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1.
Small ; 14(15): e1704310, 2018 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-29498203

RESUMO

Cathode buffer layers (CBLs) can effectively further the efficiency of polymer solar cells (PSCs), after optimization of the active layer. Hidden between the active layer and cathode of the inverted PSC device configuration is the critical yet often unattended vertical diffusion of the active layer components across CBL. Here, a novel methodology of contrast variation with neutron and anomalous X-ray reflectivity to map the multicomponent depth compositions of inverted PSCs, covering from the active layer surface down to the bottom of the ZnO-based CBL, is developed. Uniquely revealed for a high-performance model PSC are the often overlooked porosity distributions of the ZnO-based CBL and the differential diffusions of the polymer PTB7-Th and fullerene derivative PC71 BM of the active layer into the CBL. Interface modification of the ZnO-based CBL with fullerene derivative PCBEOH for size-selective nanochannels can selectively improve the diffusion of PC71 BM more than that of the polymer. The deeper penetration of PC71 BM establishes a gradient distribution of fullerene derivatives over the ZnO/PCBE-OH CBL, resulting in markedly improved electron mobility and device efficiency of the inverted PSC. The result suggests a new CBL design concept of progressive matching of the conduction bands.

2.
ACS Appl Mater Interfaces ; 9(42): 36897-36906, 2017 Oct 25.
Artigo em Inglês | MEDLINE | ID: mdl-28984127

RESUMO

We have identified an often observed yet unresolved intermediate structure in a popular processing with dimethylformamide solutions of lead chloride and methylammonium iodide for perovskite solar cells. With subsecond time-resolved grazing-incidence X-ray scattering and X-ray photoemission spectroscopy, supplemental with ab initio calculation, the resolved intermediate structure (CH3NH3)2PbI2Cl2·CH3NH3I features two-dimensional (2D) perovskite bilayers of zigzagged lead-halide octahedra and sandwiched CH3NH3I layers. Such intermediate structure reveals a hidden correlation between the intermediate phase and the composition of the processing solution. Most importantly, the 2D perovskite lattice of the intermediate phase is largely crystallographically aligned with the [110] planes of the three-dimensional perovskite cubic phase; consequently, with sublimation of Cl ions from the organo-lead octahedral terminal corners in prolonged annealing, the zigzagged octahedral layers of the intermediate phase can merge with the intercalated methylammonium iodide layers for templated growth of perovskite crystals. Regulated by annealing temperature and the activation energies of the intermediate and perovskite, deduced from analysis of temperature-dependent structural kinetics, the intermediate phase is found to selectively mature first and then melt along the layering direction for epitaxial conversion into perovskite crystals. The unveiled epitaxial conversion under growth kinetics controls might be general for solution-processed and intermediate-templated perovskite formation.

3.
Biophys J ; 110(8): 1732-1743, 2016 04 26.
Artigo em Inglês | MEDLINE | ID: mdl-27119634

RESUMO

Dynamic water solvation is crucial to protein conformational reorganization and hence to protein structure and functionality. We report here the characterization of water dynamics on the L-asparaginase structural homology isozymes L-asparaginases I (AnsA) and II (AnsB), which are shown via fluorescence spectroscopy and dynamics in combination with molecular dynamics simulation to have distinct catalytic activity. By use of the tryptophan (Trp) analog probe 2,7-diaza-tryptophan ((2,7-aza)Trp), which exhibits unique water-catalyzed proton-transfer properties, AnsA and AnsB are shown to have drastically different local water environments surrounding the single Trp. In AnsA, (2,7-aza)Trp exhibits prominent green N(7)-H emission resulting from water-catalyzed excited-state proton transfer. In stark contrast, the N(7)-H emission is virtually absent in AnsB, which supports a water-accessible and a water-scant environment in the proximity of Trp for AnsA and AnsB, respectively. In addition, careful analysis of the emission spectra and corresponding relaxation dynamics, together with the results of molecular dynamics simulations, led us to propose two structural states associated with the rearrangement of the hydrogen-bond network in the vicinity of Trp for the two Ans. The water molecules revealed in the proximity of the Trp residue have semiquantitative correlation with the observed emission spectral variations of (2,7-aza)Trp between AnsA and AnsB. Titration of aspartate, a competitive inhibitor of Ans, revealed an increase in N(7)-H emission intensity in AnsA but no obvious spectral changes in AnsB. The changes in the emission profiles reflect the modulation of structural states by locally confined environment and trapped-water collective motions.


Assuntos
Asparaginase/química , Triptofano/química , Asparaginase/metabolismo , Biocatálise , Isoenzimas/química , Isoenzimas/metabolismo , Simulação de Dinâmica Molecular , Conformação Proteica , Homologia de Sequência de Aminoácidos , Espectrometria de Fluorescência , Água/química
4.
Nat Commun ; 4: 2611, 2013.
Artigo em Inglês | MEDLINE | ID: mdl-24177573

RESUMO

Scientists have made tremendous efforts to gain understanding of the water molecules in proteins via indirect measurements such as molecular dynamic simulation and/or probing the polarity of the local environment. Here we present a tryptophan analogue that exhibits remarkable water catalysed proton-transfer properties. The resulting multiple emissions provide unique fingerprints that can be exploited for direct sensing of a site-specific water environment in a protein without disrupting its native structure. Replacing tryptophan with the newly developed tryptophan analogue we sense different water environments surrounding the five tryptophans in human thromboxane A2 synthase. This development may lead to future research to probe how water molecules affect the folding, structures and activities of proteins.


