinase/farmacologia , Sulfonamidas/química , Tiazóis/química , Catepsina G , Catepsinas/antagonistas & inibidores , Elastase de Leucócito/antagonistas & inibidores , Modelos Moleculares , Mieloblastina , Serina Endopeptidases/efeitos dos fármacos , Relação Estrutura-Atividade
9.
Arch Biochem Biophys ; 385(1): 162-9, 2001 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-11361013

RESUMO

The 1,2,5-thiadiazolidin-3-one 1,1 dioxide scaffold (I) embodies a motif that allows it to dock to the active site of (chymo)trypsin-like proteases in a predictable and substrate-like fashion. Consequently, inhibitors derived from this heterocyclic scaffold interact with both the S and S' subsites of an enzyme. Exploitation of binding interactions with both the S and S' subsites of a target enzyme may lead to compounds with greatly enhanced enzyme selectivity and inhibitory potency. This preliminary report describes the use of a series of compounds having the heterocyclic scaffold linked to various amino acids to probe the S' subsites of human leukocyte elastase (HLE), proteinase 3 (PR 3), and cathepsin G (Cat G). For comparative purposes, a series of compounds derived from a related scaffold, isothiazolidin-3-one 1,1 dioxide (II), was also generated. Several of the compounds were found to be highly potent and selective time-dependent inhibitors of HLE, PR 3, and Cat G.


Assuntos
Quimotripsina/química , Óxidos S-Cíclicos/química , Sondas Moleculares/química , Serina Endopeptidases/química , Tiazóis/química , Catepsina G , Catepsinas/química , Catepsinas/metabolismo , Humanos , Cinética , Elastase de Leucócito/química , Elastase de Leucócito/metabolismo , Modelos Químicos , Mieloblastina , Ligação Proteica , Serina Endopeptidases/metabolismo , Temperatura , Fatores de Tempo
10.
Int J Food Microbiol ; 65(1-2): 125-30, 2001 Apr 11.
Artigo em Inglês | MEDLINE | ID: mdl-11322695

RESUMO

The antibacterial activity of dimethyl fumarate (DMF) and six other compounds against Escherichia coli (E. coli, K12) was investigated in culture media and compared. DMF was found to be more efficient than any other compound at the concentration of 200 ppm. The inhibitory activity of DMF against E. coli increased with increasing concentration of DMF. DMF also exhibited more obvious inhibition against E. coli at the initial growth phase than at other phases. The antibacterial ability of DMF showed low stability to heat processing but was less sensitive to pH values. Under conditions of restricted availability of oxygen, E. coli was more sensitive to DMF. The results indicate that DMF may be a potentially effective alternative antimicrobial agent to inhibit E. coli.


Assuntos
Antibacterianos/farmacologia , Escherichia coli/crescimento & desenvolvimento , Fumaratos/farmacologia , Fumarato de Dimetilo , Escherichia coli/efeitos dos fármacos , Concentração de Íons de Hidrogênio , Testes de Sensibilidade Microbiana , Oxigênio , Temperatura , Fatores de Tempo
11.
Bioorg Med Chem ; 8(7): 1713-7, 2000 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-10976518

RESUMO

The existence of subtle differences in the Sn' subsites of closely-related (chymo)trypsin-like serine proteases, and the fact that the 1,2,5-thiadiazolidin-3-one 1,1 dioxide scaffold docks to the active site of (chymo)trypsin-like enzymes in a substrate-like fashion, suggested that the introduction of recognition elements that can potentially interact with the Sn' subsites of these proteases might provide an effective means for optimizing enzyme potency and selectivity. Accordingly, a series of heterocyclic sulfide derivatives based on the 1,2,5-thiadiazolidin-3-one 1,1 dioxide scaffold (I) was synthesized and the inhibitory activity and selectivity of these compounds toward human leukocyte elastase (HLE), proteinase 3 (PR 3) and cathepsin G (Cat G) were then determined. Compounds with P1 = isobutyl were found to be potent, time-dependent inhibitors of HLE and, to a lesser extent PR 3, while those with P1 = benzyl inactivated Cat G rapidly and irreversibly. This study has demonstrated that 1,2,5-thiadiazolidin-3-one 1,1 dioxide-based heterocyclic sulfides are effective inhibitors of (chymo)trypsin-like serine proteases.


