First Report of Nalanthamala psidii causing wilt disease of guava in Guangdong, China.

Guava (Psidium guajava L.) is a tropical fruit with great economic value. Guangdong is one of the most important guava production areas. In November 2019, guava wilt disease (GWD) was observed in a 10.6 HA commercial orchard in NanSha district, Guangzhou, Guangdong (22°37'37.626" N, 113°35'56.089" E). Disease incidence was up to 35%. Initially, leaves on the top of some branches became purple or yellow interveinal chlorosis, later dry. Infection severely became systemic developing vascular discoloration of stem, black root rot, eventually entire trees wilted and died. The root tissues were cut into 5-mm2 pieces and surface disinfected with 70% ethanol for 30 sec, 3 % sodium hypochlorite for 4 min, rinsed by the sterile water, then plated onto potato dextrose agar and incubated for 5 days at 25°C. A total of 8 monoconidial isolates with identical colony morphology were obtained. All formed cottony, whitish to pale yellow colonies. Conidiophores were dimorphic, penicillate and acremonium-like. Penicillate conidiophores gave rise to ovoidal, one-celled conidia (4.15 to 6.55×2.28 to 4.61 µm) (n=100) with truncated ends. Cylindrical or fusiform conidia (7.02 to 15.57×2.01 to 5.30 µm) (n=100) arose in long chains on acremonium-like conidiophores. Morphological characteristics of the isolates were consistent with those of Nalanthamala psidii (syn. Myxosporium psidii) reported by Schroers (2005). The rDNA internal transcribed spacer (ITS) and partial nuclear large-subunit ribosomal DNA (LSU) of two representative isolates (GDNS02 and GDNS08) were amplified using the primers pairs ITS4/ITS5 (White et al. 1990) and V9G/LR5 (de Hoog and Gerrits van den. 1998), respectively. The obtained sequences were deposited in GenBank under the accession nos. OM278372 to 73 (ITS) and OM278377 to 78 (LSU). BLASTn analysis showed 99.81% and 100% identities with the reported sequences of N. psidii CBS 116952 (AY864836) and CBS 110507 (AY554243). Maximum likelihood analyses of combined ITS and LSU sequences indicated that these two isolates being clustered with N. psidii strains. Pathogenicity tests were performed twice using healthy seedlings (60-70 cm height, cv. pearl). Each stem of five seedlings was wounded using a 5-mm sterile cork borer, and 5-day-old mycelium plugs of isolate GDNS08 were inoculated into the holes (25-cm above the soil line) and covered with Parafilm, sterile PDA plugs were placed into the wounds of additional 5 control seedlings. All plants were kept in a greenhouse (25℃, 80% relative humidity, 16/8-h day/night). After 3 months, all inoculated plants developed purple leaf, defoliation and wilt symptoms resembling those observed in the orchards, while the controls remained asymptomatic. Nalanthamala psidii was reisolated from the roots tissue of the inoculated plants, identity was confirmed by morphological characteristics and ITS sequence analyses as described above, but not from the controls, fulfilling Koch's postulates. Nalanthamala psidii has been previously reported as the causal agent of guava wilt in Taiwan, Philippines, South Africa and Bangladesh (Hsieh et al. 1976; Opina 1995; Schoeman et al. 1997; Alam et al. 2019). To our knowledge, this is the first report of N. psidii causing guava wilt in Guangdong, China. The outbreak of GWD in South Africa in the 1980s resulted in devastating losses to guava industry (Schoeman et al. 1997). Further research is needed to develop the integrated management to constrain this disease from spreading.

Environmental regulations on bacterial abundance in the South China Sea inferred from regression models.

