Sequence-Dependent Photocurrent Generation through Long-Distance Excess-Electron Transfer in DNA.

Given its well-ordered continuous π stacking of nucleobases, DNA has been considered as a biomaterial for charge transfer in biosensors. For cathodic photocurrent generation resulting from hole transfer in DNA, sensitivity to DNA structure and base-pair stacking has been confirmed. However, such information has not been provided for anodic photocurrent generation resulting from excess-electron transfer in DNA. In the present study, we measured the anodic photocurrent of a DNA-modified Au electrode. Our results demonstrate long-distance excess-electron transfer in DNA, which is dominated by a hopping mechanism, and the photocurrent generation is sequence dependent.

Excess-Electron Transfer in DNA by a Fluctuation-Assisted Hopping Mechanism.

The dynamics of excess-electron transfer in DNA has attracted the attention of scientists from all kinds of research fields because of its importance in biological processes. To date, several studies on excess-electron transfer in consecutive adenine (A):thymine (T) sequences in donor-DNA-acceptor systems have been published. However, the reported excess-electron transfer rate constants for consecutive T's are in the range of 10(10)-10(11) s(-1) depending on the photosensitizing electron donor, which provides various driving forces for excess-electron injection into DNA. In this study, we employed a strongly electron-donating photosensitizer, a dimer of 3,4-ethylenedioxythiophene (2E), and an electron acceptor, diphenylacetylene (DPA), to synthesize a series of modified DNA oligomers (2-Tn, n = 3-6) in order to investigate the excess-electron transfer dynamics in these donor-DNA-acceptor systems using femtosecond laser flash photolysis. The relation between the free energy change for charge injection and the excess-electron transfer rate among consecutive T's provided an intrinsic excess-electron hopping rate constant of (3.8 ± 1.5) × 10(10) s(-1) in the DNA, which is consistent with the fluctuation frequency of the DNA sugar backbone and bases (3.3 × 10(10) s(-1)). Thus, we discuss the effect of structural fluctuations on the excess-electron hopping in DNA.

Dynamics of Excess-Electron Transfer through Alternating Adenine:Thymine Sequences in DNA.

This paper presents the results of an investigation into the sequence-dependent excess-electron transfer (EET) dynamics in DNA, which plays an important role in DNA damage/repair. There are many published studies on EET in consecutive adenine:thymine (A:T) sequences (Tn), but those in alternating A:T sequences (ATn) remain limited. Here, two series of functionalized DNA oligomers, Tn and ATn, were synthesized with a strongly electron-donating photosensitizer, a trimer of ethylenedioxythiophene (3 E), and an electron acceptor, diphenylacetylene (DPA). Laser flash photolysis experiments showed that the EET rate constant of AT3 is two times lower than that of T3 due to the lack of π-stacking of Ts in AT3. Thus, it was indicated that excess-electron hopping is affected by the interaction between LUMOs of nucleotides.

How Does Guanine-Cytosine Base Pair Affect Excess-Electron Transfer in DNA?

Charge transfer and proton transfer in DNA have attracted wide attention due to their relevance in biological processes and so on. Especially, excess-electron transfer (EET) in DNA has strong relation to DNA repair. However, our understanding on EET in DNA still remains limited. Herein, by using a strongly electron-donating photosensitizer, trimer of 3,4-ethylenedioxythiophene (3E), and an electron acceptor, diphenylacetylene (DPA), two series of functionalized DNA oligomers were synthesized for investigation of EET dynamics in DNA. The transient absorption measurements during femtosecond laser flash photolysis showed that guanine:cytosine (G:C) base pair affects EET dynamics in DNA by two possible mechanisms: the excess-electron quenching by proton transfer with the complementary G after formation of C(•-) and the EET hindrance by inserting a G:C base pair as a potential barrier in consecutive thymines (T's). In the present paper, we provided useful information based on the direct kinetic measurements, which allowed us to discuss EET through oligonucleotides for the investigation of DNA damage/repair.

Driving force dependence of charge separation and recombination processes in dyads of nucleotides and strongly electron-donating oligothiophenes.