Assuntos
Óxidos S-Cíclicos/farmacologia , Compostos Heterocíclicos/farmacologia , Inibidores de Serina Proteinase/fisiologia , Sulfetos/farmacologia , Tiadiazóis/farmacologia , Catepsina G , Catepsinas/antagonistas & inibidores , Catepsinas/efeitos dos fármacos , Relação Dose-Resposta a Droga , Inibidores Enzimáticos/síntese química , Inibidores Enzimáticos/farmacologia , Humanos , Cinética , Elastase de Leucócito/antagonistas & inibidores , Elastase de Leucócito/efeitos dos fármacos , Modelos Moleculares , Mimetismo Molecular , Mieloblastina , Serina Endopeptidases/efeitos dos fármacos , Serina Endopeptidases/metabolismo , Relação Estrutura-Atividade , Tiadiazóis/síntese química , Fatores de Tempo
12.
Yi Chuan Xue Bao ; 27(2): 114-20, 2000.
Artigo em Chinês | MEDLINE | ID: mdl-10887677

RESUMO

By using three strains with different number of B chromosome (1-2Bs, 0B, > 2Bs) on the same genetic background, the effect of B chromosome on the reproduction of Drosophila albomicans was studied. Comparison of net reproduction and sex ratio among three strains showed that Bs has significantly effect on flies' net reproduction. The net reproduction of flies with 1-2Bs, 0B, > 2Bs is 196, 157, 147, respectively. Significant difference among three strains exists in the early stage of reproduction. The sex ratios of three strains are all close to 1:1, no significant difference was observed. The results indicated that lower dose of Bs enhances the flies' reproduction and fitness, while higher dose of Bs slightly reduces flies reproduction and fitness. These results lend the first strong support to the heterotic model.


Assuntos
Cromossomos , Drosophila/genética , Drosophila/fisiologia , Animais , Feminino , Masculino , Reprodução
13.
Bioorg Med Chem ; 8(5): 1005-16, 2000 May.
Artigo em Inglês | MEDLINE | ID: mdl-10882012

RESUMO

A series of carboxylate derivatives based on the 1,2,5-thiadiazolidin-3-one 1,1 dioxide and isothiazolidin-3-one 1,1 dioxide scaffolds has been synthesized and the inhibitory profile of these compounds toward human leukocyte elastase (HLE), cathepsin G (Cat G) and proteinase 3 (PR 3) was then determined. Most of the compounds were found to be potent, time-dependent inhibitors of elastase, with some of the compounds exhibiting k(inact)/K1 values as high as 4,928,300 M(-1) s(-1). The inhibitory potency of carboxylate derivatives based on the 1,2,5-thiadiazolidin-3-one 1,1 dioxide platform was found to be influenced by both the pKa and the inherent structure of the leaving group. Proper selection of the primary specificity group (R(I)) was found to lead to selective inhibition of HLE over Cat G, however, those compounds that inhibited HLE also inhibited PR 3, albeit less efficiently. The predictable mode of binding of these compounds suggests that, among closely-related serine proteases, highly selective inhibitors of a particular serine protease can be fashioned by exploiting subtle differences in their S' subsites. This study has also demonstrated that the degradative action of elastase on elastin can be abrogated in the presence of inhibitor 17.


Assuntos
Óxidos S-Cíclicos/química , Inibidores de Serina Proteinase/química , Tiadiazóis/química , Desenho de Fármacos , Elastina/metabolismo , Humanos , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Inibidores de Serina Proteinase/metabolismo , Inibidores de Serina Proteinase/farmacologia , Relação Estrutura-Atividade
14.
Ann N Y Acad Sci ; 884: 270-91, 1999 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-10842600

RESUMO

Sensorineural hearing loss results from the degeneration of hair cells and/or auditory neurons in the cochlea of the inner ear. BDNF and NT-3 were shown to support survival of auditory neurons both in vitro and in vivo. Cochlea from P3-P4 rats were cultured as floating explants and hair cells in the organ of Corti were identified by phalloidin-FITC immunostaining. Treatment with cisplatin (35 micrograms/mL) or neomycin (0.6 mM) resulted in 21.2 +/- 6.0% and 7.4 +/- 4.7% surviving hair cells, respectively, after 3 days in culture. GDNF, added together with the ototoxins, increased their number to 46.7% and 37.4%, respectively. In cultures of dissociated cochlea from 4-week-old rat, cisplatin (5 mg/mL) added 24 h after seeding resulted in only 6.1 +/- 1.2% surviving neurons. However, when cisplatin was added together with GDNF (10 ng/mL), 32.8 +/- 1.0% of the neurons survived. The efficacy of GDNF in animal models of ototoxicity was tested next. Guinea pigs were pretreated with GDNF in one ear, delivered either by infusion into the inner ear (scala tympani) with Alzet minipumps (50 ng/mL at a 0.5 microL/h), or injected into the middle ear (120 microL at 1 mg/mL) through the tympanic membrane. The ear that did not receive GDNF always served as control. Ototoxicity was induced systemically either by intraperitoneal cisplatin injections (1 mg/kg/day for 15 days or two injections of 7.5 mg/kg at a 5-day interval or by a combination of kanamycin (200-300 mg/kg, administered subcutaneously) and ethacrinic acid (40 mg/kg, intravenous). It was found that the number of surviving hair cells in GDNF-treated ears was about twice that of control ears in animals exposed to the ototoxins. The transducing GDNF receptor (ret) is expressed in the inner ear.