Bacteria play a critical role in carbon cycling and nutrient remineralization. To reveal potential mechanisms controlling bacterial abundance in the upper 200 m of the South China Sea (SCS), the generalized linear model (GLM), generalized additive model (GAM) and generalized boosted model (GBM) were constructed to address the relationship between bacterial abundance and environmental factors, including geographical variables, biotic variables and water chemistry. GAM and GBM were found suitable for modeling bacterial abundance in the SCS. The predictive performance of GBM was superior to GLM and GAM for bacterial distribution. In addition, bacterial abundance predicted by GBM from environmental parameters was highly consistent with the observations, indicating that GBM was robust to predict bacterial abundance from environmental parameters. Furthermore, the key environmental factors modulating the horizontal and vertical distribution of bacteria were determined based on models. Horizontally, surface bacterial abundance decreased from onshore to offshore, which was primarily regulated by salinity and chlorophyll-a. Vertically, bacterial abundance decreased with depth. Chlorophyll-a was primarily responsible for vertical variability in bacterial abundance in the upper 100 m, where temperature was higher than the optimum temperature (21 °C) for bacterial growth. In contrast, temperature was a dominant factor regulating bacterial abundance below 100 m, where temperature was below 21 °C and positively correlated with BA. Viruses and nutrients played less important roles in regulating bacterial abundance than chlorophyll-a and temperature in the SCS. Our models elucidated environmental regulations on bacterial abundance, which was helpful for us to understand bacterial carbon cycling in the SCS.

LINC00893 inhibits papillary thyroid cancer by suppressing AKT pathway via stabilizing PTEN.

Long non-coding RNAs (lncRNAs) are important to the occurrence and advancement of human cancers. We found through GEPIA that LINC00893 was lowly expressed in thyroid carcinoma (THCA) tissues, whereas the specific functions of LINC00893 has never been reported in PTC. In the current study, we confirmed that LINC00893 was expressed at a low level in PTC cells. Through gain-of-function assays, we determined that LINC00893 overexpression abrogated proliferation and migration abilities of PTC cells. Through signal transduction reporter array we found that LINC00893 potentially modulated the signals of phosphatase and tensin homolog (PTEN)/AKT pathway. In addition, overexpression of LINC00893 increased the expression of PTEN but reduced the levels of phosphorylated AKT in PTC. Additionally, mechanism assays unveiled that LINC00893 stabilized PTEN mRNA via recruiting Fused in sarcoma (FUS) protein. Finally, rescue assays demonstrated that LINC00893 hampered the proliferation and migration of PTC cells via PTEN/AKT pathway. Together, our study first clarified that LINC00893 functions as a tumor suppressor in PTC by blocking AKT pathway through PTEN upregulation.

The role of FOXD2-AS1 in cancer: a comprehensive study based on data mining and published articles.

BACKGROUND AND AIMS: Long non-coding RNA (lncRNA) FOXD2 adjacent opposite strand RNA 1 (FOXD2-AS1) is aberrantly expressed in various cancers and associated with cancer progression. A comprehensive meta-analysis was performed based on published literature and data in the Gene Expression Omnibus database, and then the Cancer Genome Atlas (TCGA) dataset was used to assess the clinicopathological and prognostic value of FOXD2-AS1 in cancer patients. METHODS: Gene Expression Omnibus databases of microarray data and published articles were used for meta-analysis, and TCGA dataset was also explored using the GEPIA analysis program. Hazard ratios (HRs) and pooled odds ratios (ORs) with 95% confidence intervals (CIs) were used to assess the role of FOXD2-AS1 in cancers. RESULTS: This meta-analysis included 21 studies with 2391 patients and 25 GEO datasets with 3311 patients. The pooled HRs suggested that highly expressed FOXD2-AS1 expression was correlated with poor overall survival (OS) and disease-free survival (DFS). Similar results were obtained by analysis of TCGA data for 9502 patients. The pooled results also indicated that FOXD2-AS1 expression was associated with bigger tumor size and advanced TNM stage, but was not related to age, gender, differentiation and lymph node metastasis. CONCLUSION: The present study demonstrated that FOXD2-AS1 is closely related to tumor size and TNM stage. Additionally, increased FOXD2-AS1 was a risk factor of OS and DFS in cancer patients, suggesting FOXD2-AS1 may be a potential biomarker in human cancers.

Influences of phosphorus concentration and porewater advection on phosphorus dynamics in carbonate sands around the Weizhou Island, northern South China Sea.