Assuntos
Indóis/química , Prótons , Tromboxano-A Sintase/química , Triptofano/química , Água/análise , Técnicas Biossensoriais , Escherichia coli/genética , Escherichia coli/metabolismo , Humanos , Simulação de Dinâmica Molecular , Mutação , Proteínas Recombinantes , Espectrometria de Fluorescência , Tromboxano-A Sintase/genética , Triptofano/análogos & derivados , Água/química
5.
J Am Chem Soc ; 133(46): 18870-9, 2011 Nov 23.
Artigo em Inglês | MEDLINE | ID: mdl-21978190

RESUMO

In an aim to probe the structure-function relationship of prostacyclin synthase (PGIS), resonance Raman (RR) spectroscopy and molecular dynamic (MD) simulation approaches have been exploited to characterize the heme conformation and heme-protein matrix interactions for human PGIS (hPGIS) and zebrafish PGIS (zPGIS) in the presence and absence of ligands. The high-frequency RR (1300-1700 cm(-1)) indicates that the heme group is in the ferric, six-coordinate, low-spin state for both resting and ligand-bound hPGIS/zPGIS. The low-frequency RR (300-500 cm(-1)) and MD simulation reveal a salient difference in propionate-protein matrix interactions between hPGIS and zPGIS, as evident by a predominant propionate bending vibration at 386 cm(-1) in resting hPGIS, but two vibrations near 370 and 387 cm(-1) in resting zPGIS. Upon binding of a substrate analogue (U46619, U51605, or U44069), both hPGIS and zPGIS induce a distinctive perturbation of the propionate-protein matrix interactions, resulting in similar Raman shifts to ~381 cm(-1). On the contrary, the bending vibration remains unchanged upon binding of inhibitor/ligand (minoxidil, clotrimazole, or miconazole), indicating that these inhibitors/ligands do not interfere with the propionate-protein matrix interactions. These results, together with subtle changes in vinyl bending modes, demonstrate drastically different RR shifts with heme conformational changes in both hPGIS and zPGIS upon different ligand bindings, suggesting that PGIS exhibits a ligand-specific heme conformational change to accommodate the substrate binding. This substrate-induced modulation of the heme conformation may confer high product fidelity upon PGIS catalysis.


Assuntos
Sistema Enzimático do Citocromo P-450/química , Oxirredutases Intramoleculares/química , Simulação de Dinâmica Molecular , Prostaglandina H2/química , Prostaglandinas Sintéticas/química , Análise Espectral Raman , Inibidores das Enzimas do Citocromo P-450 , Sistema Enzimático do Citocromo P-450/metabolismo , Humanos , Oxirredutases Intramoleculares/antagonistas & inibidores , Oxirredutases Intramoleculares/metabolismo , Ligantes , Modelos Moleculares , Estrutura Molecular , Prostaglandina H2/metabolismo , Prostaglandinas Sintéticas/metabolismo
6.
J Phys Chem B ; 113(44): 14555-64, 2009 Nov 05.
Artigo em Inglês | MEDLINE | ID: mdl-19813735

RESUMO

We theoretically analyze the charge-transfer behavior of regioregular poly(3-hexylthiophene) (rr-P3HT) by quantum mechanical (QM) and molecular dynamics (MD) methods. In particular, we clarify the effects associated with the respective contribution from the ordered and disordered regions. In the ordered regions, the typical value of the hole mobility along the intrachain route is about 1 cm(2) V(-1) s(-1), which is significantly larger than that along the pi-pi interchain route, approximately 10(-2) cm(2) V(-1) s(-1). Our results indicate that the main charge-transfer route within the P3HT ordered lamellae is along the intrachain direction instead of the interchain direction. Moreover, the calculated hole mobility of 10(-2) cm(2) V(-1) s(-1) along the pi-pi interchain route is consistent with the experimental data measured in the P3HT single fibril. In the disordered regions, we propose a crossing-point/bridging-chain model to describe the charge-transport routes. In this model, the hole mobility can reach the limit of around 10(-2) and 1 cm(2) V(-1) s(-1) when the charge takes the interchain route through the crossing points and the intrachain route along the bridging chains, respectively. As expected, the resultant mobility in the disordered state is strongly affected by the ratio of the amount of crossing points and bridging chains. When considering the presence of both ordered and disordered regions, the average overall charge mobility is mainly dominated by the charge transport in the disordered regions. The fact that some of the experimentally measured hole mobility by varying the molecular weight is limited to a maximum value of 10(-2) cm(2) V(-1) s(-1) is mainly due to the presence of more crossing points instead of the bridging chains in the disordered regions. With increasing the amount of the bridging chains in the disordered regions, one can expect an enhancement of the charge mobility, such as to the experimentally obtained high value of 0.1 cm(2) V(-1) s(-1).

7.
J Phys Chem B ; 112(47): 14857-62, 2008 Nov 27.
Artigo em Inglês | MEDLINE | ID: mdl-18973359

RESUMO

We use quantum mechanical (QM) methods to interpret the charge transport properties of the self-assembled poly-3-hexylthiophene (P3HT) molecules along the intrachain and interchain directions. Our approach is illustrated by a hopping transport model, in which we examine the variation of the electron-coupling strength (transfer integral) with the torsional angle and the intermolecular distance between two adjacent thiophene segments. We also simulate the packed P3HT structures at various values of temperature and regioregularity via the molecular dynamics (MD) simulations. The MD results indicate that with decreasing the molecular regioregularity and/or increasing temperature, the P3HT backbone chains experience a larger distortion of the thiophene rings out of coplanarity, and thus the charge mobility along the main chains is reduced. However, as long as the P3HT molecules remain in the ordered lamellar state due to the presence of the pi-pi interaction, the resultant mobility along the pi-pi interchain direction is still significantly less than that along the intrachain direction. Accordingly, the main charge transfer route within the P3HT ordered domains is along the intrachains instead of the interchains.

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