Assuntos
Células Ciliadas Auditivas Externas/efeitos dos fármacos , Fatores de Crescimento Neural , Proteínas do Tecido Nervoso/farmacologia , Fármacos Neuroprotetores/farmacologia , Rampa do Tímpano/efeitos dos fármacos , Animais , Antibacterianos/efeitos adversos , Antineoplásicos/efeitos adversos , Células Cultivadas , Cisplatino/efeitos adversos , Inibidores Enzimáticos/efeitos adversos , Ácido Etacrínico/efeitos adversos , Fator Neurotrófico Derivado de Linhagem de Célula Glial , Cobaias , Humanos , Canamicina/efeitos adversos , Ratos , Ratos Long-Evans , Ratos Wistar
15.
Bioorg Med Chem ; 6(6): 661-71, 1998 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-9681132

RESUMO

This paper describes the results of structure-activity relationship studies in a series of heterocyclic mechanism-based inhibitors based on the 1,2,5-thiadiazolidin-3-one 1,1 dioxide scaffold I and capable of interacting with the Sn and Sn' subsites of a serine proteinase. Sulfone derivatives of I were found to be highly effective, time-dependent inhibitors of human leukocyte elastase (HLE), cathepsin G (Cat G) and proteinase 3 (PR 3). The judicious selection of an R1 group (accommodated at the primary specificity site S1) that is based on the known substrate specificity of a target serine proteinase, was found to yield highly selective inhibitors. The presence of a benzyl group (R2 = benzyl) at the S2 subsite was found to lead to a pronounced enhancement in inhibitory potency. Furthermore, the effective use of computer graphics and modeling has led to the design of potent, water-soluble inhibitors. The results of these studies demonstrate that the 1,2,5-thiadiazolidin-3-one 1,1, dioxide platform provides an effective means for appending recognition elements in a well-defined vector relationship, and in fashioning highly-selective and potent inhibitors of serine proteinases.


Assuntos
Catepsinas/antagonistas & inibidores , Elastase de Leucócito/antagonistas & inibidores , Serina Endopeptidases/metabolismo , Inibidores de Serina Proteinase/farmacologia , Tiadiazóis/farmacologia , Catepsina G , Humanos , Cinética , Modelos Moleculares , Mieloblastina , Inibidores de Serina Proteinase/síntese química , Inibidores de Serina Proteinase/química , Relação Estrutura-Atividade , Tiadiazóis/síntese química , Tiadiazóis/química
16.
Bioorg Med Chem Lett ; 8(5): 539-44, 1998 Mar 03.
Artigo em Inglês | MEDLINE | ID: mdl-9871614

RESUMO

The attachment of a phosphate leaving group to the 1,2,5-thiadiazolidin-3-one 1,1 dioxide and isothiazolidin-3-one 1,1 dioxide scaffolds was found to yield highly potent, time-dependent inhibitors of human leukocyte elastase (HLE).


Assuntos
Desenho de Fármacos , Inibidores de Serina Proteinase/síntese química , Tiadiazóis/química , Sítios de Ligação , Humanos , Cinética , Elastase de Leucócito/antagonistas & inibidores , Elastase de Leucócito/química , Modelos Moleculares , Inibidores de Serina Proteinase/química
17.
Biochem Biophys Res Commun ; 233(3): 697-9, 1997 Apr 28.
Artigo em Inglês | MEDLINE | ID: mdl-9168917

RESUMO

The interaction of a bioengineered serpin (LEX032) with human leukocyte proteinase 3 (PR 3) has been investigated. LEX032 was found to be a time-dependent inhibitor of PR 3, forming a highly-stable enzyme-inhibitor complex (Ki 12 nM).