A series of flow-through reactor experiments were undertaken to assess the potential effect of porewater advection and dissolved inorganic phosphorus (DIP) concentration on benthic DIP dynamics in permeable sediments collected from the Weizhou Island, northern South China Sea. The flux of DIP ranged from -0.13 to 0.05 mmol m-2 h-1, and the reversal from DIP efflux to influx occurred when the DIP concentration reached a threshold. DIP release from the sediment into the seawater peaked at intermediate advection rate, which perhaps provide optimum conditions for DIP release related to CaCO3 dissolution. Phosphorus limitation in seawater could be relieved by DIP release from the sediment, and CaCO3-bound P in carbonate sands may play a major role in benthic DIP release and decrease in the molar nitrogen/phosphorus ratio in seawater around the Weizhou Island.

Spatiotemporal variations of biogenic elements and sources of sedimentary organic matter in the largest oyster mariculture bay (Maowei Sea), Southwest China.

China is the largest mariculture producer in the world, but detailed information on the spatiotemporal variations of biogenic elements and sources of sedimentary organic matter (SOM) via mariculture is limited. The primary objective of this study was to assess the influence of mariculture on the origin of SOM in relation with biogenic elements and geochemical paramaters due to the importance of SOM as a potential source of nutrients and energy in coastal marine environments. Surface sediments from the Maowei Sea were collected in August (summer) and December (winter), 2016 for grain size, total organic carbon (TOC), total nitrogen (TN), organic phosphorus (OP), biogenic silica (BSi), δ13C and δ15N analyses. Significant correlation (p < 0.01) was observed between TOC and TN in summer and winter respectively, indicating that they have common source in both seasons. The spatiotemporal distributions of TOC, TN, OP and BSi were influenced by the sources and distribution of SOM, grain sizes and hydrodynamic conditions in the Maowei Sea. The overall ranges of δ13C (-26.86‰ to -23.01‰) and δ15N (2.54‰ to 9.82‰) and C/N ratio (5.83 to 18.67) showed that SOM is derived from mixed sources. The δ13C and δ15N-based three-end-member mixing model results revealed that >40% of the deposited SOM originates from terrestrial source during two seasons. The SOM from shellfish mariculture was seasonal, mainly deposited in the intensive mariculture areas, and its proportions were only higher than contributions from marine plankton in summer. Generally, this study indicates that shellfish biodepositions can significantly influence the cycle of carbon and other biogenic elements in the intensive mariculture areas. Nevertheless, the overall dominance of terrestrial and marine SOM suggests that the sources of SOM and factors influencing carbon cycling in the Maowei Sea do not exclusively depend on the intensity of mariculture activities.

Fabrication and evaluation of flexible electrowetting display with support pillars.

With the development of portable and wearable devices, flexible displays have attracted extensive interest and have become increasingly important in our daily life. In this study, a flexible electrowetting display (FEWD) was proposed and fabricated. To prevent a short circuit between the top and bottom electrodes, various types of support pillars were fabricated on the top substrates through a photolithography technique. The FEWD was measured under positive and negative bending conditions, with the applied voltage increasing from 0 to 24 V. The aperture ratio and response time were investigated to better evaluate and understand the performance of the FEWD. The mechanical properties of the support pillars and the FEWD were evaluated by means of compression force and cyclic bending tests, respectively. The results showed that the FEWD operated properly at 24 V under a bending curvature of 0.25 cm-1, achieving the largest aperture ratio of 54.96%. Moreover, the oil movement could be influenced by the support pillars in the pixel. With the advantages of both optical performance and flexibility, an FEWD with support pillars is a novel item for future development of reflective transparent displays and provides a promising strategy for developing flexible, wearable, and visible devices.

The prognostic value of LINC01296 in pan-cancers and the molecular regulatory mechanism in hepatocellular carcinoma: a comprehensive study based on data mining, bioinformatics, and in vitro validation.

