Huddling together to survive: Population density as a survival strategy of non-spore forming bacteria under nutrient starvation and desiccation at solid-air interfaces.

Acclimation and flexible response mechanisms are survival adaptations allowing prokaryotic cells to colonize diverse habitats and maintain viability in nature. Lack of water significantly impacts cellular response, which can be partially compensated for through community interactions and accessing survival means beyond the cell's boundaries. In the present study, higher numbers of cultivable Gram-positive Arthrobacter sp. and Gram-negative Pseudomonas stutzeri cells were found on surfaces when high population density was used after prolonged periods of desiccation and nutrient starvation. Total cell counts during desiccation periods decreased slower than culturable cell counts independently from initial population density. The presence of homogenate, prepared by filtering homogenized cultures through a 0.2 µm filter, extended culturability of Arthrobacter sp. cells, while intact heat-killed cells extended the culturability of Arthrobacter sp. and P. stutzeri. Our results suggest very slow cell membrane breakdown for desiccated bacterial cells at solid-air interfaces over extended time spans, which may serve as reservoirs of nutrients, and may potentially provide trace amounts of water for surviving cells. Higher initial population density and recycling of resources from "zombie"-like cells, may support growth in a similar fashion as access to cell lysates or the contents of heat-killed cells analogous to dead-phase cultures where some cells experience cryptic growth.

Growth and fecundity of colonizing hybrid Raphanus populations are environmentally dependent.

PREMISE: Hybrid gene pools harbor more genetic variation than progenitor populations. Thus, we expect hybrid populations to exhibit more dynamic evolutionary responses to environmental variation. We ask how environmental variation experienced by adapted and transplanted populations influence the success of late-generation hybrid populations during invasion. METHODS: For four generations, 20 wild (Raphanus raphanistrum) and 20 hybrid radish (R. sativus × R. raphanistrum) plant populations evolved under experimentally manipulated moisture conditions (dry, wet, control-sheltered, or control-unsheltered plots; i.e., evolutionary environment) in old fields near Toronto, Canada. We planted advanced-generation wild and hybrid radishes in sheltered plots and exposed them to either an evolutionary or a novel watering environment. To determine how soil moisture would influence invasion success, we compared the phenotype and fecundity of plants grown in these various environments. RESULTS: Hybridization produced larger plants. In wet environments, hybrid seedlings emerged more frequently and expressed higher photosynthetic activity. Low-moisture, novel conditions delayed and reduced seedling emergence frequency. Hybrid plants and those that evolved under relatively wet environments exhibited higher aboveground biomass. Hybrid plants from control-sheltered plots colonizing novel moisture environments were more fecund than comparable wild plants. CONCLUSIONS: Dry environments are less likely than other evolutionary environments to contribute colonists. However, relatively wet locations support the evolution of relatively fecund plants, especially crop-wild hybrid populations. Thus, our results provide a strong mechanistic explanation for variation in the relative success of crop-wild hybrids among study locations and a new standard for studies that assess the risk of crop-wild hybridization events.

Nitrogen and Phosphorus Loss Potential from Biosolids-Amended Soils and Biotic Response in the Receiving Water.

Application of municipal biosolids to agricultural soil can improve soil quality and improve crop yields. However, runoff or tile leachate from biosolids-applied fields may contribute to localized eutrophication of surface water. A laboratory experiment was conducted to determine loss potential of nutrients from soils amended with two different biosolids (anaerobically digested and chemically stabilized) relative to loss from a reference soil and to determine response in freshwater microcosms to nutrients lost from soils. Total phosphorus (TP) and total nitrogen (TN) were measured in runoff, and equivalent amounts were added to reference microcosms to determine if aquatic systems would respond similarly to TN and TP loading in bioavailable forms (PO, NH, NO) simulating loading related to inorganic fertilizer application. Nutrient concentrations (TP, TN, PO, NH, NO, and organic P and N) were similar in the runoff from the two biosolids-amended soils and higher than those in the runoff from the reference soil. Runoff from biosolids-amended soils stimulated algal growth and production (chlorophyll a and dissolved oxygen) relative to runoff from reference soil, but the response was weaker than in microcosms receiving equivalent amounts of inorganic N and P. Nutrient runoff from land-applied biosolids does have potential to increase algal production in receiving waters; however, this experiment suggests receiving waters may absorb a single large nutrient loading event associated with runoff from biosolids-amended soil without substantial impact. Moreover, the response to N and P in biosolids versus inorganic nutrient additions suggests biosolids may contribute relatively less to eutrophication than inorganic fertilizers, assuming equivalent TN and TP loading to aquatic systems.

Vegetation placement for summer built surface temperature moderation in an urban microclimate.

Urban vegetation can mitigate increases in summer air temperature by reducing the solar gain received by buildings. To quantify the temperature-moderating influence of city trees and vine-covered buildings, a total of 13 pairs of temperature loggers were installed on the surfaces of eight buildings in downtown Toronto, Canada, for 6 months during the summer of 2008. One logger in each pair was shaded by vegetation while the other measured built surface temperature in full sunlight. We investigated the temperature-moderating benefits of solitary mature trees, clusters of trees, and perennial vines using a linear-mixed model and a multiple regression analysis of degree hour difference. We then assessed the temperature-moderating effect of leaf area, plant size and proximity to building, and plant location relative to solar path. During a period of high solar intensity, we measured an average temperature differential of 11.7 °C, with as many as 10-12 h of sustained cooler built surface temperatures. Vegetation on the west-facing aspect of built structures provided the greatest temperature moderation, with maximum benefit (peak temperature difference) occurring late in the afternoon. Large mature trees growing within 5 m of buildings showed the greatest ability to moderate built surface temperature, with those growing in clusters delivering limited additional benefit compared with isolated trees. Perennial vines proved as effective as trees at moderating rise in built surface temperature to the south and west sides of buildings, providing an attractive alternative to shade trees where soil volume and space are limited.