Charge transfer in DNA has attracted great attention of scientists because of its importance in biological processes. However, our knowledge on excess-electron transfer in DNA still remains limited in comparison to numerous studies of hole transfer in DNA. To clarify the dynamics of excess-electron transfer in DNA by photochemical techniques, new electron-donating photosensitizers should be developed. Herein, a terthiophene and two 3,4-ethylenedioxythiophene oligomers were used as photosensitizers in dyads including natural nucleobases as electron acceptors. The charge separation and recombination processes in the dyads were investigated by femtosecond laser flash photolysis, and the driving force dependence of these rate constants was discussed on the basis of the Marcus theory. From this study, the conformation effect on charge recombination process was found. We expect that 3,4-ethylenedioxythiophene oligomers are useful in investigation of excess-electron-transfer dynamics in DNA.

Isotruxene-derived cone-shaped organic dyes for dye-sensitized solar cells.

The synthesis, electronic properties, and performance in dye-sensitized solar cells (DSSCs) of four cone-shaped organic dyes (ITD, ITD-Th, ITD-Hx, and ITD-OM) containing the isotruxene π-scaffold are reported. Selective substitution of the unsymmetrical isotruxene core with two diarylamino donors and one cyanocarboxylic acid acceptor was achieved by using a prefunctionalized dibromoisotruxene building block. The ortho-para-branched isotruxene core allows strong electronic couplings among the donors and the acceptor, leading to red-shifted absorption profiles with significant charge-transfer character. All four isotruxene dyes display reversible anodic waves in cyclic voltammagrams with both HOMO and LUMO potentials suitable for application in DSSCs. The DSSCs fabricated with these cone-shaped organic dyes exhibited high open-circuit voltages (0.67-0.76 V) and fill factors (0.67-0.72) with a power conversion efficiency (η) up to 5.45%, which is 80% of the ruthenium dye N719-based standard cell fabricated and measured under the same conditions.

Facile multistep synthesis of isotruxene and isotruxenone.

Three multistep approaches toward facile syntheses of isotruxene (1) and isotruxenone (3) are reported. The ortho-para conjugated backbone in the precursor 4 was constructed by either Co-catalyzed [2 + 2 + 2] cyclotrimerization or the [4 + 2] Diels-Alder reactions. The regioselectivity of the triple intramolecular Friedel-Crafts acylation of 4 plays the key role in determining the overall yield. Compared to the previous one-step method, the current approaches are more efficient in terms of product yield (27-36% vs 4-18%) and purification (i.e., free of column chromatography).

An E-learning Content Authoring tool for Transforming DICOM into SCORM.

Today e-learning is not impossible, and it becomes a generation of next education technology. Now e-learning has two directions of developing: the one is the construction of Learning Management System (LMS); and the other is the developing reusable content. Our studies focus on the developing content. Now the medical image information system of hospital usually is Picture Archiving and Communication System (PACS). In PACS, the form of information and image are HL7 and DICOM; for the reusability of content, we decide SCORM to be our conformant. However, the forms of data have difference between SCORM, and DICOM, so in our studies, we will design an authoring tool that can transform the information from DICOM image into the SCORM course.

The effect of Ca/P concentration and temperature of simulated body fluid on the growth of hydroxyapatite coating on alkali-treated 316L stainless steel.

316L-SS is one of the important materials both in orthopaedics and dentistry for bone screw/plate, intra-medullary rod, fixation wire, HIP joint, and knee joint. However, the biocompatibility and bone-bonding ability troubled researches for years. In the study, a simple chemical method was tried so as to establish and induce a bioactive HA layer on the surface of 316L stainless steel. When the metallic substrates treated with 10 M NaOH aqueous solution and subsequently heated at 600 degrees C, a thin sodium chromium oxide layer was formed on the surfaces as the linking layer for HA and 316L-SS. After 316L-SS treated with alkali solution, it would soak into a simulated body fluid with higher concentration of calcium and phosphorous ions to increase the possibility of nucleation of HA. However, the iron oxide and iron chromium oxides were formed on the surface when calcium and phosphorous ions increased. This resulted in loosening the HA layer. When the alkali-treated 316L-SS was soaked into SBF at a temperature of 80 degrees C, it could form a dense and uniform bone-like hydroxyapatite layer on the surface. In the research, the mechanism of the formation of sodium chromium oxide and HA would also be described by the analysis of X-ray diffractometer, scanning electron microscope, energy-dispersion spectrophotometer, and Fourier transformation infrared.