Toxic tests show the sensitivity of the Daphnia similis (Crustacea, Cladocera) and Pseudokirchneriella subcapitata (Chlorophyceae) to commercial pesticides.

Pesticides have reached aquatic ecosystems and have caused numerous impacts on organisms. The present study aimed to assess the sensitivity of Daphnia similis Straus 1820 and Pseudokirchneriella subcapitata (Korshikov) F.Hindák to three commercial pesticides with different active ingredients: Siptran 500SC® (atrazine), Dimilin® (diflubenzuron), and Aproach Prima® (picoxystrobin + cyproconazole). For this purpose, we performed acute toxicity tests on these organisms. The compound most toxic to D. similis was the insecticide Dimilin® (toxic up to 5 µg/L of the active ingredient), followed by the fungicide Aproach Prima® (48h-EC50: 47.33 µg of the active ingredients/L) and the herbicide Siptran 500SC® (48h-EC50: 534.69 mg of the active ingredient/L). In contrast, Siptran 500SC® was the most toxic compound (96h-IC50: 52.61 µg/L) to P. subcapitata, followed by Aproach Prima® (96h-IC50: 164.73 µg/L) and Dimilin® (non-toxic up to 1 g/L). The toxicity of the fungicide to algae and microcrustaceans demonstrates that compounds developed for certain organisms are able to affect others, indicating the relevance of conducting ecotoxicological tests on different organisms.

Human pressure drives biodiversity-multifunctionality relationships in large Neotropical wetlands.

Many studies have shown that biodiversity regulates multiple ecological functions that are needed to maintain the productivity of a variety of ecosystem types. What is unknown is how human activities may alter the 'multifunctionality' of ecosystems through both direct impacts on ecosystems and indirect effects mediated by the loss of multifaceted biodiversity. Using an extensive database of 72 lakes spanning four large Neotropical wetlands in Brazil, we demonstrate that species richness and functional diversity across multiple larger (fish and macrophytes) and smaller (microcrustaceans, rotifers, protists and phytoplankton) groups of aquatic organisms are positively associated with ecosystem multifunctionality. Whereas the positive association between smaller organisms and multifunctionality broke down with increasing human pressure, this positive relationship was maintained for larger organisms despite the increase in human pressure. Human pressure impacted multifunctionality both directly and indirectly through reducing species richness and functional diversity of multiple organismal groups. These findings provide further empirical evidence about the importance of aquatic biodiversity for maintaining wetland multifunctionality. Despite the key role of biodiversity, human pressure reduces the diversity of multiple groups of aquatic organisms, eroding their positive impacts on a suite of ecological functions that sustain wetlands.

Environmental heterogeneity drives the distribution of copepods (Crustacea: Copepoda) in the Amazon, Araguaia, Pantanal, and Upper Paraná floodplains.

Environmental heterogeneity influences the physiology and behavior of organisms, leading to alterations in populations, communities, and ecosystems. This study was designed to evaluate the effect of the spatial and temporal limnological heterogeneity on the distribution of copepods in the Amazon River floodplain, Araguaia River floodplain, Pantanal floodplain, and Upper Paraná River floodplain. We performed dispersion homogeneity tests (PERMIDISP) to analyze the limnological heterogeneity, a Generalized Linear Mixed Model (GLMM) to test the relationship between limnological heterogeneity and species distribution, and a Canonical Correspondence Analysis (CCA) to analyze which limnological variables explain the variation in the community composition. In our study, we observed higher environmental heterogeneity during dry periods, especially in the Amazon floodplain. The Amazon showed the highest species richness (the total number of species that occurred in each floodplain), with endemic species, also the highest abundance of individuals, especially during dry periods, which was possibly due to the biogeography, the size of the basin, and the heterogeneity of the environments. The Pantanal presented the second highest species richness and showed the highest species richness and abundance of individuals during rainy periods. The distribution of copepods was highly correlated with environmental heterogeneity. The species were mainly related to temperature, nutrients, and depth.

Warming alters the metabolic rates and life-history parameters of Ceriodaphnia silvestrii (Cladocera).

Temperature rise has effects on the metabolic process of organisms, population structure, and ecosystem functioning. Here, we tested the effects of warming on the metabolic rates and life-history parameters of the widespread cladoceran Ceriodaphnia silvestrii. Two scenarios of global warming were established, an increase of 2 °C and an increase of 4 °C; the control temperature was 22°C. Our results showed that warming altered C. silvestrii metabolic rates, by increasing the rates of assimilation and secondary production, and decreasing the rates of filtration and ingestion. Warming also increased C. silvestrii fecundity and the body size of neonates and juveniles, and decreased the embryonic and post-embryonic time of development. C. silvestrii might be an important food resource at intermediary temperature as it had higher assimilation rates, even filtering fewer algae. At the highest temperature, we observed a substantial decrease in assimilation and secondary production, which could be a sign of stress starting. The increase in temperature by global warming will affect the cladocerans' metabolic processes and the population survival, even a small increase (2°C) might induce drastic fluctuations in such processes and affect the carbon and energy availability inside aquatic food-webs.