Utilization of multiple organisms in a proposed early-warning biomonitoring system for real-time detection of contaminants: preliminary results and modeling.

During past decades, biomonitors were deployed in lakes and rivers to rapidly detect hazardous chemicals by measuring the endpoints of a single aquatic species at defined short intervals. Most biomonitors, however, are only capable of indicating a departure from baseline water conditions without identifying the cause. In order to provide a more comprehensive assessment, a biomonitoring system which features a library of stereotyped responses of multiple aquatic species in various water conditions is proposed. A preliminary library was constructed by characterizing the behavioural and physiological responses of Daphnia magna, Hyalella azteca, Lumbriculus variegatus, and Pseudokirchneriella subcapitata to various concentrations of atrazine and tributyltin. By employing multivariate statistical tools such as principal component analysis (PCA) and discriminant analysis, this library (which contained responses after 6h of exposure to contaminants) was used as a template to classify and to model other sets of earlier measurements at 2 and 4h, resulting in an accuracy of 73 and 97%, respectively. These findings demonstrated the potential capability of the proposed early-warning biomonitoring system to provide real-time water quality assessment and early-warning contaminant detection.

Assessment of the working range and effect of sodium dichloroisocyanurate on Pseudomonas aeruginosa biofilms and planktonic cells.

Sodium dichloroisocyanurate (NaDCC) is a chemical agent that acts against microorganisms in a manner similar to that of sodium hypochlorite by releasing free available chlorine. NaDCC has been approved by the WHO for the emergency treatment of water and by the US EPA for routine treatment of water. Previous studies assessing the effectiveness of NaDCC for the treatment of water implied that NaDCC should have a wide array of disinfecting effects beyond the treatment of planktonic cells in potable water. In this study the biocidal effects of NaDCC against Pseudomonas aeruginosa cells in different growth modes including planktonic cells and biofilms were explored. The data showed that a 60% dilution of the standard NaDCC solution was effective in the treatment of both P. aeruginosa planktonic cells and biofilms.

Evaluation of low-copy genetic targets for waterborne bacterial pathogen detection via qPCR.

Recent developments in water quality research have highlighted difficulties in accurately predicting the incidence of pathogens within freshwater based on the viability, culturability and metabolic activity of indicator organisms. QPCR-driven assays are candidates to replace standard culture-based methods, however, protocols suitable for routine use have yet to be sufficiently validated. The objective of this study was to evaluate five oligonucleotide primers sets (ETIR, SINV, exoT, VS1 and ipaH2) for their potential applicability in qPCR assays to detect contamination from five waterborne bacterial pathogens (Escherichia coli O157:H7, Salmonella Typhimurium, Campylobacter jejuni, Pseudomonas aeruginosa, and Shigella flexneri). An enrichment-free qPCR protocol was also tested using S. Typhimurium-seeded source water, combining membrane filtration and mechanical, chemical and enzymatic lysis techniques to recover the bacterial cells. All five primer sets were found to have high specificity and sensitivity for the tested organisms. Four of the primers were able to detect pathogen loads as low as 10 cells/mL while 200 cells/mL of C. jejuni were detectable in pure culture. Although sensitivity decreased in an artificially contaminated environmental matrix, it was still possible to detect as few as 10 S. Typhimurium cells without enrichment. The primers and protocols evaluated in this study have demonstrated potential for further validation for possible application alongside traditional indicator techniques.

Do zebra mussels (Dreissena polymorpha) alter lake water chemistry in a way that favours Microcystis growth?

This study examined possible relationships between the presence of zebra mussels (Dreissena polymorpha) and Microcystis spp. abundance. Experiments were conducted in 12 microcosms designed to mimic shallow lake ecosystems. Fresh, aerated water with phytoplankton (pseudokirchneriella spp. and Microcystis spp.) was pumped into each microcosm daily to ensure zebra mussels were exposed to oxygen and food. Microcosms containing zebra mussels experienced significantly higher fluxes of nitrate (p=0.019) and lower fluxes of ortho-phosphate (p=0.047) into sediments. In a second experiment, water column nutrient concentrations were compared in microcosms with and without live zebra mussels. Consistent with results of the previous experiment, microcosms with zebra mussels had significantly less nitrate (p=0.023) and organic nitrogen (p=0.003) in the water column, while ammonium (p=0.074), phosphate (p=0.491), and dissolved organic carbon (p=0.820) in the water column were not different between microcosms with or without zebra mussels. Microcosms with zebra mussels also experienced a reduction in green algae (pseudokirchneriella) (p<0.001) and an increase in abundance of Microcystis (p<0.001) relative to microcosms without zebra mussels. In an experiment without zebra mussels, nutrient ratios (N/P) were manipulated to determine potential links between N/P and relative abundance of each phytoplankton. Manipulation of N/P was intended to mimic differences observed in microcosms with and without zebra mussels in the previous experiment. Low N/P (mimicking microcosms with zebra mussels) was related to an increase in Microcystis (p<0.001) and Microcystis/Pseudokirchneriella biovolume (p<0.001). It is this shift in N/P, and possibly some level of selective feeding, that is believed to have driven changes in the relative abundance of Microcystis. In lakes invaded by zebra mussels, alterations in the processing of nitrogen and phosphorus could contribute to the re-emergence of Microcystis blooms.