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1.
Mycologia ; 106(5): 1004-14, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24891412

RESUMO

Two boletes that frequently form fruiting bodies in Pseudomonotes tropenbosii forests are described from Colombian Amazonia. One is a new species of Austroboletus here described as A. amazonicus and the other one is Fistulinella campinaranae var. scrobiculata Singer, which is a new record for Colombia. Macromorphological, micromorphological and habitat data for these species are provided as well as DNA sequence data of the internal transcribed spacer (ITS) regions and the D1/D2 domains of the large subunit (LSU) ribosomal DNA.


Assuntos
Basidiomycota/classificação , Dipterocarpaceae/microbiologia , Micorrizas/classificação , Sequência de Bases , Basidiomycota/citologia , Basidiomycota/genética , Basidiomycota/isolamento & purificação , Colômbia , DNA Fúngico/genética , DNA Ribossômico/genética , DNA Espaçador Ribossômico/genética , Florestas , Carpóforos , Dados de Sequência Molecular , Micorrizas/citologia , Micorrizas/genética , Micorrizas/isolamento & purificação , Filogenia , Análise de Sequência de DNA , Esporos Fúngicos
2.
Antonie Van Leeuwenhoek ; 104(5): 657-74, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-23884864

RESUMO

The diversity of Trichoderma (Hypocreales, Ascomycota) colonizing leaf litter as well as the rhizosphere of Garcinia macrophylla (Clusiaceae) was investigated in primary and secondary rain forests in Colombian Amazonia. DNA barcoding of 107 strains based on the internal transcribed spacers 1 and 2 (ITS1 and 2) of the ribosomal RNA gene cluster and the partial sequence of the translation elongation factor 1 alpha (tef1) gene revealed that the diversity of Trichoderma was dominated (71 %) by three common cosmopolitan species, namely Trichoderma harzianum sensu lato (41 %), Trichoderma spirale (17 %) and Trichoderma koningiopsis (13 %). Four ITS 1 and 2 phylotypes (13 strains) could not be identified with certainty. Multigene phylogenetic analysis and phenotype profiling of four strains with an ITS1 and 2 phylotype similar to Trichoderma strigosum revealed a new sister species of the latter that is described here as Trichoderma strigosellum sp. nov. Sequence similarity searches revealed that this species also occurs in soils of Malaysia and Cameroon, suggesting a pantropical distribution.


Assuntos
Biodiversidade , Código de Barras de DNA Taxonômico , Microbiologia do Solo , Trichoderma/classificação , Trichoderma/genética , Análise por Conglomerados , Colômbia , DNA Fúngico/química , DNA Fúngico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Haplótipos , Técnicas Microbiológicas , Microscopia , Dados de Sequência Molecular , Filogenia , Análise de Sequência de DNA , Trichoderma/citologia , Trichoderma/isolamento & purificação
3.
Int J Syst Evol Microbiol ; 61(Pt 6): 1462-1475, 2011 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-20639229

RESUMO

Several species of the genus Penicillium were isolated during a survey of the mycobiota of leaf litter and soil in Colombian Amazon forest. Five species, Penicillium penarojense sp. nov. (type strain CBS 113178(T) = IBT 23262(T)), Penicillium wotroi sp. nov. (type strain CBS 118171(T) = IBT 23253(T)), Penicillium araracuarense sp. nov. (type strain CBS 113149(T) = IBT 23247(T)), Penicillium elleniae sp. nov. (type strain CBS 118135(T) = IBT 23229(T)) and Penicillium vanderhammenii sp. nov. (type strain CBS 126216(T) = IBT 23203(T)) are described here as novel species. Their taxonomic novelty was determined using a polyphasic approach, combining phenotypic, molecular (ITS and partial ß-tubulin sequences) and extrolite data. Phylogenetic analyses showed that each novel species formed a unique clade for both loci analysed and that they were most closely related to Penicillium simplicissimum, Penicillium janthinellum, Penicillium daleae and Penicillium brasilianum. An overview of the phylogeny of this taxonomically difficult group is presented, and 33 species are accepted. Each of the five novel species had a unique extrolite profile of known and uncharacterized metabolites and various compounds, such as penicillic acid, andrastin A, pulvilloric acid, paxillin, paspaline and janthitrem, were commonly produced by these phylogenetically related species. The novel species had a high growth rate on agar media, but could be distinguished from each other by several macro- and microscopical characteristics.


Assuntos
Penicillium/classificação , Penicillium/isolamento & purificação , Folhas de Planta/microbiologia , Análise por Conglomerados , Colômbia , DNA Fúngico/química , DNA Fúngico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Metaboloma , Dados de Sequência Molecular , Penicillium/química , Penicillium/genética , Filogenia , Análise de Sequência de DNA , Tubulina (Proteína)/genética
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