Predation by an omnivorous fish and food availability alter zooplankton functional diversity: a microcosm approach.

Studies considering the functional traits of organisms, populations, and communities functional indices increase the understanding of many factors on ecosystem functioning. Here, we analyze the predation effect (by fish) on zooplankton functional diversity and the effects of biomass and density of periphytic algae on zooplankton feeding type trait and body size. We expect that intense predation by fish on zooplankton leads to higher values of zooplankton functional diversity and that food resource will be positively related to the abundance of zooplankton trait and body size. For that, microcosms were established (T1- fish-absence, and T2- fish-presence, both with periphytic algae as food). We observed that fish presence decreased zooplankton functional diversity through modifications in the availability of nutrients and algae, through the middle-out effect. We also observed that body size had a negative relationship with the food resource, reaffirming that high food availability in subtropical lakes is linked to small-bodied zooplankton. The raptorial copepods covariate positively with the periphytic algae, which was an alternative food resource and, in this case, the main form of carbon input into the system. In this study, omnivorous fish reduced zooplankton functional traits, which can alter the energy stock and energy flow in aquatic ecosystems.

Differently dispersing organism groups show contrasting beta diversity patterns in a dammed subtropical river basin.

Although it is widely known that dams can have large impacts on the environmental and biological characteristics of downstream rivers, there is a substantial lack of studies focusing on which ecological processes cause longitudinal changes in biological communities downstream of reservoirs. We investigated longitudinal patterns in the total beta diversity and its replacement and richness difference components for actively (fish) and passively (phytoplankton) dispersing biological groups. Our results, obtained from a 230 km sampling stretch, demonstrated the key role played by tributaries in the downstream direction from main river impoundment, which influenced local environmental conditions and beta diversity patterns of each biological group. Both replacement and richness difference contributed to high values of total beta diversity for fish (average = 0.77) and phytoplankton (average = 0.79), but their relative importance was more associated with the replacement component for both biological groups (average = 0.45 and 0.52, respectively). Moreover, we observed clear differences between fish and phytoplankton in beta diversity patterns operating at small and broad scales, as well as in the mechanisms driving each beta diversity component. Directional dispersal-related processes and environmental filtering played a major role in shaping total beta diversity and its components for fish, while temporal factors explained considerable parts of phytoplankton beta diversity. Our findings contributed to understanding of tributary-induced heterogeneity and highlight the importance of dam-free stretches of rivers for preserving the integrity of dammed river basins.

Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing.

Modern metagenomic environmental DNA studies are almost completely reliant on next-generation sequencing, making evaluations of these methods critical. We compare two next-generation sequencing techniques - amplicon and shotgun - on water samples across four of Brazil's major river floodplain systems (Amazon, Araguaia, Paraná, and Pantanal). Less than 50% of phyla identified via amplicon sequencing were recovered from shotgun sequencing, clearly challenging the dogma that mid-depth shotgun recovers more diversity than amplicon-based approaches. Amplicon sequencing also revealed ~27% more families. Overall the amplicon data were more robust across both biodiversity and community ecology analyses at different taxonomic scales. Our work doubles the sampling size in similar environmental studies, and novelly integrates environmental data (e.g., pH, temperature, nutrients) from each site, revealing divergent correlations depending on which data are used. While myriad variants on NGS techniques and bioinformatic pipelines are available, our results point to core differences that have not been highlighted in any studies to date. Given the low number of taxa identified when coupling shotgun data with clade-based taxonomic algorithms, previous studies that quantified biodiversity using such bioinformatic tools should be viewed cautiously or re-analyzed. Nonetheless, shotgun has complementary advantages that should be weighed when designing projects.

A Global eDNA Comparison of Freshwater Bacterioplankton Assemblages Focusing on Large-River Floodplain Lakes of Brazil.