BACKGROUND AND AIMS: This study aimed to clarify the prognostic role of LINC01296 in various cancers, and to evaluate its effect on proliferation, metastasis, and the cell cycle in hepatocellular carcinoma (HCC) by data mining, bioinformatics, and in vitro validation. METHODS: The prognostic role of LINC01296 in cancer patients was assessed by searching the PubMed, Embase, Web of Science, and Gene Expression Omnibus databases and calculating pooled hazard ratios (HRs) with 95% confidence intervals (CIs); this prognostic role was also evaluated using The Cancer Genome Atlas (TCGA). We detected LINC01296 expression in HCC cell lines, and lentivirus-mediated small interfering RNAs were used to silence LINC01296 in MHCC97H and Hep3B cells to explore the role of LINC01296 in cell proliferation, metastasis, and cell cycle progression with in vitro validation and bioinformatics. RESULTS: The results indicated that LINC01296 overexpression was associated with poor overall survival (OS) and disease-free survival (DFS) in various cancers; however, LINC01296 expression was not associated with recurrence-free survival (RFS). Similar results were found with TCGA, which showed that LINC01296 expression was associated with the pathologic stage, tumor size, and differentiation in Asian cancer patients. Additionally, bioinformatics analysis revealed expression of 394 related genes, which indicated that LINC01296 could be involved in the tumorigenesis and progression of HCC. In vitro gene silencing experiments indicated that LINC01296 downregulation repressed cell proliferation, cell cycle progression, and the metastatic potential of HCC through the regulation of BUB1, CCNA2, and CDK1 expression. CONCLUSION: This study demonstrated that LINC01296 expression is related to poor OS and DFS in a variety of cancer types and that LINC01296 has an oncogenic role in HCC.

Response of Bacterial Metabolic Activity to the River Discharge in the Pearl River Estuary: Implication for CO2 Degassing Fluxes.

Bacterial production (BP), respiration (BR) and growth efficiency (BGE) were simultaneously determined along an environmental gradient in the Pearl River Estuary (PRE) in the wet season (May 2015) and the dry season (January 2016), in order to examine bacterial responses to the riverine dissolved organic carbon (DOC) in the PRE. The Pearl River discharge delivered labile dissolved organic matters (DOM) with low DOC:DON ratio, resulting in a clear gradient in DOC concentrations and DOC:DON ratios. BP (3.93-144 µg C L-1 d-1) was more variable than BR (64.6-567 µg C L-1 d-1) in terms of the percentage, along an environmental gradient in the PRE. In response to riverine DOC input, BP and the cell-specific BP increased; in contrast, the cell-specific bacterial respiration declined, likely because labile riverine DOC mitigated energetic cost for cell maintenance. Consequently, an increase in bacterial respiration was less than expected. Our findings implied that the input of highly bioavailable riverine DOC altered the carbon portioning between anabolic and catabolic pathways, consequently decreasing the fraction of DOC that bacterioplankton utilized for bacterial respiration. This might be one of the underlying mechanisms for the low CO2 degassing in the PRE receiving large amounts of sewage DOC.

Circular RNA EIF6 (Hsa_circ_0060060) sponges miR-144-3p to promote the cisplatin-resistance of human thyroid carcinoma cells by autophagy regulation.

Anaplastic thyroid carcinoma (ATC) responds for the majority of death of thyroid carcinoma and often causes chemotherapy resistance. We investigated the influence of circEIF6 (Hsa_circ_0060060) on the cisplatin-sensitivity in papillary thyroid carcinoma (PTC) and ATC cells, and explored its regulation to downstream molecules miR-144-3p and Transforming Growth Factor α (TGF-α). Differentially expressed circRNAs in PTC were analyzed using the GSE93522 data downloaded. Expressions of circEIF6, miR-144-3p, TGF-α, autophagy-related proteins and apoptosis-related proteins were determined using qRT-PCR or western blot. RNA pull-down assay and dual luciferase report assay were applied to reveal the target relationships. Autophagy marker LC3 and cell proliferation marker ki67 were evaluated by immunofluorescence and immunohistochemistry. Cell viability was evaluated with MTT assay and cell apoptosis was assessed by flow cytometric analysis. CircEIF6, could promote autophagy induced by cisplatin, thus inhibiting cell apoptosis and enhancing the resistance of PTC and ATC cells to cisplatin. Has-miR-144-3p was the target of circEIF6 and was regulated by circEIF6. Besides, circEIF6 promoted autophagy by regulating miR-144-3p/TGF-α axis, enhancing the cisplatin-resistance in PTC and ATC cells. CircEIF6 promoted tumor growth by regulating miR-144-3p/TGF-α and circEIF6 knock-down enhanced cisplatin sensitivity in vivo. CircEIF6 could provide a target for therapy of cisplatin-resistance in thyroid carcinoma.