Assuntos
Leucócitos/enzimologia , Serina Endopeptidases/metabolismo , Inibidores de Serina Proteinase/farmacologia , Serpinas/farmacologia , Sequência de Aminoácidos , Sítios de Ligação/genética , Humanos , Técnicas In Vitro , Cinética , Mieloblastina , Proteínas Recombinantes/genética , Proteínas Recombinantes/farmacologia , Inibidores de Serina Proteinase/genética , Serpinas/genética
18.
Biochemistry ; 36(16): 4739-50, 1997 Apr 22.
Artigo em Inglês | MEDLINE | ID: mdl-9125494

RESUMO

We describe in this paper the structure-based design of a general class of heterocyclic mechanism-based inhibitors of the serine proteinases that embody in their structure a novel peptidomimetic scaffold (1,2,5-thiadiazolidin-3-one 1,1-dioxide). Sulfone derivatives of this class (I) were found to be time-dependent, potent, and highly efficient irreversible inhibitors of human leukocyte elastase, cathepsin G, and proteinase 3. The partition ratios for a select number of inhibitors were found to range between 0 and 1. We furthermore demonstrate that these inhibitors exhibit remarkable enzyme selectivity that is dictated by the nature of the P1 residue and is consistent with the known substrate specificity reported for these enzymes. Thus, inhibitors with small hydrophobic side chains were found to be effective inhibitors of elastase, those with aromatic side chains of cathepsin G, and those with a basic side chain of bovine trypsin. Taken together, the findings cited herein reveal the emergence of a general class of stable mechanism-based inhibitors of the serine proteinases which can be readily synthesized using amino acid precursors. Biochemical and high-field NMR studies show that the interaction of this class of inhibitors with a serine proteinase results in the formation of a stable acyl complex(es) and the release of benzenesulfinate, formaldehyde, and a low molecular weight heterocycle. The data are consistent with initial formation of a Michaelis-Menten complex, acylation of Ser195, and tandem loss of the leaving group. The initial HLE-inhibitor complex reacts with water generating formaldehyde and a stable HLE-inhibitor complex. Whether the initial HLE-inhibitor complex also reacts with His57 to form a third complex is not known at this point. The desirable salient parameters associated with this class of inhibitors, including the expeditious generation of structurally diverse libraries of inhibitors based on I, suggest that this class of mechanism-based inhibitors is of general applicability and can be used in the development of inhibitors of human and viral serine proteinases of clinical relevance.


Assuntos
Desenho de Fármacos , Compostos Heterocíclicos/química , Inibidores de Serina Proteinase/síntese química , Aminoácidos , Autoantígenos/metabolismo , Catepsina G , Catepsinas/antagonistas & inibidores , Humanos , Elastase de Leucócito/antagonistas & inibidores , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Mieloblastina , Serina Endopeptidases/metabolismo , Relação Estrutura-Atividade
19.
Bioorg Med Chem ; 4(9): 1393-400, 1996 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-8894097

RESUMO

The inhibitory activity toward human leukocyte elastase (HLE), cathepsin G (Cat G), and proteinase 3 (PR 3) of a series of saccharin derivatives having a sulfinate leaving group was investigated. The results of this study revealed that (a) inhibitory activity is dependent on the nature and pKa of the leaving group, and (b) the synthesized saccharin derivatives exhibit selective inhibition toward HLE and PR 3, with low or no activity toward cathepsin G. The results of exploratory biochemical, HPLC and high-field 13C NMR studies are also described.


Assuntos
Catepsinas/antagonistas & inibidores , Elastase de Leucócito/antagonistas & inibidores , Serina Endopeptidases/metabolismo , Sulfonas/antagonistas & inibidores , Autoantígenos/imunologia , Catepsina G , Cromatografia Líquida de Alta Pressão , Humanos , Cinética , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Mieloblastina , Inibidores de Proteases/farmacologia , Relação Estrutura-Atividade
20.
Arch Biochem Biophys ; 332(2): 335-40, 1996 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-8806743

RESUMO

Amino acid-derived phthalimide and saccharin derivatives have been investigated for their inhibitory activity toward the serine proteinases human leukocyte elastase, cathepsin G, and proteinase 3. The saccharin derivatives were found to be effective time-dependent inhibitors of elastase and proteinase 3 (kobs/[I] values ranged between 180 and 3620 M-1 S-1) and showed weak or no inhibition toward cathepsin G. The corresponding phthalimide derivatives were found to be inactive.


Assuntos
Catepsinas/antagonistas & inibidores , Elastase de Leucócito/antagonistas & inibidores , Ftalimidas/farmacologia , Sacarina/análogos & derivados , Serina Endopeptidases/metabolismo , Inibidores de Serina Proteinase/farmacologia , Sequência de Aminoácidos , Animais , Sítios de Ligação , Catepsina G , Desenho de Fármacos , Humanos , Ligação de Hidrogênio , Técnicas In Vitro , Elastase de Leucócito/química , Elastase de Leucócito/genética , Leucócitos/enzimologia , Modelos Moleculares , Dados de Sequência Molecular , Mieloblastina , Ftalimidas/química , Conformação Proteica , Sacarina/química , Sacarina/farmacologia , Inibidores de Serina Proteinase/química , Relação Estrutura-Atividade
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