With its network of lotic and lentic habitats that shift during changes in seasonal connection, the tropical and subtropical large-river systems represent possibly the most dynamic of all aquatic environments. Pelagic water samples were collected from Brazilian floodplain lakes (total n = 58) in four flood-pulsed systems (Amazon [n = 21], Araguaia [n = 14], Paraná [n = 15], and Pantanal [n = 8]) in 2011-2012 and sequenced via 454 for bacterial environmental DNA using 16S amplicons; additional abiotic field and laboratory measurements were collected for the assayed lakes. We report here a global comparison of the bacterioplankton makeup of freshwater systems, focusing on a comparison of Brazilian lakes with similar freshwater systems across the globe. The results indicate a surprising similarity at higher taxonomic levels of the bacterioplankton in Brazilian freshwater with global sites. However, substantial novel diversity at the family level was also observed for the Brazilian freshwater systems. Brazilian freshwater bacterioplankton richness was relatively average globally. Ordination results indicate that Brazilian bacterioplankton composition is unique from other areas of the globe. Using Brazil-only ordinations, floodplain system differentiation most strongly correlated with dissolved oxygen, pH, and phosphate. Our data on Brazilian freshwater systems in combination with analysis of a collection of freshwater environmental samples from across the globe offers the first regional picture of bacterioplankton diversity in these important freshwater systems.

Dispersal ability determines the role of environmental, spatial and temporal drivers of metacommunity structure.

Recently, community ecologists are focusing on the relative importance of local environmental factors and proxies to dispersal limitation to explain spatial variation in community structure. Albeit less explored, temporal processes may also be important in explaining species composition variation in metacommunities occupying dynamic systems. We aimed to evaluate the relative role of environmental, spatial and temporal variables on the metacommunity structure of different organism groups in the Upper Paraná River floodplain (Brazil). We used data on macrophytes, fish, benthic macroinvertebrates, zooplankton, periphyton, and phytoplankton collected in up to 36 habitats during a total of eight sampling campaigns over two years. According to variation partitioning results, the importance of predictors varied among biological groups. Spatial predictors were particularly important for organisms with comparatively lower dispersal ability, such as aquatic macrophytes and fish. On the other hand, environmental predictors were particularly important for organisms with high dispersal ability, such as microalgae, indicating the importance of species sorting processes in shaping the community structure of these organisms. The importance of watercourse distances increased when spatial variables were the main predictors of metacommunity structure. The contribution of temporal predictors was low. Our results emphasize the strength of a trait-based analysis and of better defining spatial variables. More importantly, they supported the view that "all-or-nothing" interpretations on the mechanisms structuring metacommunities are rather the exception than the rule.

Correlates of zooplankton beta diversity in tropical lake systems.

The changes in species composition between habitat patches (beta diversity) are likely related to a number of factors, including environmental heterogeneity, connectivity, disturbance and productivity. Here, we used data from aquatic environments in five Brazilian regions over two years and two seasons (rainy and dry seasons or high and low water level periods in floodplain lakes) in each year to test hypotheses underlying zooplankton beta diversity variation. The regions present different levels of hydrological connectivity, where three regions present lakes that are permanent and connected with the main river, while the water bodies of the other two regions consist of permanent lakes and temporary ponds, with no hydrological connections between them. We tested for relationships between zooplankton beta diversity and environmental heterogeneity, spatial extent, hydrological connectivity, seasonality, disturbance and productivity. Negative relationships were detected between zooplankton beta diversity and both hydrological connectivity and disturbance (periodic dry-outs). Hydrological connectivity is likely to affect beta diversity by facilitating dispersal between habitats. In addition, the harsh environmental filter imposed by disturbance selected for only a small portion of the species from the regional pool that were able to cope with periodic dry-outs (e.g., those with a high production of resting eggs). In summary, this study suggests that faunal exchange and disturbance play important roles in structuring local zooplankton communities.

Intra and inter-annual structure of zooplankton communities in floodplain lakes: a long-term ecological research study

Water flow management has significantly changed the natural dynamic of floods, which are responsible for the structure and dynamic of aquatic communities in river-floodplain systems. With the aim to elaborate a conceptual framework that describes the main ecological factors associated with zooplankton community structure in the Upper Paraná River, we investigated the mechanisms that regulate the communities structure and their response to inter-annual and hydro-sedimentological variations in the floodplain and the biological factors associated with species abundance in those communities. For this we conducted samplings every six months (potamophase in March and limnophase in September) to characterize intra and inter-annual variations in community structure between 2000 and 2008. The intra-annual differences on the species richness, abundance, Shannon diversity index, and evenness, were conducted using Bayesian procedures to show probabilistic predictions of the data fit to main variation sources. Non-metric multi-dimensional scaling (NMDS), multi-response permutation procedure (MRPP), and indicator species analysis (IndVal) were run to assess and characterize the seasonality of the community structure. During high water (potamophase), hydrologic connectivity favoured exchange and dispersal of species in some lakes, increasing local diversity; during low water (limnophase), higher local productivity favoured opportunistic taxa, increasing species dominance and decreasing local diversity. Food resources and density of small-size fish were biological factors associated with the seasonal dynamic of the zooplankton community; these factors were dependent on hydrosedimentological phase (potamophase or limnophase). Water levels and limnological modifications related to water flow management have promoted replacement and impoverishment of aquatic biota in affected lakes and have indicated the ecological importance of a natural dynamic flood, which displays regular flood pulses. The conceptual model presented encompassed interactions between diverse environmental variables to more understandable mechanisms of the main sources of community variation.