Study on activation and improvement of crop seeds by the application of plasma treating seeds equipment.

Plasma technology is applied in various fields, which involves in stimulating the germinability and amelioration of crop seeds, increasing crop production and displaying high quality, stress tolerance and other beneficial traits. Crucial techniques of plasma treating seeds (PTS) are introduced and the technical applications of activating seeds with key parameters of plasma discharge equipment are discussed. With a lot of laboratory researches and field tests, the biological effects of non-thermal PTS are analyzed. Meanwhile, a preliminary discussion about the PTS mechanism and technical popularization is made. Main findings including non-thermal plasma treatment are as follows: (i) the germination rates of the maize seeds were 72% or so if treated by 140 W-160 W power, which was the highest; (ii) the length of the wheat radicle and germ was increased effectively by 8.7 cm and 3.3 cm, and the dry weight of the wheat was increased by 10.1%; (iii) the germinative energy and germinating percentage of the aging seeds could be greatly increased. It is concluded that PTS enhances seed germination as well as plant growth, meanwhile, more crops are yielded and the quality is improved. Both technologies and plasma discharge equipment have significant applicative value and popularize in agriculture.

Long non-coding RNA PCAT-1 in human cancers: A meta-analysis.

BACKGROUND AND AIMS: Prostate cancer-associated non-coding RNA transcript-1(PCAT-1), which is a newly discovered long non-coding RNA, is up-regulated in various cancers. We conducted a meta-analysis to assess the clinicopathological and prognostic value of PCAT-1 in patients with malignant tumors. METHODS: A systematic literature search involved PubMed, Medline, Cochrane Library, Web of Science, EMBASE database, Ovid, Chinese CNKI, and the Chinese WanFang database. The role of PCAT-1 in cancers was evaluated by pooled odds ratios (ORs) and hazard ratios (HRs) with 95% confidence intervals (CIs). RESULTS: A total of 1005 patients from nine studies were included in this meta-analysis. High expression of PCAT-1 was associated with depth of infiltration, lymph node metastasis, distant metastasis and TNM stage. However, increased PCAT-1 expression was not related to gender, tumor size and differentiation. Moreover, high PCAT-1 expression was associated with poor overall survival (OS) and disease-free survival (DFS), and the pooled results suggested that PCAT-1 expression can be an independent predictive factor for overall survival. CONCLUSION: This meta-analysis provides evidence that PCAT-1 expression is closely correlated with depth of infiltration, lymph node metastasis, distant metastasis and TNM stage, and that increased PCAT-1 expression may be a potential prognostic biomarker in human cancers. However, more large-scale studies are warranted.

Spatiotemporal Variability in Phosphorus Species in the Pearl River Estuary: Influence of the River Discharge.

Phosphorus was the stoichiometrically limiting nutrient in the Pearl River Estuary (PRE). In order to examine how the river discharge regulates phosphorus dynamics in the PRE, the concentrations of dissolved inorganic phosphorus (DIP) and organic phosphorus (DOP), particulate inorganic phosphorus (PIP) and organic phosphorus (POP) in the water column were determined in May 2015 (spring), August 2015 (summer) and January 2016 (winter). Our results showed that all types of phosphorus were significantly lower in spring and summer than in winter. The Pearl River discharge input played an important role in regulating phosphorus dynamics. Strong vertical mixing in winter resulted in high levels of total particulate phosphorus (1.50 ± 0.97 µM) and dissolved phosphate (DIP: 1.44 ± 0.57 µM, DOP: 0.58 ± 0.42 µM) at the surface. On the other hand, the river discharge input created stratification in spring and summer, favoring the settlement of suspended particulate matter and enhancing light levels. This promoted phytoplankton growth, which was responsible for a DIP drawdown of 0.43 ± 0.37 µM in May and 0.56 ± 0.42 µM in August at the surface. Additionally, stratification restricted the bottom phosphorus replenishment. Our findings provided an insight into processes causing stoichiometric P limitation in the PRE.