El manejo del régimen de inundación ha cambiado de manera significativa la dinámica natural de las inundaciones, que son responsables de la estructura y dinámica de las comunidades acuáticas en sistemas río-planicie de inundación. En este sentido, investigamos cómo la estructura de las comunidades zooplanctónicas responde a variaciones estacionales e interanuales en los sistemas de llanura de inundación, y los factores biológicos asociados con la abundancia de especies de las comunidades zooplanctonicas. Elaboramos también, un marco conceptual que describe los principales factores ecológicos asociados con la estructura de las comunidades para los sistemas del Alto río Paraná. Para ello se realizaron muestreos cada seis meses (potamophase en marzo y en septiembre limnophase) para caracterizar las variaciones intra e interanuales en la estructura de la comunidad entre 2000 y 2008. Las diferencias estacionales de la riqueza de especies, abundancia, índice de diversidad de Shannon y equitatividad, se llevaron a cabo utilizando procedimientos Bayesianos para mostrar predicciones probabilísticas de los datos ajustados para las principales fuentes variación. Análisis de ordenamiento no-métrico multi-dimensional (NDMS); procedimientos de permutación de respuestas múltiples (MRPP) y análisis de especies indicadoras (IndVal) fueron utilizados para evaluar y clasificar la estacionalidad de la estructura de la comunidad. Durante aguas altas (potamofase), la conectividad hidrológica favoreció el intercambio y dispersión de las especies en algunas lagunas, incrementando la diversidad local; durante aguas bajas (limnofase), la alta productividad local favoreció los táxones oportunistas, incrementando las especies dominante y disminuyendo la diversidad local. La disponibilidad de recursos alimenticios y la densidad de pequeños peces fueron los factores biológicos asociados con la dinámica estacional de la comunidad zooplanctonica; los cuales dependen de la fase hidrosedimentológica (potamofase o limnofase). Modificaciones del régimen hidrológico y limnológico relacionados con el manejo de inundación han promovido el reemplazo y empobrecimiento de la biota acuática, en las lagunas sin conexión afectadas, enfatizando así la importancia ecológica de la dinámica natural de inundaciones, que presenta pulsos regulares de inundación. El modelo conceptual que se presenta abarca desde interacciones entre diversas variables ambientales hasta mecanismos más comprensibles de las principales fuentes de variación de la comunidad.

Intra and inter-annual structure of zooplankton communities in floodplain lakes: a long-term ecological research study.

Water flow management has significantly changed the natural dynamic of floods, which are responsible for the structure and dynamic of aquatic communities in river-floodplain systems. With the aim to elaborate a conceptual framework that describes the main ecological factors associated with zooplankton community structure in the Upper Paraná River, we investigated the mechanisms that regulate the communities structure and their response to inter-annual and hydro-sedimentological variations in the floodplain and the biological factors associated with species abundance in those communities. For this we conducted samplings every six months (potamophase in March and limnophase in September) to characterize intra and inter-annual variations in community structure between 2000 and 2008. The intra-annual differences on the species richness, abundance, Shannon diversity index, and evenness, were conducted using Bayesian procedures to show probabilistic predictions of the data fit to main variation sources. Non-metric multi-dimensional scaling (NMDS), multi-response permutation procedure (MRPP), and indicator species analysis (IndVal) were run to assess and characterize the seasonality of the community structure. During high water (potamophase), hydrologic connectivity favoured exchange and dispersal of species in some lakes, increasing local diversity; during low water (limnophase), higher local productivity favoured opportunistic taxa, increasing species dominance and decreasing local diversity. Food resources and density of small-size fish were biological factors associated with the seasonal dynamic of the zooplankton community; these factors were dependent on hydrosedimentological phase (potamophase or limnophase). Water levels and limnological modifications related to water flow management have promoted replacement and impoverishment of aquatic biota in affected lakes and have indicated the ecological importance of a natural dynamic flood, which displays regular flood pulses. The conceptual model presented encompassed interactions between diverse environmental variables to more understandable mechanisms of the main sources of community variation.