Stacking fault energy of face-centered cubic metals: thermodynamic and ab initio approaches.

The formation energy of the interface between face-centered cubic (fcc) and hexagonal close packed (hcp) structures is a key parameter in determining the stacking fault energy (SFE) of fcc metals and alloys using thermodynamic calculations. It is often assumed that the contribution of the planar fault energy to the SFE has the same order of magnitude as the bulk part, and thus the lack of precise information about it can become the limiting factor in thermodynamic predictions. Here, we differentiate between the interfacial energy for the coherent fcc(1 1 1)/hcp(0 0 0 1) interface and the 'pseudo-interfacial energy' that enters the thermodynamic expression for the SFE. Using first-principles calculations, we determine the coherent and pseudo-interfacial energies for six elemental metals (Al, Ni, Cu, Ag, Pt, and Au) and three paramagnetic Fe-Cr-Ni alloys. Our results show that the two interfacial energies significantly differ from each other. We observe a strong chemistry dependence for both interfacial energies. The calculated pseudo-interfacial energies for the Fe-Cr-Ni steels agree well with the available literature data. We discuss the effects of strain on the description of planar faults via thermodynamic and ab initio approaches.

Ab initio calculations of mechanical properties of bcc W-Re-Os random alloys: effects of transmutation of W.

To examine the effect of neutron transmutation on tungsten as the first wall material of fusion reactors, the elastic properties of W1-x-y Re x Os y (0 ⩽ x, y ⩽ 6%) random alloys in body centered cubic (bcc) structure are investigated systematically using the all-electron exact muffin-tin orbitals (EMTO) method in combination with the coherent-potential approximation (CPA). The calculated lattice constant and elastic properties of pure W are consistent with available experiments. Both Os and Re additions reduce the lattice constant and increase the bulk modulus of W, with Os having the stronger effect. The polycrystalline shear modulus, Young's modulus and the Debye temperature increase (decrease) with the addition of Re (Os). Except for C 11, the other elastic parameters including C 12, C 44, Cauchy pressure, Poisson ratio, B/G, increase as a function of Re and Os concentration. The variations of the latter three parameters and the trend in the ratio of cleavage energy to shear modulus for the most dominant slip system indicate that the ductility of the alloy enhances with increasing Re and Os content. The calculated elastic anisotropy of bcc W slightly increases with the concentration of both alloying elements. The estimated melting temperatures of the W-Re-Os alloy suggest that Re or Os addition will reduce the melting temperature of pure W solid. The classical Labusch-Nabarro model for solid-solution hardening predicts larger strengthening effects in W1-y Os y than in W1-x Re x . A strong correlation between C' and the fcc-bcc structural energy difference for W1-x-y Re x Os y is revealed demonstrating that canonical band structure dictates the alloying effect on C'. The structural energy difference is exploited to estimate the alloying effect on the ideal tensile strength in the [0 0 1] direction.

An innovative method for water resources carrying capacity research--Metabolic theory of regional water resources.

The shortage and uneven spatial and temporal distribution of water resources has seriously restricted the sustainable development of regional society and economy. In this study, a metabolic theory for regional water resources was proposed by introducing the biological metabolism concept into the carrying capacity of regional water resources. In the organic metabolic process of water resources, the socio-economic system consumes water resources, while products, services and pollutants, etc. are output. Furthermore, an evaluation index system which takes into the characteristics of the regional water resources, the socio-economic system and the sustainable development principle was established based on the proposed theory. The theory was then applied to a case study to prove its availability. Further, suggestions aiming at improving the regional water carrying capacity were given on the basis of a comprehensive analysis of the current water resources situation.